; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000821 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000821
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr4:17475129..17475755
RNA-Seq ExpressionLag0000821
SyntenyLag0000821
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]6.9e-4652.6Show/hide
Query:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN
        S ++  FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL+G+ PCP   +     +  T    G         D++I +S ++ T   VN
Subjt:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN

Query:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
          +E W+  D LLLGWLYNSMT +VA Q+MG+ N +DLW A Q+ FGVQSRAEED+LRQ+ Q T KG+ KM ++L V K++ DNLGQ GS V
Subjt:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]1.9e-4852.82Show/hide
Query:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS
        S+ ++   +F++P LNQ+LNQ+TTIKLDR N+LLWK LALPIL+SYKL  HL G+ PC P +I  T +  ++   + G  S+         +S ++T V 
Subjt:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS

Query:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
         VNP+YE W+  D LLLGWLYNSMT EV  Q+MG+ NAKDLW A Q+LFG+QSRA+ED+L Q FQ T KG++ M ++LR  K++ +NLGQA SLV
Subjt:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]6.9e-4652.6Show/hide
Query:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN
        S ++  FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL+G+ PCP   +     +  T    G         D++I +S ++ T   VN
Subjt:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN

Query:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
          +E W+  D LLLGWLYNSMT +VA Q+MG+ N +DLW A Q+ FGVQSRAEED+LRQ+ Q T KG+ KM ++L V K++ DNLGQ GS V
Subjt:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]4.9e-5256.85Show/hide
Query:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS
        ++VS A   F+SPPLNQLLNQIT+IK+DR NFLLW+NLALPILRSYKL  +L+G  PCPP  +  T                   T ++I  S ++ +  
Subjt:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS

Query:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLVSV
         +NP YE+W+VVD+LLLGWLYNSM  +VA QVMG+  +++LW A+QELFGVQSRAE DYL+QVFQ+TCKGS++M ++L++ KSHADNL  AGS VSV
Subjt:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLVSV

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]3.3e-4859.89Show/hide
Query:  TTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDT---------GNTHGGSSSEVVHTDSSIASSFTATTVSAVNPQYESWMVVD
        TTIKLD+ N+LLW+NLALPILRSY+LEGHL+G+ PCPP     T ++  T         G  + G +S  +     I ++  ++ V  VNP YES  VVD
Subjt:  TTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDT---------GNTHGGSSSEVVHTDSSIASSFTATTVSAVNPQYESWMVVD

Query:  QLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
        QLLLGWLYN MT EVA QVMGYEN K LWAAIQELFG+QSRA EDYLRQVFQ+TCKG++KM ++LRV K+H+DNLG  GS V
Subjt:  QLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911163.2e-4152.91Show/hide
Query:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS
        S+ ++   +F++P LNQ+LNQ+TTIKLDR N+LLWK LALPIL+SYKL  HL G+ PC P +I  T +  ++   + G  S+         +S ++T V 
Subjt:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS

Query:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSI
         VNP+YE W+  D LLLGWLYNSMT EV  Q+MG+ NAKDLW A Q+LFG+QSRA+ED+L Q FQ T KG +
Subjt:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSI

A0A5A7SIT7 Uncharacterized protein3.3e-4652.6Show/hide
Query:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN
        S ++  FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL+G+ PCP   +     +  T    G         D++I +S ++ T   VN
Subjt:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN

Query:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
          +E W+  D LLLGWLYNSMT +VA Q+MG+ N +DLW A Q+ FGVQSRAEED+LRQ+ Q T KG+ KM ++L V K++ DNLGQ GS V
Subjt:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

A0A5A7VPY0 Uncharacterized protein9.4e-4952.82Show/hide
Query:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS
        S+ ++   +F++P LNQ+LNQ+TTIKLDR N+LLWK LALPIL+SYKL  HL G+ PC P +I  T +  ++   + G  S+         +S ++T V 
Subjt:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS

Query:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
         VNP+YE W+  D LLLGWLYNSMT EV  Q+MG+ NAKDLW A Q+LFG+QSRA+ED+L Q FQ T KG++ M ++LR  K++ +NLGQA SLV
Subjt:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

A0A5D3BCH9 Uncharacterized protein3.3e-4652.6Show/hide
Query:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN
        S ++  FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL+G+ PCP   +     +  T    G         D++I +S ++ T   VN
Subjt:  SSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSAVN

Query:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV
          +E W+  D LLLGWLYNSMT +VA Q+MG+ N +DLW A Q+ FGVQSRAEED+LRQ+ Q T KG+ KM ++L V K++ DNLGQ GS V
Subjt:  PQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLV

A0A6J1DCW4 uncharacterized protein LOC1110195982.4e-5256.85Show/hide
Query:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS
        ++VS A   F+SPPLNQLLNQIT+IK+DR NFLLW+NLALPILRSYKL  +L+G  PCPP  +  T                   T ++I  S ++ +  
Subjt:  SIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVS

Query:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLVSV
         +NP YE+W+VVD+LLLGWLYNSM  +VA QVMG+  +++LW A+QELFGVQSRAE DYL+QVFQ+TCKGS++M ++L++ KSHADNL  AGS VSV
Subjt:  AVNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLVSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGTCACTTCATCAAACAGTTCAATAGTGTCCTCTGCAAACCCTACATTCAGCAGTCCCCCTCTCAACCAGCTCTTAAACCAAATTACTACAATCAAATTAGA
TCGTGTGAATTTTCTCTTATGGAAGAATCTTGCTCTCCCTATATTAAGAAGCTATAAACTGGAGGGACATCTCTCTGGAAAATGTCCTTGTCCACCGGCACTCATTCACC
AAACGGTGGAAAATATCGACACTGGAAATACGCATGGAGGATCAAGTTCTGAAGTTGTCCACACTGATTCAAGCATTGCGTCAAGTTTTACGGCTACTACAGTATCTGCA
GTTAACCCTCAATATGAGTCATGGATGGTTGTGGATCAACTCTTACTAGGATGGCTCTATAATTCAATGACACTGGAAGTGGCCACTCAGGTAATGGGTTACGAAAATGC
CAAAGATCTTTGGGCAGCAATTCAAGAGCTATTTGGAGTGCAGTCAAGAGCTGAGGAGGATTATCTTAGACAGGTATTCCAAAAAACCTGTAAAGGTTCTATTAAGATGT
CTGATTTTTTGCGAGTGACGAAGTCTCATGCAGATAACTTGGGTCAAGCTGGTAGTTTGGTCTCCGTTAGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGTCACTTCATCAAACAGTTCAATAGTGTCCTCTGCAAACCCTACATTCAGCAGTCCCCCTCTCAACCAGCTCTTAAACCAAATTACTACAATCAAATTAGA
TCGTGTGAATTTTCTCTTATGGAAGAATCTTGCTCTCCCTATATTAAGAAGCTATAAACTGGAGGGACATCTCTCTGGAAAATGTCCTTGTCCACCGGCACTCATTCACC
AAACGGTGGAAAATATCGACACTGGAAATACGCATGGAGGATCAAGTTCTGAAGTTGTCCACACTGATTCAAGCATTGCGTCAAGTTTTACGGCTACTACAGTATCTGCA
GTTAACCCTCAATATGAGTCATGGATGGTTGTGGATCAACTCTTACTAGGATGGCTCTATAATTCAATGACACTGGAAGTGGCCACTCAGGTAATGGGTTACGAAAATGC
CAAAGATCTTTGGGCAGCAATTCAAGAGCTATTTGGAGTGCAGTCAAGAGCTGAGGAGGATTATCTTAGACAGGTATTCCAAAAAACCTGTAAAGGTTCTATTAAGATGT
CTGATTTTTTGCGAGTGACGAAGTCTCATGCAGATAACTTGGGTCAAGCTGGTAGTTTGGTCTCCGTTAGTCCTTAA
Protein sequenceShow/hide protein sequence
MANVTSSNSSIVSSANPTFSSPPLNQLLNQITTIKLDRVNFLLWKNLALPILRSYKLEGHLSGKCPCPPALIHQTVENIDTGNTHGGSSSEVVHTDSSIASSFTATTVSA
VNPQYESWMVVDQLLLGWLYNSMTLEVATQVMGYENAKDLWAAIQELFGVQSRAEEDYLRQVFQKTCKGSIKMSDFLRVTKSHADNLGQAGSLVSVSP