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Lag0000759 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000759
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:15386200..15387074
RNA-Seq ExpressionLag0000759
SyntenyLag0000759
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU33808.1 hypothetical protein TSUD_221460 [Trifolium subterraneum]7.1e-1331.71Show/hide
Query:  INEWKRFKLMDNEKEKIFTLDAEEVKESGGQA-GQSLVGKLLSRN-------------------GLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRG
        ++ WK+ +L   E+E+   ++A++++  G +   +SLVGKL + N                    + +F+E D  K+  ++G  +R++V +D+ KPL+RG
Subjt:  INEWKRFKLMDNEKEKIFTLDAEEVKESGGQA-GQSLVGKLLSRN-------------------GLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRG

Query:  FIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWK-----DGEKINKEDFEFGMWMK
         +V  +   ++  V  KYER+P FCF  GKIGH +K+C E +     + ++I +++F FG WMK
Subjt:  FIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWK-----DGEKINKEDFEFGMWMK

KAF0920597.1 hypothetical protein E2562_035741 [Oryza meyeriana var. granulata]1.2e-1233.08Show/hide
Query:  KIFTLDAEEVKESGGQAGQSLVGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIV
        ++F L    + ES G+    L+G+ +      K LE D ++  + +GN +RI+  +D+ KPL RG ++   +   +CW   KYE +P FC+ YG +GH+ 
Subjt:  KIFTLDAEEVKESGGQAGQSLVGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIV

Query:  KECAEWKDGEKINKEDFEFGMWMKFQGFSG
        KEC    DG+   ++  +FG WM+ +  +G
Subjt:  KECAEWKDGEKINKEDFEFGMWMKFQGFSG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.1e-1338Show/hide
Query:  NGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKEC-AEWKDGEKINKEDFEFGMWMKFQG
        N +  F++ D N+     G ++RIRV +DI+KPLRRG  +N +     CW+ I+YER+P+FC+  G IGH   +C A +   +  ++   E+G W++F G
Subjt:  NGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKEC-AEWKDGEKINKEDFEFGMWMKFQG

XP_023887814.1 uncharacterized protein LOC111999936 [Quercus suber]4.4e-1541.3Show/hide
Query:  VGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGM
        VGK L  N L KF+E DK    A     +RIRV L + KPLRRG  +   E  +  WVT KYER+P FCFL GK+GH  K C E  D     +   ++G 
Subjt:  VGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGM

Query:  WMKFQGFSG--KTKSSGSLRRDTNRPDNQVLNEISISR
        W++  G  G  K++S+ S  RD N  D    N  + +R
Subjt:  WMKFQGFSG--KTKSSGSLRRDTNRPDNQVLNEISISR

XP_030974055.1 uncharacterized protein LOC115994148 isoform X2 [Quercus lobata]9.2e-1339.84Show/hide
Query:  LRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMKFQGFSG
        L   LE DK    A     IR+R+ L I KPLRRG  ++ E+  E  WVT KYER+P FCFL GK+GH  K C   K+  K +++  ++G W+K     G
Subjt:  LRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMKFQGFSG

Query:  KTKSSGSLR-RDTNRPDNQVLNE
         TK  G      TNR + ++ ++
Subjt:  KTKSSGSLR-RDTNRPDNQVLNE

TrEMBL top hitse value%identityAlignment
A0A2Z6MN68 CCHC-type domain-containing protein3.4e-1331.71Show/hide
Query:  INEWKRFKLMDNEKEKIFTLDAEEVKESGGQA-GQSLVGKLLSRN-------------------GLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRG
        ++ WK+ +L   E+E+   ++A++++  G +   +SLVGKL + N                    + +F+E D  K+  ++G  +R++V +D+ KPL+RG
Subjt:  INEWKRFKLMDNEKEKIFTLDAEEVKESGGQA-GQSLVGKLLSRN-------------------GLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRG

Query:  FIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWK-----DGEKINKEDFEFGMWMK
         +V  +   ++  V  KYER+P FCF  GKIGH +K+C E +     + ++I +++F FG WMK
Subjt:  FIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWK-----DGEKINKEDFEFGMWMK

A0A6G1E7A7 Uncharacterized protein5.8e-1333.08Show/hide
Query:  KIFTLDAEEVKESGGQAGQSLVGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIV
        ++F L    + ES G+    L+G+ +      K LE D ++  + +GN +RI+  +D+ KPL RG ++   +   +CW   KYE +P FC+ YG +GH+ 
Subjt:  KIFTLDAEEVKESGGQAGQSLVGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIV

Query:  KECAEWKDGEKINKEDFEFGMWMKFQGFSG
        KEC    DG+   ++  +FG WM+ +  +G
Subjt:  KECAEWKDGEKINKEDFEFGMWMKFQGFSG

A0A6J1DU55 uncharacterized protein LOC1110231352.0e-1338Show/hide
Query:  NGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKEC-AEWKDGEKINKEDFEFGMWMKFQG
        N +  F++ D N+     G ++RIRV +DI+KPLRRG  +N +     CW+ I+YER+P+FC+  G IGH   +C A +   +  ++   E+G W++F G
Subjt:  NGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKEC-AEWKDGEKINKEDFEFGMWMKFQG

A0A7N2L6E7 CCHC-type domain-containing protein3.4e-1341.88Show/hide
Query:  NGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMK----
        N L +FLE DK    +     +RIRV L I KPLRRG  V      E  WV+ KYER+P FCFL GK+GH  K C ++ + +   K   ++G W+K    
Subjt:  NGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMK----

Query:  FQGFSGKTKSSGSLRRD
        F+G S + +S+   RRD
Subjt:  FQGFSGKTKSSGSLRRD

A0A7N2M0Q3 CCHC-type domain-containing protein4.5e-1339.84Show/hide
Query:  LRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMKFQGFSG
        L   LE DK    A     IR+R+ L I KPLRRG  ++ E+  E  WVT KYER+P FCFL GK+GH  K C   K+  K +++  ++G W+K     G
Subjt:  LRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEFCFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMKFQGFSG

Query:  KTKSSGSLR-RDTNRPDNQVLNE
         TK  G      TNR + ++ ++
Subjt:  KTKSSGSLR-RDTNRPDNQVLNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGATGATCGGATAAACGAATGGAAAAGATTCAAACTTATGGACAATGAAAAAGAGAAGATTTTTACCTTGGATGCAGAAGAAGTAAAAGAGAGTGGAGGTCA
AGCAGGCCAATCTTTGGTTGGCAAGCTGCTCTCAAGGAATGGCCTGAGGAAGTTCTTGGAGCAAGACAAGAATAAAAATTATGCTCAAATGGGGAACAATATAAGAATCA
GAGTTAGATTAGATATTTCTAAACCACTACGTAGAGGTTTTATAGTGAATACTGAGGAATCAAGCGAGTCTTGTTGGGTGACAATTAAATATGAGAGGATCCCAGAATTC
TGTTTCCTCTACGGTAAAATTGGACACATTGTCAAAGAGTGTGCGGAATGGAAGGATGGGGAAAAAATAAATAAGGAAGATTTTGAATTTGGAATGTGGATGAAGTTCCA
AGGCTTCTCAGGGAAGACCAAGAGCTCGGGTTCTTTAAGAAGAGATACTAACAGACCAGATAATCAAGTTTTGAATGAGATTTCAATTTCTAGAGAGGATCCTAGAAATA
AAGAGGGTCTGGATGTAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGGATGATCGGATAAACGAATGGAAAAGATTCAAACTTATGGACAATGAAAAAGAGAAGATTTTTACCTTGGATGCAGAAGAAGTAAAAGAGAGTGGAGGTCA
AGCAGGCCAATCTTTGGTTGGCAAGCTGCTCTCAAGGAATGGCCTGAGGAAGTTCTTGGAGCAAGACAAGAATAAAAATTATGCTCAAATGGGGAACAATATAAGAATCA
GAGTTAGATTAGATATTTCTAAACCACTACGTAGAGGTTTTATAGTGAATACTGAGGAATCAAGCGAGTCTTGTTGGGTGACAATTAAATATGAGAGGATCCCAGAATTC
TGTTTCCTCTACGGTAAAATTGGACACATTGTCAAAGAGTGTGCGGAATGGAAGGATGGGGAAAAAATAAATAAGGAAGATTTTGAATTTGGAATGTGGATGAAGTTCCA
AGGCTTCTCAGGGAAGACCAAGAGCTCGGGTTCTTTAAGAAGAGATACTAACAGACCAGATAATCAAGTTTTGAATGAGATTTCAATTTCTAGAGAGGATCCTAGAAATA
AAGAGGGTCTGGATGTAGACTGA
Protein sequenceShow/hide protein sequence
MAMDDRINEWKRFKLMDNEKEKIFTLDAEEVKESGGQAGQSLVGKLLSRNGLRKFLEQDKNKNYAQMGNNIRIRVRLDISKPLRRGFIVNTEESSESCWVTIKYERIPEF
CFLYGKIGHIVKECAEWKDGEKINKEDFEFGMWMKFQGFSGKTKSSGSLRRDTNRPDNQVLNEISISREDPRNKEGLDVD