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Lag0000702 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000702
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationchr4:13553320..13553649
RNA-Seq ExpressionLag0000702
SyntenyLag0000702
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056655.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]7.8e-3372.48Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MSPI KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+R+D  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GERENAVST
         +RENAVS+
Subjt:  GERENAVST
KAG6607102.1 hypothetical protein SDJN03_00444, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4091Show/hide
Query:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERENAVS
        +SWKQSTRR VLRSRYGSRILRARRIHKNGGKACSSDVSARLE LQSLIPT+N+G G HRR+EELFQETADYIVLLKNQVFVLQRLIEFYGS ERENAVS
Subjt:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERENAVS
KAG7036793.1 hypothetical protein SDJN02_00413, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-3585Show/hide
Query:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERENAVS
        +SWKQSTRR VLRSRYGSRILRARRIHKNGGKACSSDVSARLE LQSLIPT+N+G G HRR+EELFQETADYI      VFVLQRLIEFYGS ERENAVS
Subjt:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERENAVS
PQQ13412.1 uncharacterized protein Pyn_32000 [Prunus yedoensis var. nudiflora]1.3e-1453.27Show/hide
Query:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF
        +P   K  ++ ++ TRRT  R R GSR   A RR   NGG   K  S  VSA+LETL+SLI + +  G   +AEELFQETADYIVLL+ QV +LQRL+E 
Subjt:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGERE
        YGS E+E
Subjt:  YGSGERE
TYK04615.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]6.6e-3271.56Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MS I KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+R+D  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GERENAVST
         +RENAVS+
Subjt:  GERENAVST
TrEMBL top hitse value%identityAlignment
A0A314YX88 Uncharacterized protein6.1e-1553.27Show/hide
Query:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF
        +P   K  ++ ++ TRRT  R R GSR   A RR   NGG   K  S  VSA+LETL+SLI + +  G   +AEELFQETADYIVLL+ QV +LQRL+E 
Subjt:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGERE
        YGS E+E
Subjt:  YGSGERE
A0A5A7UT08 Transcription factor UPBEAT1-like3.8e-3372.48Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MSPI KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+R+D  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GERENAVST
         +RENAVS+
Subjt:  GERENAVST
A0A5D3BZU8 Transcription factor UPBEAT1-like3.2e-3271.56Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MS I KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+R+D  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GERENAVST
         +RENAVS+
Subjt:  GERENAVST
A0A6J5UGL2 Uncharacterized protein1.4e-1451.85Show/hide
Query:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF
        +P   K  ++ ++ TRR   R R GSR   A RR   NGG   K  S  VSA+LETL+SLI + +  G   +A+ELFQETADYIVLL+ QV +LQRL+E 
Subjt:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGEREN
        YGS E+EN
Subjt:  YGSGEREN
F6H405 Uncharacterized protein5.2e-1451.43Show/hide
Query:  PITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGE
        PI K  R   ++   R   R R GSR         NGG + SS VS +LE L+SL+P  N   G  +A++LFQETADYIVLL+ QV +LQRLI+FYGSG 
Subjt:  PITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGE

Query:  RENAV
         ENAV
Subjt:  RENAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein1.2e-0743.68Show/hide
Query:  KQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTR-NDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFY
        K  T R   R+   SR         NG       V  +L  L+SL+P   N GGG    EELFQETA+YIV L+ QV VL++LIE Y
Subjt:  KQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTR-NDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFY
AT5G39240.1 unknown protein1.6e-0738.54Show/hide
Query:  RSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIP--------TRNDG-----GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERE
        RSR G R  +     +  G       S +L+ L+SL+P        +R D            E+LFQETADYIV L+ QV VLQ+LIE YGS +++
Subjt:  RSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIP--------TRNDG-----GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCCATTACAAAGAAACACAGAATATCATGGAAGCAATCGACGAGAAGAACGGTTTTGCGATCGAGGTACGGTTCTCGTATCCTCAGAGCTCGAAGAATCCACAA
AAATGGCGGAAAGGCGTGCTCCTCAGACGTATCGGCGAGGCTTGAGACGCTCCAGAGCCTCATTCCGACTCGTAACGACGGCGGAGGTCATCGGAGAGCGGAGGAGTTGT
TTCAAGAGACGGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTTTGCAGAGGCTGATCGAGTTTTACGGATCCGGTGAGAGAGAAAACGCCGTATCAACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCCATTACAAAGAAACACAGAATATCATGGAAGCAATCGACGAGAAGAACGGTTTTGCGATCGAGGTACGGTTCTCGTATCCTCAGAGCTCGAAGAATCCACAA
AAATGGCGGAAAGGCGTGCTCCTCAGACGTATCGGCGAGGCTTGAGACGCTCCAGAGCCTCATTCCGACTCGTAACGACGGCGGAGGTCATCGGAGAGCGGAGGAGTTGT
TTCAAGAGACGGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTTTGCAGAGGCTGATCGAGTTTTACGGATCCGGTGAGAGAGAAAACGCCGTATCAACGTAG
Protein sequenceShow/hide protein sequence
MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLETLQSLIPTRNDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGERENAVST