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Lag0000712 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000712
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr4:13799277..13799732
RNA-Seq ExpressionLag0000712
SyntenyLag0000712
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452162.1 PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]4.6e-1541.18Show/hide
Query:  DDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSSTSSLQTQ-----GRFHQNIDVAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQY
        +D DV W ++ ++++     +L+V Y   LS+ L +     SS+SS QTQ     GRF +N+D++K+  +F + V DMFS K   +  +  IALRDNFQY
Subjt:  DDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSSTSSLQTQ-----GRFHQNIDVAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQY

Query:  KTVKSNHEKLAVRCVVENC
         T+KSN+E + ++CV+ENC
Subjt:  KTVKSNHEKLAVRCVVENC

XP_008461035.1 PREDICTED: uncharacterized protein LOC103499740 [Cucumis melo]1.5e-0548.21Show/hide
Query:  VAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC
        ++K+   F + V DMFS K  ++  +  IALRDNFQY TVKSN E + ++C +ENC
Subjt:  VAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]3.4e-3451.66Show/hide
Query:  DTVMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIK
        + +M  LG+ G+ D PD+FA +G   FI+K MK+ DD+DV W +N +SN +  CCSLVVD RN LS ILD M +  SS+  + +Q+ G+F++ IDVA I 
Subjt:  DTVMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIK

Query:  DDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC
          FHI V+D F GK NLQNAL S+A+R NF ++TVKSN E L V C+  NC
Subjt:  DDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]2.4e-3249.66Show/hide
Query:  VMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDD
        +M +LG+ G+ D PD+F+ IG   F+ K MK+ DD+DV W +N + N  + CCSLVVD RN LS +LD M +  SS+  + + + G+FH +IDV  I  +
Subjt:  VMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDD

Query:  FHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC
        FHI V+D F GK NLQNAL S+A+RDNFQ++T+KSN + L VR  ++NC
Subjt:  FHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC

XP_022159005.1 uncharacterized protein LOC111025451 [Momordica charantia]2.3e-2750.37Show/hide
Query:  MLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDDF
        M  L + G+ D P++F+ IG   FI+K MK+ DD+DV W  N   N +  CCSLVVD RN LS +LD M +  SS+  + + + G+FH +IDVA I  +F
Subjt:  MLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDDF

Query:  HINVDDMFSGKINLQNALCSIALRDNFQYKTVKSN
        HI V+D F G  NLQNAL S+A+RDNFQ++T+KSN
Subjt:  HINVDDMFSGKINLQNALCSIALRDNFQYKTVKSN

TrEMBL top hitse value%identityAlignment
A0A1S3BT85 uncharacterized protein LOC1034932672.2e-1541.18Show/hide
Query:  DDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSSTSSLQTQ-----GRFHQNIDVAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQY
        +D DV W ++ ++++     +L+V Y   LS+ L +     SS+SS QTQ     GRF +N+D++K+  +F + V DMFS K   +  +  IALRDNFQY
Subjt:  DDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSSTSSLQTQ-----GRFHQNIDVAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQY

Query:  KTVKSNHEKLAVRCVVENC
         T+KSN+E + ++CV+ENC
Subjt:  KTVKSNHEKLAVRCVVENC

A0A1S3CF11 uncharacterized protein LOC1034997407.2e-0648.21Show/hide
Query:  VAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC
        ++K+   F + V DMFS K  ++  +  IALRDNFQY TVKSN E + ++C +ENC
Subjt:  VAKIKDDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC

A0A6J1C328 uncharacterized protein LOC1110069941.6e-3451.66Show/hide
Query:  DTVMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIK
        + +M  LG+ G+ D PD+FA +G   FI+K MK+ DD+DV W +N +SN +  CCSLVVD RN LS ILD M +  SS+  + +Q+ G+F++ IDVA I 
Subjt:  DTVMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIK

Query:  DDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC
          FHI V+D F GK NLQNAL S+A+R NF ++TVKSN E L V C+  NC
Subjt:  DDFHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC

A0A6J1DNQ8 uncharacterized protein LOC1110223471.2e-3249.66Show/hide
Query:  VMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDD
        +M +LG+ G+ D PD+F+ IG   F+ K MK+ DD+DV W +N + N  + CCSLVVD RN LS +LD M +  SS+  + + + G+FH +IDV  I  +
Subjt:  VMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDD

Query:  FHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC
        FHI V+D F GK NLQNAL S+A+RDNFQ++T+KSN + L VR  ++NC
Subjt:  FHINVDDMFSGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENC

A0A6J1DXF3 uncharacterized protein LOC1110254511.1e-2750.37Show/hide
Query:  MLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDDF
        M  L + G+ D P++F+ IG   FI+K MK+ DD+DV W  N   N +  CCSLVVD RN LS +LD M +  SS+  + + + G+FH +IDVA I  +F
Subjt:  MLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSST--SSLQTQGRFHQNIDVAKIKDDF

Query:  HINVDDMFSGKINLQNALCSIALRDNFQYKTVKSN
        HI V+D F G  NLQNAL S+A+RDNFQ++T+KSN
Subjt:  HINVDDMFSGKINLQNALCSIALRDNFQYKTVKSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACTGTAATGTTACGGTTAGGAATTTCAGGTAACTATGATTGTCCGGATCTATTTGCTAGCATAGGACTGCAATCTTTCATAGAAAAGGGTATGAAATTGGGGGA
TGATCGAGATGTAAGCTGGTTTTTTAACACAATGTCCAATAGTTCATCCAATTGTTGTTCACTAGTAGTAGATTATAGAAATAGCCTATCGGTCATATTGGATAACATGC
TTCTCCAAGATTCTAGCACTAGTTCCTTACAAACTCAGGGTCGATTTCATCAAAATATTGATGTTGCAAAAATTAAGGACGATTTTCACATAAACGTAGATGACATGTTT
AGTGGAAAGATTAATTTACAGAATGCATTGTGTTCCATTGCATTGAGGGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGCTGTCAGATGTGTTGT
CGAAAATTGCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACTGTAATGTTACGGTTAGGAATTTCAGGTAACTATGATTGTCCGGATCTATTTGCTAGCATAGGACTGCAATCTTTCATAGAAAAGGGTATGAAATTGGGGGA
TGATCGAGATGTAAGCTGGTTTTTTAACACAATGTCCAATAGTTCATCCAATTGTTGTTCACTAGTAGTAGATTATAGAAATAGCCTATCGGTCATATTGGATAACATGC
TTCTCCAAGATTCTAGCACTAGTTCCTTACAAACTCAGGGTCGATTTCATCAAAATATTGATGTTGCAAAAATTAAGGACGATTTTCACATAAACGTAGATGACATGTTT
AGTGGAAAGATTAATTTACAGAATGCATTGTGTTCCATTGCATTGAGGGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGCTGTCAGATGTGTTGT
CGAAAATTGCAGTTGA
Protein sequenceShow/hide protein sequence
MDTVMLRLGISGNYDCPDLFASIGLQSFIEKGMKLGDDRDVSWFFNTMSNSSSNCCSLVVDYRNSLSVILDNMLLQDSSTSSLQTQGRFHQNIDVAKIKDDFHINVDDMF
SGKINLQNALCSIALRDNFQYKTVKSNHEKLAVRCVVENCS