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Lag0000816 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000816
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:17302409..17306896
RNA-Seq ExpressionLag0000816
SyntenyLag0000816
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4354580.1 hypothetical protein G4B88_029192 [Cannabis sativa]2.6e-0847.62Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI
        + R RK+E+ V+ G  P EW ++V+RYF + RL+ +E LEAAI+CL+  AL W  WE   H I
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI

KAF4369344.1 hypothetical protein F8388_019569 [Cannabis sativa]2.6e-0847.62Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI
        + R RK+E+ V+ G  P EW ++V+RYF + RL+ +E LEAAI+CL+  AL W  WE   H I
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI

XP_022848844.1 uncharacterized protein LOC111371171 [Olea europaea var. sylvestris]1.7e-1045.83Show/hide
Query:  KSKGKKIDESNNVTLEVREGSNEDSQSHLSKSLALIFDLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEK
        K KG   ++S  +T E+R GSN  ++   S       + R+R+LE+LVF G  P +W+ +VERYF VNRL + E +EAA LC D  AL W+ WEEK
Subjt:  KSKGKKIDESNNVTLEVREGSNEDSQSHLSKSLALIFDLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEK

XP_022878938.1 uncharacterized protein LOC111396702 [Olea europaea var. sylvestris]1.5e-0852.54Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEK
        +++ R+LE+ VF G +P EW+ + ERYFTVN L E ENLE A LC ++ AL W+ WE+K
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEK

XP_038904464.1 uncharacterized protein LOC120090832 [Benincasa hispida]3.6e-1360Show/hide
Query:  LIFDLRLRKLEILVFG---GVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEK
        L+FD+RLRKLEI +F    G  P+ W H+VERYF VNRL+E + +EAAILCL+  AL+WH WEE+
Subjt:  LIFDLRLRKLEILVFG---GVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEK

TrEMBL top hitse value%identityAlignment
A0A5D3BD43 Aminoacyl-tRNA ligase1.4e-0742.68Show/hide
Query:  LRLRKLEILVFGG---VSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSIVADLVALERPWSRRRDY
        +RLRKLE+ +F G    S   WLH+VERYF VNRL E + L+ A+LC +  AL W  W+    SI++     +  W R R +
Subjt:  LRLRKLEILVFGG---VSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSIVADLVALERPWSRRRDY

A0A7J6E0Z8 Uncharacterized protein1.7e-0846.03Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI
        + R RK+E+ V+ G  P EW ++ +RYF + RL+ +E LEAAI+CL+  AL W  WE   H+I
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI

A0A7J6E9S0 Retrotrans_gag domain-containing protein1.3e-0847.62Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI
        + R RK+E+ V+ G  P EW ++V+RYF + RL+ +E LEAAI+CL+  AL W  WE   H I
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI

A0A7J6FF68 Retrotrans_gag domain-containing protein1.3e-0847.62Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI
        + R RK+E+ V+ G  P EW ++V+RYF + RL+ +E LEAAI+CL+  AL W  WE   H I
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSI

A0A7J6HRA8 Retrotrans_gag domain-containing protein1.1e-0739.24Show/hide
Query:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSIVADLVALERPWSRRRD
        + R R +E+ +F G  P +W ++VERYF + RL   E LEAA+LCL+  AL+W  WE +   I        R W+  +D
Subjt:  DLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSIVADLVALERPWSRRRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein3.4e-0629.79Show/hide
Query:  EKSKGKKIDESNNVTLEVREGSNEDSQSHLSKSLALIFDLR---LRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKW
        E  +GK++++  +     R   +       +    ++ D R   +R++E+ VF G    EW  +VER+F V R  +S+ L+   L L+ VALKW
Subjt:  EKSKGKKIDESNNVTLEVREGSNEDSQSHLSKSLALIFDLR---LRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAGTATCGAGTTTTATCAATTTGGTATCAGAGCGCCGAGGCCGAGGCCGACCACTCGACCCACTTCTGTGGGCCGAGTCCTCCCTCTTCCGTTCGGTCCCTAC
TACCCCTGGCCGCCTCGGTTCCACTCGGTTCAGCCAAATCGCCTCCAAACGCTTGAAAACCTTAGAGCATAAGCAGCTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAA
GCACCACACCGGTGTGTAGGTTTACTGTCTTGCAGGCCACGTCTTCCCTCTCTCATACAAATATATCGTTGGTGGCACGTGAAGAAAACACGGCTCCAACCGAAAAATCG
AAAGGGAAGAAAATCGATGAATCCAACAATGTGACTCTAGAAGTAAGAGAAGGAAGTAATGAAGATTCACAATCGCACTTGAGTAAATCTTTGGCTCTTATCTTCGATCT
GCGATTACGGAAACTGGAAATTCTAGTATTTGGAGGAGTGAGTCCCTTGGAATGGCTTCATCAAGTAGAAAGATACTTCACCGTTAATCGTTTGGCTGAATCCGAGAACT
TAGAAGCCGCCATATTGTGTCTCGACGATGTAGCCCTTAAATGGCATCATTGGGAGGAAAAATGCCATTCGATCGTCGCCGATCTTGTTGCACTGGAAAGGCCATGGAGC
CGCCGCCGAGATTATCGAAAACTCGCGTTGTTGATGCAGGTACAACGTCTTTCGACATTAGTACAAGGACATATGACATCTTTGGACTTTTGTTGCTACGACGCTTTTCA
GCATGAGTACAAGGACATCATAAGTACAAGGACATGGACATGTTCCTTGGACTTTTGCTGCTGCCACGTCTTTCACCATGAGTACAAGGACATGTTCCTTGACTTTAGGA
CATGTTCCTTAGACTTTTGCCGCTACCACGTCTTTCAGCATGAGTACAGGGAATGGACATGTTCCTTGGGCTTTTGCCGCTGCCACGTCTTTCAGCATAAGTACAAGGAC
ATGGACATGTTCTCTGGACTTTTGCCGCCGGCACGTCTTTCAGCACGAGTACAAGGAATGGACATGTTCCTTGGACTTTTGCCGCCACCACATCTTTCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGAGTATCGAGTTTTATCAATTTGGTATCAGAGCGCCGAGGCCGAGGCCGACCACTCGACCCACTTCTGTGGGCCGAGTCCTCCCTCTTCCGTTCGGTCCCTAC
TACCCCTGGCCGCCTCGGTTCCACTCGGTTCAGCCAAATCGCCTCCAAACGCTTGAAAACCTTAGAGCATAAGCAGCTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAA
GCACCACACCGGTGTGTAGGTTTACTGTCTTGCAGGCCACGTCTTCCCTCTCTCATACAAATATATCGTTGGTGGCACGTGAAGAAAACACGGCTCCAACCGAAAAATCG
AAAGGGAAGAAAATCGATGAATCCAACAATGTGACTCTAGAAGTAAGAGAAGGAAGTAATGAAGATTCACAATCGCACTTGAGTAAATCTTTGGCTCTTATCTTCGATCT
GCGATTACGGAAACTGGAAATTCTAGTATTTGGAGGAGTGAGTCCCTTGGAATGGCTTCATCAAGTAGAAAGATACTTCACCGTTAATCGTTTGGCTGAATCCGAGAACT
TAGAAGCCGCCATATTGTGTCTCGACGATGTAGCCCTTAAATGGCATCATTGGGAGGAAAAATGCCATTCGATCGTCGCCGATCTTGTTGCACTGGAAAGGCCATGGAGC
CGCCGCCGAGATTATCGAAAACTCGCGTTGTTGATGCAGGTACAACGTCTTTCGACATTAGTACAAGGACATATGACATCTTTGGACTTTTGTTGCTACGACGCTTTTCA
GCATGAGTACAAGGACATCATAAGTACAAGGACATGGACATGTTCCTTGGACTTTTGCTGCTGCCACGTCTTTCACCATGAGTACAAGGACATGTTCCTTGACTTTAGGA
CATGTTCCTTAGACTTTTGCCGCTACCACGTCTTTCAGCATGAGTACAGGGAATGGACATGTTCCTTGGGCTTTTGCCGCTGCCACGTCTTTCAGCATAAGTACAAGGAC
ATGGACATGTTCTCTGGACTTTTGCCGCCGGCACGTCTTTCAGCACGAGTACAAGGAATGGACATGTTCCTTGGACTTTTGCCGCCACCACATCTTTCAGCATAA
Protein sequenceShow/hide protein sequence
MKRVSSFINLVSERRGRGRPLDPLLWAESSLFRSVPTTPGRLGSTRFSQIASKRLKTLEHKQLSDLSIGGGVASTTPVCRFTVLQATSSLSHTNISLVAREENTAPTEKS
KGKKIDESNNVTLEVREGSNEDSQSHLSKSLALIFDLRLRKLEILVFGGVSPLEWLHQVERYFTVNRLAESENLEAAILCLDDVALKWHHWEEKCHSIVADLVALERPWS
RRRDYRKLALLMQVQRLSTLVQGHMTSLDFCCYDAFQHEYKDIISTRTWTCSLDFCCCHVFHHEYKDMFLDFRTCSLDFCRYHVFQHEYREWTCSLGFCRCHVFQHKYKD
MDMFSGLLPPARLSARVQGMDMFLGLLPPPHLSA