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Lag0000802 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000802
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPeptidylprolyl isomerase
Genome locationchr4:16986588..16990283
RNA-Seq ExpressionLag0000802
SyntenyLag0000802
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040000.1 protein transport Sec1a-like isoform X1 [Cucumis melo var. makuwa]7.9e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
XP_011656697.1 peptidyl-prolyl cis-trans isomerase FKBP43 [Cucumis sativus]7.9e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
XP_016902485.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP43-like [Cucumis melo]7.9e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
XP_038877329.1 peptidyl-prolyl cis-trans isomerase FKBP43-like isoform X1 [Benincasa hispida]6.0e-0674.29Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNNFS
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN +
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNNFS
XP_038877330.1 peptidyl-prolyl cis-trans isomerase FKBP43-like isoform X2 [Benincasa hispida]6.0e-0674.29Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNNFS
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN +
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNNFS
TrEMBL top hitse value%identityAlignment
A0A0A0K8Z9 Peptidylprolyl isomerase3.8e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
A0A1S4E3C7 peptidyl-prolyl cis-trans isomerase FKBP43-like3.8e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
A0A5A7T9N3 Peptidylprolyl isomerase3.8e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
A0A5D3DLI0 Peptidylprolyl isomerase3.8e-0678.79Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL SCRHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
A0A6J1L179 Peptidylprolyl isomerase5.5e-0575.76Show/hide
Query:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
        +EY EADE+IFS+IGPR I LSGYFL S RHNN
Subjt:  MEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12340.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein2.7e-0439.58Show/hide
Query:  GRRNSLSIC-------EDGKATMEYGEADEIIFSIIGPRCIQLSGYFL
        G ++ L +C       +  +  +E+ E DE+IFS+IGPR + L+GYFL
Subjt:  GRRNSLSIC-------EDGKATMEYGEADEIIFSIIGPRCIQLSGYFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCTCTCCCAGTCTCCTCTCATGCTCGTGTTTACCGCCACCGCCGGTGCTTTTCGTGCTTGCTTCCGAGTTTAGGTCTCCGTCGGCACGATTATATTCGGATTAA
AGTCCTTGAGTTAAATGGGTTTGCGCTATTAAAGCCCTTGAGTTTCAAAAAGTCTGTTTCCGTTGTTGCTGGTAGACGAAACTCCCTCTCCATATGCGAAGATGGCAAGG
CAACAATGGAATATGGAGAGGCTGATGAAATCATTTTCTCTATTATTGGTCCTCGATGCATTCAACTTTCTGGTTATTTTCTAAGAAGTTGTCGACACAATAATTTCTCC
CTTATGTGTGTGTTTCACTCGAGGGTTGGACCCCTTGTTCTCAAGTTTAAGCTTCAATTGATCCCTGGAGTCTTGAAGTCTTCGAGTCTTGAAGGGTTTTGTGGTCTTCA
AGGGCGGTTCAACACTCGGGAACTTATGGATTTCAAGGAGTCGTCTACCTTCTCTTTTGGTGGAGTCTCTTTGGATTCTCTTGCCTTGTTGAGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCTCTCCCAGTCTCCTCTCATGCTCGTGTTTACCGCCACCGCCGGTGCTTTTCGTGCTTGCTTCCGAGTTTAGGTCTCCGTCGGCACGATTATATTCGGATTAA
AGTCCTTGAGTTAAATGGGTTTGCGCTATTAAAGCCCTTGAGTTTCAAAAAGTCTGTTTCCGTTGTTGCTGGTAGACGAAACTCCCTCTCCATATGCGAAGATGGCAAGG
CAACAATGGAATATGGAGAGGCTGATGAAATCATTTTCTCTATTATTGGTCCTCGATGCATTCAACTTTCTGGTTATTTTCTAAGAAGTTGTCGACACAATAATTTCTCC
CTTATGTGTGTGTTTCACTCGAGGGTTGGACCCCTTGTTCTCAAGTTTAAGCTTCAATTGATCCCTGGAGTCTTGAAGTCTTCGAGTCTTGAAGGGTTTTGTGGTCTTCA
AGGGCGGTTCAACACTCGGGAACTTATGGATTTCAAGGAGTCGTCTACCTTCTCTTTTGGTGGAGTCTCTTTGGATTCTCTTGCCTTGTTGAGAATCTAA
Protein sequenceShow/hide protein sequence
MSPLPVSSHARVYRHRRCFSCLLPSLGLRRHDYIRIKVLELNGFALLKPLSFKKSVSVVAGRRNSLSICEDGKATMEYGEADEIIFSIIGPRCIQLSGYFLRSCRHNNFS
LMCVFHSRVGPLVLKFKLQLIPGVLKSSSLEGFCGLQGRFNTRELMDFKESSTFSFGGVSLDSLALLRI