; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000745 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000745
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:15004582..15005091
RNA-Seq ExpressionLag0000745
SyntenyLag0000745
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]2.4e-2838.55Show/hide
Query:  EDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFDR
        E+L+ +  +  L  EE  ++  G    V     +  C+VGK+  ++ V  E  R  M+ AWR    T++ES G+N+F  +F SK EK R++  GPW FDR
Subjt:  EDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFDR

Query:  SLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
        SL+++ EP   G V   +F    FWVQ+HN+P+    KE+ Q +GG+IG V+EV     G+ MG F
Subjt:  SLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.8e-3743.11Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+++   W  +K T++E E V    G  +L+  ++ LCVV K+ +SKR++ E  R VMK+ WR H +TR E  G N++ I F+S  EK RV+S+GPW F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
        +SL++L  P +    LD+ FN CAFW+Q+HN+P    + EMA  LG K+G VEE+ G     W G F
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.5e-3038.32Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+++   W ++ LT E+ E +       +++  ++    VGK+ +SKR++VE FR VMK+ W+ H +T IE+AG NL+ I F+S  EK RV+++GPW+F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
         SL++L  P +     D+ FN  A W+Q+H +P +   K+MA+ LG +IG VEE+  +   +W G F
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.0e-3542.51Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+D+   W ++ L  EE + +       +L++ ++ LC VGK+  SKR+ VE F  VMK  W+ H +TRIE+AG N++ I F++  EK+RV S GPW FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
        +SL+IL    +A   LD++ + CAFWVQ+H +     TK+MA+ LG ++G VEEV G    DW+  F
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.9e-3343.23Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+++   W ++ LT+EE E         +L+  ++ LC VGK+ +SKR++ +    VMK  W+ H +TRIE+AG N++ I F++  EK RV+S+GPW FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEV
        +SL +L  P +A   LDV+F  CAFWVQ+H +P  + T++MA+ LG ++G VEEV
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEV

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)1.6e-2537.35Show/hide
Query:  EDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFDR
        E+L+ R  + +L+DEE   V       +     L  C+VGKV  ++ V++E  +  M+  WR     +IE  GEN+F  +F S+ +K  +M  GPW FDR
Subjt:  EDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFDR

Query:  SLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
        +L+ L EP   G +   +F+  +FWVQ+H+VP+   +K+MA  LG  IG VEEV     G+  G+F
Subjt:  SLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

A0A6J1D765 uncharacterized protein LOC1110179022.3e-3743.11Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+++   W  +K T++E E V    G  +L+  ++ LCVV K+ +SKR++ E  R VMK+ WR H +TR E  G N++ I F+S  EK RV+S+GPW F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
        +SL++L  P +    LD+ FN CAFW+Q+HN+P    + EMA  LG K+G VEE+ G     W G F
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

A0A6J1DP89 uncharacterized protein LOC1110229327.2e-3138.32Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+++   W ++ LT E+ E +       +++  ++    VGK+ +SKR++VE FR VMK+ W+ H +T IE+AG NL+ I F+S  EK RV+++GPW+F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
         SL++L  P +     D+ FN  A W+Q+H +P +   K+MA+ LG +IG VEE+  +   +W G F
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

A0A6J1DVS4 uncharacterized protein LOC1110235559.7e-3642.51Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+D+   W ++ L  EE + +       +L++ ++ LC VGK+  SKR+ VE F  VMK  W+ H +TRIE+AG N++ I F++  EK+RV S GPW FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF
        +SL+IL    +A   LD++ + CAFWVQ+H +     TK+MA+ LG ++G VEEV G    DW+  F
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRF

A0A6J1DYG3 uncharacterized protein LOC1110246769.1e-3443.23Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD
        M+++   W ++ LT+EE E         +L+  ++ LC VGK+ +SKR++ +    VMK  W+ H +TRIE+AG N++ I F++  EK RV+S+GPW FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEV
        +SL +L  P +A   LDV+F  CAFWVQ+H +P  + T++MA+ LG ++G VEEV
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding3.6e-0626.58Show/hide
Query:  FRSKGEKMRVMSTGPWAFDRSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRD
        F+S+     ++  GPW+F+  + +++      S  D EF    FW+Q+  +P+R+ T  +   +G ++G   E    RD
Subjt:  FRSKGEKMRVMSTGPWAFDRSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCTGGTCAGCCGGTGGAATTCTTGGAAATTGACGGATGAGGAAGCGGAGTTGGTACGGCCAGGGGAGGGAGCTTCGGTTTTGTCGTTGGGCTCGCTAGACCT
GTGTGTGGTAGGGAAAGTCTTCTCCTCAAAGCGTGTGAATGTGGAGGATTTTCGGAAGGTTATGAAGGCAGCATGGAGAGCCCATGGGGCAACACGCATAGAATCGGCAG
GGGAGAATTTATTTGCTATTCAGTTCCGGTCCAAAGGAGAGAAGATGCGTGTGATGTCTACGGGCCCGTGGGCCTTTGACCGATCCCTTGTGATTCTAAAGGAGCCAAGG
TCTGCAGGGTCAGTTTTGGATGTAGAGTTTAATGACTGTGCCTTCTGGGTCCAGGTCCACAATGTGCCTATGCGTTGGCAAACGAAGGAGATGGCTCAACACTTAGGGGG
TAAGATTGGAACTGTGGAGGAAGTTGGCGGGTCGCGAGACGGTGACTGGATGGGCCGATTCTCCGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCTGGTCAGCCGGTGGAATTCTTGGAAATTGACGGATGAGGAAGCGGAGTTGGTACGGCCAGGGGAGGGAGCTTCGGTTTTGTCGTTGGGCTCGCTAGACCT
GTGTGTGGTAGGGAAAGTCTTCTCCTCAAAGCGTGTGAATGTGGAGGATTTTCGGAAGGTTATGAAGGCAGCATGGAGAGCCCATGGGGCAACACGCATAGAATCGGCAG
GGGAGAATTTATTTGCTATTCAGTTCCGGTCCAAAGGAGAGAAGATGCGTGTGATGTCTACGGGCCCGTGGGCCTTTGACCGATCCCTTGTGATTCTAAAGGAGCCAAGG
TCTGCAGGGTCAGTTTTGGATGTAGAGTTTAATGACTGTGCCTTCTGGGTCCAGGTCCACAATGTGCCTATGCGTTGGCAAACGAAGGAGATGGCTCAACACTTAGGGGG
TAAGATTGGAACTGTGGAGGAAGTTGGCGGGTCGCGAGACGGTGACTGGATGGGCCGATTCTCCGGATAA
Protein sequenceShow/hide protein sequence
MEDLVSRWNSWKLTDEEAELVRPGEGASVLSLGSLDLCVVGKVFSSKRVNVEDFRKVMKAAWRAHGATRIESAGENLFAIQFRSKGEKMRVMSTGPWAFDRSLVILKEPR
SAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVEEVGGSRDGDWMGRFSG