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Lag0000770 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000770
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:15628221..15628634
RNA-Seq ExpressionLag0000770
SyntenyLag0000770
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021751074.1 uncharacterized protein LOC110716746 [Chenopodium quinoa]7.6e-1744.86Show/hide
Query:  VDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSL-EERSRTGGRVRGRFSFKFEEWWTRHEDCRRII
        VD C L+DLGY G  FTW N RG ++ +  RLDRFLAN S+C MF    VT++   +SDH+PI L + E+      + + +  ++FEE W R E+C RI+
Subjt:  VDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSL-EERSRTGGRVRGRFSFKFEEWWTRHEDCRRII

Query:  SQSGSWD
        S   +WD
Subjt:  SQSGSWD

XP_042942763.1 uncharacterized protein LOC122276942 [Carya illinoinensis]1.3e-1641.41Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII
        ++ DC+L+DLGY G  FTW N RG ED V  RLDRFLANS +C+MF + QVT+   A SDH+PI L  E       R R R  F+F+  W   ++C  II
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII

Query:  SQSGSWDANSHASFPLQHDLNACTTTLG
         +         +   +   +++C T LG
Subjt:  SQSGSWDANSHASFPLQHDLNACTTTLG

XP_042950087.1 uncharacterized protein LOC122282202 [Carya illinoinensis]5.8e-1741.41Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII
        ++ DC+L+DLGY G +FTW NRRG ED V  RLDRFLANS +C+MF + +VT+   A SDH+P+ L  E       R R R  F+FE  W    +C  II
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII

Query:  SQSGSWDANSHASFPLQHDLNACTTTLG
         +         +   +    ++C T LG
Subjt:  SQSGSWDANSHASFPLQHDLNACTTTLG

XP_042962672.1 uncharacterized protein LOC122296942 [Carya illinoinensis]2.2e-1641.41Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII
        ++ DC L+DLGY G  FTW NRRG ED V  RLDRFLANS +C+MF + +VT+   A SDH+P+ L  E       R R R  F+FE  W    +C  II
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII

Query:  SQSGSWDANSHASFPLQHDLNACTTTLG
         +         +   +   +++C T LG
Subjt:  SQSGSWDANSHASFPLQHDLNACTTTLG

XP_042974757.1 uncharacterized protein LOC122306396 [Carya illinoinensis]2.9e-1639.06Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMP-IELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRI
        ++DDC+L DLGY G  FTWCN R +   +S RLDRFLAN  + + FQ+Y V +   A S+H+P I  S  E+  T G++     F+FE  W + EDC R+
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMP-IELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRI

Query:  ISQSGSWDANSHASFPLQHDLNACTTTL
        I+ S   D   +     +  + AC+  +
Subjt:  ISQSGSWDANSHASFPLQHDLNACTTTL

TrEMBL top hitse value%identityAlignment
A0A5C7HJN1 Uncharacterized protein3.4e-1532.85Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII
        ++DDCNL DLG+ G   TW NRR  ++ V  R+DR LA++++ ++F   +V ++ +  SDH P+ LS  +  + G R   R  FKFE +W + E+C ++I
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII

Query:  SQSGSWDANSHASFPLQHDLNACTTTLGVGGSSKISA
         ++ +     H+   L+  L  C   L     +K  +
Subjt:  SQSGSWDANSHASFPLQHDLNACTTTLGVGGSSKISA

A0A6J1DY29 uncharacterized protein LOC1110252371.2e-1542.57Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII
        ++D C+L D+G+TGG FTWCN R + DQ+   LDRFL N SF ++F D  + ++ W+KSDH  I L L     +  + R     +FEE+W R+ +C ++I
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRII

Query:  S
        S
Subjt:  S

A0A803LZT1 Uncharacterized protein1.5e-1542.16Show/hide
Query:  VDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRIIS
        +D C L+D+GY G  FTW N RG  + +  RLDRFLAN  +   F    VT++   KSDH+PI L ++E   T  + + +  ++FEE W R E+C  IIS
Subjt:  VDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRIIS

Query:  QS
        ++
Subjt:  QS

A0A803MKN4 Uncharacterized protein6.9e-1641.67Show/hide
Query:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFS-FKFEEWWTRHEDCRRI
        +V  C L+DLG+ G  FTW N RG E+ +  RLDRFLAN ++ + FQ   VT++   KSDH+PI L ++E + +  + + +   ++FEE W R E+C  I
Subjt:  MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFS-FKFEEWWTRHEDCRRI

Query:  ISQSGSWD
        +S+  +WD
Subjt:  ISQSGSWD

A0A803MS51 Uncharacterized protein6.9e-1640.2Show/hide
Query:  VDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRIIS
        VD C+L+DLGY G  FTW N RG ++ +  RLDR+LAN  + ++F    V+++   KSDH+PI L ++E   T  + + +  ++FE  W R E+C  I+S
Subjt:  VDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRIIS

Query:  QS
         +
Subjt:  QS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATGATTGTAATCTCCAAGACCTCGGTTACACTGGTGGGGTTTTCACGTGGTGTAATAGGAGGGGTAGTGAGGATCAGGTGAGCCTAAGATTAGATCGATTCTT
GGCAAACTCCAGTTTTTGTAACATGTTTCAGGATTACCAGGTTACAAATATGGATTGGGCCAAGTCTGACCATATGCCTATTGAGTTGAGTTTAGAGGAGCGATCTCGTA
CTGGAGGTAGAGTTCGGGGTCGCTTTTCTTTTAAGTTCGAGGAATGGTGGACTCGGCATGAAGATTGCAGGAGGATTATATCTCAATCGGGAAGTTGGGATGCCAATAGT
CATGCTTCTTTCCCATTACAACATGATCTGAATGCTTGCACCACAACTCTGGGGGTCGGGGGTTCAAGCAAAATCAGCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATGATTGTAATCTCCAAGACCTCGGTTACACTGGTGGGGTTTTCACGTGGTGTAATAGGAGGGGTAGTGAGGATCAGGTGAGCCTAAGATTAGATCGATTCTT
GGCAAACTCCAGTTTTTGTAACATGTTTCAGGATTACCAGGTTACAAATATGGATTGGGCCAAGTCTGACCATATGCCTATTGAGTTGAGTTTAGAGGAGCGATCTCGTA
CTGGAGGTAGAGTTCGGGGTCGCTTTTCTTTTAAGTTCGAGGAATGGTGGACTCGGCATGAAGATTGCAGGAGGATTATATCTCAATCGGGAAGTTGGGATGCCAATAGT
CATGCTTCTTTCCCATTACAACATGATCTGAATGCTTGCACCACAACTCTGGGGGTCGGGGGTTCAAGCAAAATCAGCGCTTGA
Protein sequenceShow/hide protein sequence
MVDDCNLQDLGYTGGVFTWCNRRGSEDQVSLRLDRFLANSSFCNMFQDYQVTNMDWAKSDHMPIELSLEERSRTGGRVRGRFSFKFEEWWTRHEDCRRIISQSGSWDANS
HASFPLQHDLNACTTTLGVGGSSKISA