; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000764 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000764
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr4:15439304..15440701
RNA-Seq ExpressionLag0000764
SyntenyLag0000764
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-7843.19Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNT Q+KGE V++YINRWR +SLDCKD+LTELS+VEMC Q MHWELLYILQGI+PRTFEELATRAHD++LSI++R  +D L+   +++   +  T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              + ESM+V    L+S S     K KR  +G    R TL+E  +K+Y FPD D+ DMLEQL+E QLI+LP+                         
Subjt:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIK-----------------------------------GKSKHQRKKDPKKLQPKR-----------
        +E+CFVLK+LI KLA+E KIEL++DEVAQ N   +                                      S  Q K++P + + +            
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIK-----------------------------------GKSKHQRKKDPKKLQPKR-----------

Query:  --------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFD
                                    ++DNS + +QR SVFD IK  TT  SVFQR+SM   +EENQC   T  + SAF+RL++S SKK R S   FD
Subjt:  --------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFD

Query:  RLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
        RLK+T+DQ QR++  L+ K F E N D K+ S V SRMKRK SV INT+GSL VK   II TNP +EG ++  DE+K
Subjt:  RLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

KAA0032650.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-7843.9Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNT+QQKGELV++YINRWR +SLDCKDRLTELS+VEMC Q MHW LLYILQGI+PR FEELAT AHD+ELSI++R  +D L+P  +++   ++ T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              I+ESMVV+   L+S SK K     R+ +G    + TLKE  +K+Y F D D+ DMLEQLLE QLI+L +                         
Subjt:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEV-----------------------AQPNLAT---------IKGKSKHQRK---------------KDPKKLQPK
        +E+CFVLK+LILKLA+E KIEL+ D+                         QPN             KG   H++K               KD   LQ +
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEV-----------------------AQPNLAT---------IKGKSKHQRK---------------KDPKKLQPK

Query:  R----------------------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLN
        R                                         ++V+NS +  QR SVFDRIK STT   VFQR+SM   EEENQC     TR S F+RL+
Subjt:  R----------------------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLN

Query:  VSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
        +STSKK R S S FD LK+T+DQ QR+I +L+ K F E N D K+ S V S MKRK  V INT+GSL VK   II TNPT+EG +Q   E+K
Subjt:  VSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-8849.21Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNT+QQKGELV++YINRWR +SLDCKDRLTELS+VEMC Q MHW LLYILQGI+PRTFEELATRAHD+ELSI++R  +D L+P  +++   ++ T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              I+ESMVV+   L+S SK K     R+ +G    + TLKE  +K+Y FPD D+ DMLEQLLE QLI+LP+                         
Subjt:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKR----------------------------------------KRKVDN
        +E+CFVLK+LILKLA+E KIEL++DEVAQ N A I+  S   + KD   LQ +R                                         ++V+N
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKR----------------------------------------KRKVDN

Query:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS
        S +  QR SVFDRIK STT  SVFQR+S+   EEENQC     TR S  +RL++ST KK R S S FDRLK+T+DQ QR++ + + K F E N D K+ S
Subjt:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS

Query:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
         V SRMKRK  V INT+GSL VK   II TNPT+EG +Q   E+K
Subjt:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-8146.52Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNTKQ  GE V+NYINRWR +SLDCKD+LTELS+VEMC Q MHWELLYILQGI+PRTFEELATRAHD+ELSI++R  +  L+   +++   +  T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSSKEK-------RQENGTCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIEL-------------------------PK
              + ESMVV    L+S SK K         ++   R TL+E  +K+Y FPD D+ DMLEQL+E QLI+L                           
Subjt:  ------IEESMVVNTILLESSSKEK-------RQENGTCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIEL-------------------------PK

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKRK----------------------------------------RKVDN
        +E+CFVLK+LILKLA+E KI+L++DE        IKG       KD   LQP+R                                          +VDN
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKRK----------------------------------------RKVDN

Query:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS
        S + +QR SVFDRIK  TT   VFQR+SM   EEENQC  ST TR SAF+RL++STSKK R S S FDRLK+ +DQ QR++ +L+ K F E N D K+ S
Subjt:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS

Query:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
         + S   RK SV IN +GSL VK   II TNP +EG ++  DE+K
Subjt:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.3e-7839.81Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNTKQ+KGE V++YI RWR +SLDCKD+LTELS+V+MC Q MHWELLYILQGI+PRTFEELATRAHD+ELSI++R  +D L+   +++   +  T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              + ESM V    L+S S     K KR  +G    R TL+E  +K+Y FP+ D+ DMLEQL+E QLI+LP+                         
Subjt:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATI-----------------------------------------------------------------
        +E+CFVLK+LILKLA+E KIEL++DEVAQ N   +                                                                 
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATI-----------------------------------------------------------------

Query:  ---------------KGKSKHQRK---------------KDPKKLQPKRK----------------------------------------RKVDNSEKGE
                       KG   H++K               KD   LQP+R                                          +VDNS + +
Subjt:  ---------------KGKSKHQRK---------------KDPKKLQPKRK----------------------------------------RKVDNSEKGE

Query:  QRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSR
        QR SVFDRIK  TT   VFQR+SM   EEENQC  ST  R SAF+RL++STSKK R S S FDRLK+T++Q +R++ + + K F E N D K+ S V SR
Subjt:  QRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSR

Query:  MKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
        MKRK SV INT+GSL VK   II TNP +EG ++  DE+K
Subjt:  MKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

TrEMBL top hitse value%identityAlignment
A0A5A7SP56 Retrotransposon gag protein5.3e-7943.9Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNT+QQKGELV++YINRWR +SLDCKDRLTELS+VEMC Q MHW LLYILQGI+PR FEELAT AHD+ELSI++R  +D L+P  +++   ++ T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              I+ESMVV+   L+S SK K     R+ +G    + TLKE  +K+Y F D D+ DMLEQLLE QLI+L +                         
Subjt:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEV-----------------------AQPNLAT---------IKGKSKHQRK---------------KDPKKLQPK
        +E+CFVLK+LILKLA+E KIEL+ D+                         QPN             KG   H++K               KD   LQ +
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEV-----------------------AQPNLAT---------IKGKSKHQRK---------------KDPKKLQPK

Query:  R----------------------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLN
        R                                         ++V+NS +  QR SVFDRIK STT   VFQR+SM   EEENQC     TR S F+RL+
Subjt:  R----------------------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLN

Query:  VSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
        +STSKK R S S FD LK+T+DQ QR+I +L+ K F E N D K+ S V S MKRK  V INT+GSL VK   II TNPT+EG +Q   E+K
Subjt:  VSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

A0A5A7SRE2 Ty3-gypsy retrotransposon protein6.9e-7943.19Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNT Q+KGE V++YINRWR +SLDCKD+LTELS+VEMC Q MHWELLYILQGI+PRTFEELATRAHD++LSI++R  +D L+   +++   +  T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              + ESM+V    L+S S     K KR  +G    R TL+E  +K+Y FPD D+ DMLEQL+E QLI+LP+                         
Subjt:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIK-----------------------------------GKSKHQRKKDPKKLQPKR-----------
        +E+CFVLK+LI KLA+E KIEL++DEVAQ N   +                                      S  Q K++P + + +            
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIK-----------------------------------GKSKHQRKKDPKKLQPKR-----------

Query:  --------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFD
                                    ++DNS + +QR SVFD IK  TT  SVFQR+SM   +EENQC   T  + SAF+RL++S SKK R S   FD
Subjt:  --------------------------KRKVDNSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFD

Query:  RLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
        RLK+T+DQ QR++  L+ K F E N D K+ S V SRMKRK SV INT+GSL VK   II TNP +EG ++  DE+K
Subjt:  RLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

A0A5A7URH1 Ty3-gypsy retrotransposon protein2.2e-8849.21Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNT+QQKGELV++YINRWR +SLDCKDRLTELS+VEMC Q MHW LLYILQGI+PRTFEELATRAHD+ELSI++R  +D L+P  +++   ++ T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              I+ESMVV+   L+S SK K     R+ +G    + TLKE  +K+Y FPD D+ DMLEQLLE QLI+LP+                         
Subjt:  ------IEESMVVNTILLESSSKEK-----RQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKR----------------------------------------KRKVDN
        +E+CFVLK+LILKLA+E KIEL++DEVAQ N A I+  S   + KD   LQ +R                                         ++V+N
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKR----------------------------------------KRKVDN

Query:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS
        S +  QR SVFDRIK STT  SVFQR+S+   EEENQC     TR S  +RL++ST KK R S S FDRLK+T+DQ QR++ + + K F E N D K+ S
Subjt:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS

Query:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
         V SRMKRK  V INT+GSL VK   II TNPT+EG +Q   E+K
Subjt:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

A0A5A7VFA5 Ty3-gypsy retrotransposon protein6.7e-8246.52Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNTKQ  GE V+NYINRWR +SLDCKD+LTELS+VEMC Q MHWELLYILQGI+PRTFEELATRAHD+ELSI++R  +  L+   +++   +  T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSSKEK-------RQENGTCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIEL-------------------------PK
              + ESMVV    L+S SK K         ++   R TL+E  +K+Y FPD D+ DMLEQL+E QLI+L                           
Subjt:  ------IEESMVVNTILLESSSKEK-------RQENGTCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIEL-------------------------PK

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKRK----------------------------------------RKVDN
        +E+CFVLK+LILKLA+E KI+L++DE        IKG       KD   LQP+R                                          +VDN
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKRK----------------------------------------RKVDN

Query:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS
        S + +QR SVFDRIK  TT   VFQR+SM   EEENQC  ST TR SAF+RL++STSKK R S S FDRLK+ +DQ QR++ +L+ K F E N D K+ S
Subjt:  SEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQS

Query:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
         + S   RK SV IN +GSL VK   II TNP +EG ++  DE+K
Subjt:  IVLSRMKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

A0A5D3D209 Retrotransposon gag protein4.5e-7839.81Show/hide
Query:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-
        M ELTNTKQ+KGE V++YI RWR +SLDCKD+LTELS+V+MC Q MHWELLYILQGI+PRTFEELATRAHD+ELSI++R  +D L+   +++   +  T 
Subjt:  MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVT-

Query:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------
              + ESM V    L+S S     K KR  +G    R TL+E  +K+Y FP+ D+ DMLEQL+E QLI+LP+                         
Subjt:  ------IEESMVVNTILLESSS-----KEKRQENG--TCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPK-------------------------

Query:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATI-----------------------------------------------------------------
        +E+CFVLK+LILKLA+E KIEL++DEVAQ N   +                                                                 
Subjt:  LERCFVLKDLILKLAKEGKIELNLDEVAQPNLATI-----------------------------------------------------------------

Query:  ---------------KGKSKHQRK---------------KDPKKLQPKRK----------------------------------------RKVDNSEKGE
                       KG   H++K               KD   LQP+R                                          +VDNS + +
Subjt:  ---------------KGKSKHQRK---------------KDPKKLQPKRK----------------------------------------RKVDNSEKGE

Query:  QRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSR
        QR SVFDRIK  TT   VFQR+SM   EEENQC  ST  R SAF+RL++STSKK R S S FDRLK+T++Q +R++ + + K F E N D K+ S V SR
Subjt:  QRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSR

Query:  MKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK
        MKRK SV INT+GSL VK   II TNP +EG ++  DE+K
Subjt:  MKRKFSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGCTCACCAACACTAAACAACAAAAAGGTGAACTCGTTGTTAACTACATAAATCGTTGGAGAGTCATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTC
TTCTGTTGAGATGTGCATTCAAGACATGCACTGGGAACTTCTCTACATCCTTCAAGGTATAAGGCCTCGCACCTTTGAAGAACTAGCCACTCGTGCCCACGATATTGAGC
TAAGTATTTCTAGTCGAGAAAACCAAGACCTTCTACTCCCTAACTTAAAGACAGAAGGAAAGAACGTCGAAGTGACTATAGAAGAATCTATGGTTGTAAACACAATTCTT
CTCGAGTCATCTTCAAAAGAAAAACGACAAGAAAATGGAACATGTCGCTTAACTTTAAAGGAAATATTGCAGAAAATCTATCATTTCCCTGATTGTGACATCCCTGACAT
GCTGGAACAACTACTGGAAGCACAACTGATAGAGCTTCCTAAGTTGGAAAGATGCTTCGTCCTAAAGGATTTAATTCTAAAGCTAGCTAAGGAAGGAAAAATTGAGCTCA
ACCTTGATGAAGTAGCTCAACCAAATCTTGCTACAATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAAAGTTGAC
AATTCTGAGAAGGGTGAACAAAGGATTTCCGTCTTTGATCGCATCAAGCATTCAACTACTCATCCTTCGGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAA
TCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAATGTCTCCACATCGAAGAAAATTCGATCTTCAATATCTGTCTTTGATCGCCTCAAAGTAA
CAGACGATCAACCTCAAAGAAAGATAGATAACTTAGAGGTGAAATTGTTCGATGAAGTAAACAGTGACAAGAAGCTTCAAAGTATTGTCCTGTCACGTATGAAAAGGAAG
TTCTCTGTTCACATAAATACAAAAGGTTCCTTGAAGGTGAAGTCAAATCTCATTATCCTGACTAATCCTACAAGTGAAGGATCTGATCAAGACCATGATGAAGATAAGGG
CTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGCTCACCAACACTAAACAACAAAAAGGTGAACTCGTTGTTAACTACATAAATCGTTGGAGAGTCATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTC
TTCTGTTGAGATGTGCATTCAAGACATGCACTGGGAACTTCTCTACATCCTTCAAGGTATAAGGCCTCGCACCTTTGAAGAACTAGCCACTCGTGCCCACGATATTGAGC
TAAGTATTTCTAGTCGAGAAAACCAAGACCTTCTACTCCCTAACTTAAAGACAGAAGGAAAGAACGTCGAAGTGACTATAGAAGAATCTATGGTTGTAAACACAATTCTT
CTCGAGTCATCTTCAAAAGAAAAACGACAAGAAAATGGAACATGTCGCTTAACTTTAAAGGAAATATTGCAGAAAATCTATCATTTCCCTGATTGTGACATCCCTGACAT
GCTGGAACAACTACTGGAAGCACAACTGATAGAGCTTCCTAAGTTGGAAAGATGCTTCGTCCTAAAGGATTTAATTCTAAAGCTAGCTAAGGAAGGAAAAATTGAGCTCA
ACCTTGATGAAGTAGCTCAACCAAATCTTGCTACAATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAAAGTTGAC
AATTCTGAGAAGGGTGAACAAAGGATTTCCGTCTTTGATCGCATCAAGCATTCAACTACTCATCCTTCGGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAA
TCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAATGTCTCCACATCGAAGAAAATTCGATCTTCAATATCTGTCTTTGATCGCCTCAAAGTAA
CAGACGATCAACCTCAAAGAAAGATAGATAACTTAGAGGTGAAATTGTTCGATGAAGTAAACAGTGACAAGAAGCTTCAAAGTATTGTCCTGTCACGTATGAAAAGGAAG
TTCTCTGTTCACATAAATACAAAAGGTTCCTTGAAGGTGAAGTCAAATCTCATTATCCTGACTAATCCTACAAGTGAAGGATCTGATCAAGACCATGATGAAGATAAGGG
CTTTTAA
Protein sequenceShow/hide protein sequence
MFELTNTKQQKGELVVNYINRWRVMSLDCKDRLTELSSVEMCIQDMHWELLYILQGIRPRTFEELATRAHDIELSISSRENQDLLLPNLKTEGKNVEVTIEESMVVNTIL
LESSSKEKRQENGTCRLTLKEILQKIYHFPDCDIPDMLEQLLEAQLIELPKLERCFVLKDLILKLAKEGKIELNLDEVAQPNLATIKGKSKHQRKKDPKKLQPKRKRKVD
NSEKGEQRISVFDRIKHSTTHPSVFQRMSMVATEEENQCSMSTSTRPSAFQRLNVSTSKKIRSSISVFDRLKVTDDQPQRKIDNLEVKLFDEVNSDKKLQSIVLSRMKRK
FSVHINTKGSLKVKSNLIILTNPTSEGSDQDHDEDKGF