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Lag0000758 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000758
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr4:15373666..15374052
RNA-Seq ExpressionLag0000758
SyntenyLag0000758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035918.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.6e-1146.49Show/hide
Query:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS
        T SRS+ETQ  E    S +A  + +++++  +  I   EN M+D+  S S+  + E     +MSVM+TN  TSE RMVE+ KK++ML+K+VEE+DY+I+S
Subjt:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS

Query:  LKSQMESRDAAESS
        LK+ +ES DAAESS
Subjt:  LKSQMESRDAAESS

KAA0041883.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.4e-1044.74Show/hide
Query:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS
        T SRS+E Q  E      +A  +  ++++  +  I   EN  +D+  S S+  + E +   +MSVM+T+  TSE RMVE+EKK++ML+K+VEE+DY+I+S
Subjt:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS

Query:  LKSQMESRDAAESS
        LK+ +ESRDAAESS
Subjt:  LKSQMESRDAAESS

KAA0043321.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.9e-1043.36Show/hide
Query:  TCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISSL
        T SRS+E Q   +       K+  ++++  + E+   EN  +D+  S S++ N E S   +MSVM+T+  TSE+RM E+EKK++ML+K VEE+D++I+ L
Subjt:  TCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISSL

Query:  KSQMESRDAAESS
        K+ +ESRDAAESS
Subjt:  KSQMESRDAAESS

KAA0050373.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.8e-1145.61Show/hide
Query:  TCSRSKETQLEGNQTSV-IANKMLRRMTEFAQLEIATAENLMLDKF-ISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS
        T SRS+ETQ   N     +A  + ++ ++  + EI   ENL++D+  +S      E     +MSVM TN  TSE+RM E+EKKI+ML+K VEE+DY+I+S
Subjt:  TCSRSKETQLEGNQTSV-IANKMLRRMTEFAQLEIATAENLMLDKF-ISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS

Query:  LKSQMESRDAAESS
        LK+ +ES DAA+SS
Subjt:  LKSQMESRDAAESS

TYK25809.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-0943.97Show/hide
Query:  SITCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPNETSSL-GVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKI
        S T SRS++TQ  E      +A  +  +M++  +  I   EN  +++  S S++ NE   +  +MSVM+TN  TSE+RM E+EKK++ML+K VEE+D++I
Subjt:  SITCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPNETSSL-GVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKI

Query:  SSLKSQMESRDAAESS
        +SLK+ +ESR+AAESS
Subjt:  SSLKSQMESRDAAESS

TrEMBL top hitse value%identityAlignment
A0A5A7SZB7 Ty3-gypsy retrotransposon protein3.7e-1146.49Show/hide
Query:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS
        T SRS+ETQ  E    S +A  + +++++  +  I   EN M+D+  S S+  + E     +MSVM+TN  TSE RMVE+ KK++ML+K+VEE+DY+I+S
Subjt:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS

Query:  LKSQMESRDAAESS
        LK+ +ES DAAESS
Subjt:  LKSQMESRDAAESS

A0A5A7TP10 Ty3-gypsy retrotransposon protein2.4e-1043.36Show/hide
Query:  TCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISSL
        T SRS+E Q   +       K+  ++++  + E+   EN  +D+  S S++ N E S   +MSVM+T+  TSE+RM E+EKK++ML+K VEE+D++I+ L
Subjt:  TCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISSL

Query:  KSQMESRDAAESS
        K+ +ESRDAAESS
Subjt:  KSQMESRDAAESS

A0A5A7ULS4 Ty3-gypsy retrotransposon protein5.3e-1039.1Show/hide
Query:  MTYEKASSR-----NSYVGSITCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVE
        MT +KA+S      ++Y G IT  RSK   LE +Q S +A  +L+++ E  +  I   ENL+ D   S S +  + +   +MSVMM +  T+E  MVE+E
Subjt:  MTYEKASSR-----NSYVGSITCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVE

Query:  KKISMLLKMVEEKDYKISSLKSQMESRDAAESS
        +K++ L+K+VEE+D++I++L+ QM + + AESS
Subjt:  KKISMLLKMVEEKDYKISSLKSQMESRDAAESS

A0A5D3BZH1 Ty3-gypsy retrotransposon protein2.8e-1145.61Show/hide
Query:  TCSRSKETQLEGNQTSV-IANKMLRRMTEFAQLEIATAENLMLDKF-ISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS
        T SRS+ETQ   N     +A  + ++ ++  + EI   ENL++D+  +S      E     +MSVM TN  TSE+RM E+EKKI+ML+K VEE+DY+I+S
Subjt:  TCSRSKETQLEGNQTSV-IANKMLRRMTEFAQLEIATAENLMLDKF-ISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS

Query:  LKSQMESRDAAESS
        LK+ +ES DAA+SS
Subjt:  LKSQMESRDAAESS

A0A5D3C4W1 Ty3-gypsy retrotransposon protein4.1e-1044.74Show/hide
Query:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS
        T SRS+E Q  E      +A  +  ++++  +  I   EN  +D+  S S+  + E +   +MSVM+T+  TSE RMVE+EKK++ML+K+VEE+DY+I+S
Subjt:  TCSRSKETQ-LEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPN-ETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDYKISS

Query:  LKSQMESRDAAESS
        LK+ +ESRDAAESS
Subjt:  LKSQMESRDAAESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTATGAAAAAGCTTCTTCAAGAAACTCCTATGTGGGGTCAATTACTTGCAGTCGCTCCAAGGAAACACAACTCGAAGGCAACCAAACTTCTGTCATTGCAAACAA
AATGTTGAGACGCATGACAGAATTTGCCCAACTTGAAATTGCCACTGCAGAAAATCTGATGCTTGACAAATTCATCTCTCCTTCTCAGCAACCAAATGAAACATCAAGTC
TTGGCGTGATGTCTGTTATGATGACTAATGCAGGAACTAGTGAAGAACGAATGGTTGAAGTTGAGAAGAAAATTAGCATGTTACTAAAGATGGTTGAAGAGAAAGACTAC
AAAATTTCCTCTCTCAAAAGCCAAATGGAGAGTCGGGATGCTGCTGAATCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTATGAAAAAGCTTCTTCAAGAAACTCCTATGTGGGGTCAATTACTTGCAGTCGCTCCAAGGAAACACAACTCGAAGGCAACCAAACTTCTGTCATTGCAAACAA
AATGTTGAGACGCATGACAGAATTTGCCCAACTTGAAATTGCCACTGCAGAAAATCTGATGCTTGACAAATTCATCTCTCCTTCTCAGCAACCAAATGAAACATCAAGTC
TTGGCGTGATGTCTGTTATGATGACTAATGCAGGAACTAGTGAAGAACGAATGGTTGAAGTTGAGAAGAAAATTAGCATGTTACTAAAGATGGTTGAAGAGAAAGACTAC
AAAATTTCCTCTCTCAAAAGCCAAATGGAGAGTCGGGATGCTGCTGAATCAAGTTAG
Protein sequenceShow/hide protein sequence
MTYEKASSRNSYVGSITCSRSKETQLEGNQTSVIANKMLRRMTEFAQLEIATAENLMLDKFISPSQQPNETSSLGVMSVMMTNAGTSEERMVEVEKKISMLLKMVEEKDY
KISSLKSQMESRDAAESS