; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000717 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000717
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr4:13985611..13986399
RNA-Seq ExpressionLag0000717
SyntenyLag0000717
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]6.7e-2230.52Show/hide
Query:  FVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNV-MQTLERICVGAWSIWNDRNN
        F+W+ F++ +P+M NL    +  N  C +C ++ ETTDHALF+C RA+++W ++ P           ++D  L L  ++     + + VG W+IWNDRN 
Subjt:  FVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNV-MQTLERICVGAWSIWNDRNN

Query:  VIHMRPIPSFIDRCEWINEYLIEF-LRANPKGGHYAQTEEDIIKIISEGEDF---------IMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQVC
        +   R IP    R +WI  Y+ +F +R  P  G + + +ED        E++          ++ DAA    Q   GIG++ RN++G + A         
Subjt:  VIHMRPIPSFIDRCEWINEYLIEF-LRANPKGGHYAQTEEDIIKIISEGEDF---------IMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQVC

Query:  NSPLGAEAIAVLE
        + PL AE++A+ +
Subjt:  NSPLGAEAIAVLE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.8e-2028.63Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIK--DRWLSLANNV-MQTLERICV
        + VP+K+K F+W++ H  IPT  NL    +     C IC +  E+  HA F C RA+ IW  ++ P +  +  + +I   + W SL   +  + L    +
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIK--DRWLSLANNV-MQTLERICV

Query:  GAWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKII-----SEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQK
          W IWNDRN++IH + +     +CEW+  +L    +A     +  +T+ +   ++     S      ++TDAA  GA +    G I+R+    L A   
Subjt:  GAWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKII-----SEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQK

Query:  SGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEK
               SPL AE   +LE ++ A       L V S SL  I ++  +
Subjt:  SGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEK

XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]8.8e-2226.62Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQT-LERICVGA
        +++PSK++ FVWK FHN++P    L   H+     CP+C    ET +HALF CTRA+D+W          +       D  L ++ N   T  E+  V  
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQT-LERICVGA

Query:  WSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGED-----------------FIMHTDAALVGAQSFCGIGVILRN
        WSIW +RN   H +P        ++   YL+++  A     H A +        S  ++                   +++DAA   A    GIG ++R+
Subjt:  WSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGED-----------------FIMHTDAALVGAQSFCGIGVILRN

Query:  KQGYLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVLKIF
          G + A      Q C  P   EA+A+   ++ A  L ++   + + SL ++  L       +   +IL D+  L  F
Subjt:  KQGYLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVLKIF

XP_030964220.1 uncharacterized protein LOC115985421 [Quercus lobata]6.3e-2029.62Show/hide
Query:  RVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLS-LANNVMQTLERICVGAW
        +VP K+K F W+T  N +PTM NL +  +     CP+C + FETT HAL  C  A+  WG  +   ++      D+ D  L  +A      LE     AW
Subjt:  RVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLS-LANNVMQTLERICVGAW

Query:  SIWNDRNNVIH----MRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQ
        S+W +RN  IH      P+ ++   C+ I EY     +A      +AQ     I        + ++TDAA    +    IGV++R  +G + A       
Subjt:  SIWNDRNNVIH----MRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQ

Query:  VCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEAC--IAMILWDI
         C S   +EAI VLE + L  +++V+ + + S +L++I  +N+   G     I   +W++
Subjt:  VCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEAC--IAMILWDI

XP_030964645.1 uncharacterized protein LOC115985893 [Quercus lobata]3.2e-2431.01Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIW---GLIYPPMMENIGEKQDIKDRWLSLANNVMQTLER---
        +RVP+K++SF W+   N +PT  NL    +  + IC +C    ETT H L+ C RA+++W   GL    +M+   E  D+    +  A NV Q  E    
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIW---GLIYPPMMENIGEKQDIKDRWLSLANNVMQTLER---

Query:  -ICVGAWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKS
         + + AW IW +RN V H +         +W   YL ++L AN     Y ++ E +   + +   F  + D A+   Q   G+GV++R+  G   AV  +
Subjt:  -ICVGAWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKS

Query:  GSQVCNSPLGA---EAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIA
         S+   +PLGA   EA A+ E +  AW + +      S SLT++N +   T+  + IA
Subjt:  GSQVCNSPLGA---EAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIA

TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145783.3e-2230.52Show/hide
Query:  FVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNV-MQTLERICVGAWSIWNDRNN
        F+W+ F++ +P+M NL    +  N  C +C ++ ETTDHALF+C RA+++W ++ P           ++D  L L  ++     + + VG W+IWNDRN 
Subjt:  FVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNV-MQTLERICVGAWSIWNDRNN

Query:  VIHMRPIPSFIDRCEWINEYLIEF-LRANPKGGHYAQTEEDIIKIISEGEDF---------IMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQVC
        +   R IP    R +WI  Y+ +F +R  P  G + + +ED        E++          ++ DAA    Q   GIG++ RN++G + A         
Subjt:  VIHMRPIPSFIDRCEWINEYLIEF-LRANPKGGHYAQTEEDIIKIISEGEDF---------IMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQVC

Query:  NSPLGAEAIAVLE
        + PL AE++A+ +
Subjt:  NSPLGAEAIAVLE

A0A6J1DX30 uncharacterized protein LOC1110248742.3e-2028.63Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIK--DRWLSLANNV-MQTLERICV
        + VP+K+K F+W++ H  IPT  NL    +     C IC +  E+  HA F C RA+ IW  ++ P +  +  + +I   + W SL   +  + L    +
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIK--DRWLSLANNV-MQTLERICV

Query:  GAWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKII-----SEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQK
          W IWNDRN++IH + +     +CEW+  +L    +A     +  +T+ +   ++     S      ++TDAA  GA +    G I+R+    L A   
Subjt:  GAWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKII-----SEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQK

Query:  SGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEK
               SPL AE   +LE ++ A       L V S SL  I ++  +
Subjt:  SGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEK

A0A7N2MTJ9 Uncharacterized protein1.2e-1926.82Show/hide
Query:  VPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKD-RWLSLA---NNVMQTLERICVG
        +P KV+ F W+   + +PT VNL    V  +  C  C  E ETT H  + C RA+++W       + N    Q  +D  W  L    ++V +  + +C+ 
Subjt:  VPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKD-RWLSLA---NNVMQTLERICVG

Query:  AWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGED-FIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQV
        AW++W++RN + H     S  +   W ++Y+ E+  A       A   + +   I   E+ F ++ D A+   Q   G+GVI+R+++G L+A     S+ 
Subjt:  AWSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGED-FIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQV

Query:  CNSPLG---AEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIK
          +PLG   AEA+A  + +  A  + ++   +   SL + + L E +   + +A ++  I+
Subjt:  CNSPLG---AEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIK

A0A803NJJ8 Uncharacterized protein1.2e-1924.63Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQT-LERICVGA
        +++PSK++ FVWK FHN+IP    L   H+     CP+C ++ ET  HALF CTRA+++W L    +   +      ++     ++N   +  E+     
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQT-LERICVGA

Query:  WSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGE--------------DFIMHTDAALVGAQSFCGIGVILRNKQG
        WSIW +RN   H +          +  +YL ++  A  +          I    S  +               F ++TDAA   A    G+G +LR+  G
Subjt:  WSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGE--------------DFIMHTDAALVGAQSFCGIGVILRNKQG

Query:  YLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVL
         ++A      + C      EA A++  ++    L +    + + SL ++  L   +   +    IL D+  L
Subjt:  YLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVL

A0A803QJN9 Uncharacterized protein4.2e-2226.62Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQT-LERICVGA
        +++PSK++ FVWK FHN++P    L   H+     CP+C    ET +HALF CTRA+D+W          +       D  L ++ N   T  E+  V  
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQT-LERICVGA

Query:  WSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGED-----------------FIMHTDAALVGAQSFCGIGVILRN
        WSIW +RN   H +P        ++   YL+++  A     H A +        S  ++                   +++DAA   A    GIG ++R+
Subjt:  WSIWNDRNNVIHMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGED-----------------FIMHTDAALVGAQSFCGIGVILRN

Query:  KQGYLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVLKIF
          G + A      Q C  P   EA+A+   ++ A  L ++   + + SL ++  L       +   +IL D+  L  F
Subjt:  KQGYLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLKVNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVLKIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein2.2e-1024.36Show/hide
Query:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMME--NIGEKQDIKDRWL---SLANNVMQTLERI
        ++   K+K F+WK    ++ T  NL+  H+  +  C  C +E ET+ H  F C  AQ +W     P  E    G   + K   L    LAN   Q     
Subjt:  MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMME--NIGEKQDIKDRWL---SLANNVMQTLERI

Query:  CVGAWSIWNDRNNVIHMRPIPSF----------IDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHT-DAALVGAQSFCGIGVILRNKQ
            W +W  RN ++  +   S+          +   E  N Y ++ L        + Q      K       +I +  D A          G ++R++ 
Subjt:  CVGAWSIWNDRNNVIHMRPIPSF----------IDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHT-DAALVGAQSFCGIGVILRNKQ

Query:  G-YLQAVQKSGSQVCNSPLGAEAIAVLERMRLAW
        G Y+ + Q  GS   +S L +E  A++  M+ AW
Subjt:  G-YLQAVQKSGSQVCNSPLGAEAIAVLERMRLAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTGCCGAGCAAAGTGAAAAGCTTTGTTTGGAAAACTTTCCACAACTCCATTCCAACCATGGTTAATTTGCAAAACCATCATGTACCAGTCAACGGAATATGCCC
GATTTGTTACGAGGAGTTTGAGACGACAGATCATGCTCTTTTCCAATGTACAAGGGCTCAAGATATATGGGGTTTGATTTATCCACCTATGATGGAGAATATAGGGGAAA
AACAGGATATCAAAGACAGATGGTTGAGTTTGGCTAATAACGTGATGCAGACCCTTGAACGTATATGTGTGGGTGCTTGGTCAATCTGGAACGACAGAAATAATGTGATT
CATATGCGTCCTATTCCTAGTTTTATCGACAGATGTGAATGGATAAATGAATATTTGATAGAGTTCTTGAGGGCCAATCCGAAAGGTGGTCATTACGCCCAAACGGAGGA
AGATATAATCAAAATAATTTCAGAAGGAGAAGATTTCATAATGCATACTGATGCAGCGTTAGTTGGTGCTCAAAGTTTTTGTGGGATTGGAGTTATATTGAGAAACAAAC
AGGGGTATCTTCAAGCGGTACAAAAGTCAGGTTCTCAAGTTTGCAACTCTCCTTTAGGGGCGGAAGCGATAGCGGTGCTCGAGAGGATGCGTCTTGCTTGGAGGTTGAAG
GTGAATCGTCTCACGGTTCTATCTTATTCTTTGACGATGATAAACATTCTAAATGAGAAGACGGAAGGGGAGGCATGCATAGCTATGATTTTATGGGATATCAAAGTTCT
TAAAATTTTTTTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTGCCGAGCAAAGTGAAAAGCTTTGTTTGGAAAACTTTCCACAACTCCATTCCAACCATGGTTAATTTGCAAAACCATCATGTACCAGTCAACGGAATATGCCC
GATTTGTTACGAGGAGTTTGAGACGACAGATCATGCTCTTTTCCAATGTACAAGGGCTCAAGATATATGGGGTTTGATTTATCCACCTATGATGGAGAATATAGGGGAAA
AACAGGATATCAAAGACAGATGGTTGAGTTTGGCTAATAACGTGATGCAGACCCTTGAACGTATATGTGTGGGTGCTTGGTCAATCTGGAACGACAGAAATAATGTGATT
CATATGCGTCCTATTCCTAGTTTTATCGACAGATGTGAATGGATAAATGAATATTTGATAGAGTTCTTGAGGGCCAATCCGAAAGGTGGTCATTACGCCCAAACGGAGGA
AGATATAATCAAAATAATTTCAGAAGGAGAAGATTTCATAATGCATACTGATGCAGCGTTAGTTGGTGCTCAAAGTTTTTGTGGGATTGGAGTTATATTGAGAAACAAAC
AGGGGTATCTTCAAGCGGTACAAAAGTCAGGTTCTCAAGTTTGCAACTCTCCTTTAGGGGCGGAAGCGATAGCGGTGCTCGAGAGGATGCGTCTTGCTTGGAGGTTGAAG
GTGAATCGTCTCACGGTTCTATCTTATTCTTTGACGATGATAAACATTCTAAATGAGAAGACGGAAGGGGAGGCATGCATAGCTATGATTTTATGGGATATCAAAGTTCT
TAAAATTTTTTTGAGATAG
Protein sequenceShow/hide protein sequence
MRVPSKVKSFVWKTFHNSIPTMVNLQNHHVPVNGICPICYEEFETTDHALFQCTRAQDIWGLIYPPMMENIGEKQDIKDRWLSLANNVMQTLERICVGAWSIWNDRNNVI
HMRPIPSFIDRCEWINEYLIEFLRANPKGGHYAQTEEDIIKIISEGEDFIMHTDAALVGAQSFCGIGVILRNKQGYLQAVQKSGSQVCNSPLGAEAIAVLERMRLAWRLK
VNRLTVLSYSLTMINILNEKTEGEACIAMILWDIKVLKIFLR