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Lag0000833 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000833
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpartner of Y14 and mago-like
Genome locationchr4:17796050..17798857
RNA-Seq ExpressionLag0000833
SyntenyLag0000833
Gene Ontology termsGO:1903259 - exon-exon junction complex disassembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588519.1 Partner of Y14 and mago, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1185.71Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
        +IRIAEAQLQKTP  DMKPEQLNKLSKLE+W SELTLLEEQRLK NTS+
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
XP_022159168.1 partner of Y14 and mago isoform X1 [Momordica charantia]1.1e-1289.58Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
        +IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSELTLLEEQRL+ NTS
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
XP_022159171.1 partner of Y14 and mago isoform X2 [Momordica charantia]1.1e-1289.58Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
        +IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSELTLLEEQRL+ NTS
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
XP_023529475.1 partner of Y14 and mago-like [Cucurbita pepo subsp. pepo]2.7e-1183.67Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
        +IRIAEAQLQKTP  DMKPEQLNKLSKLE+W +ELTLLEEQRLK NTS+
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
XP_038887839.1 partner of Y14 and mago [Benincasa hispida]2.5e-1287.76Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
        +IRIAEAQLQKTPLHDMKPEQ NKLSKLE WRSELTLLEE+RLK N+SS
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
TrEMBL top hitse value%identityAlignment
A0A1S3C0A7 partner of Y14 and mago isoform X13.9e-1183.67Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
        +IR+AEAQLQKTPL DMKPEQ NKLSKLE WRSEL LLEEQRLK N+SS
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
A0A6J1DY25 partner of Y14 and mago isoform X15.4e-1389.58Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
        +IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSELTLLEEQRL+ NTS
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
A0A6J1E341 partner of Y14 and mago isoform X25.4e-1389.58Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
        +IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSELTLLEEQRL+ NTS
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTS
A0A6J1EZE1 partner of Y14 and mago-like3.0e-1183.67Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
        +IRIAEAQLQKTP  DMKPEQLNKLSKLE+W SELTLLEEQR K NTS+
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
A0A6J1IA06 partner of Y14 and mago-like2.3e-1183.67Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
        +IRIAEAQLQKTPL DMKPEQ+NKLSKLE+WRSEL LLEEQRLK N+ S
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS
SwissProt top hitse value%identityAlignment
Q9LPZ4 Partner of Y14 and mago3.1e-0558.54Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
        +IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
Arabidopsis top hitse value%identityAlignment
AT1G11400.1 partner of Y14-MAGO2.2e-0658.54Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
        +IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
AT1G11400.2 partner of Y14-MAGO2.2e-0658.54Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
        +IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
AT1G11400.3 partner of Y14-MAGO2.2e-0658.54Show/hide
Query:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ
        +IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  QIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACTCCACATGCCTCTTGCAGACTTCCTTGGCTAAACCTATATGGAAAGACAAATATCCTAAGATTAAATTTCTCCTTTGGGAAAATCTCAAAGGGGCATCAAC
ACCAAGGATCTCCTTCCAAGACGCATGCCTTATGTGGTCATCTGTCCCAGTTGCTGCACTTTATGTAAAGTGGGTGTTGAATCTTAAAACCAGATTTCATACACTGCCCT
TTGCTTGGAAATTTTGGAGCAGAGTGCTTAAAGCCTTTGGTTGCTTTACGGTTCTACCTAGGAATGCATTTGTTCATCCTCATCTAAGCTTCCCTCTTCCCCATCTTGAT
CTTCTCCTTGTAGAACCAGGTTTTGCAACTTCTTATTCTTACAGCAACTTCCAGATTCGAATTGCAGAAGCTCAGTTGCAGAAAACACCACTGCATGATATGAAGCCAGA
GCAGTTGAACAAGTTATCAAAACTGGAAGATTGGCGCTCTGAACTAACACTTCTTGAAGAACAAAGGCTAAAACAGAATACGTCGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGACTCCACATGCCTCTTGCAGACTTCCTTGGCTAAACCTATATGGAAAGACAAATATCCTAAGATTAAATTTCTCCTTTGGGAAAATCTCAAAGGGGCATCAAC
ACCAAGGATCTCCTTCCAAGACGCATGCCTTATGTGGTCATCTGTCCCAGTTGCTGCACTTTATGTAAAGTGGGTGTTGAATCTTAAAACCAGATTTCATACACTGCCCT
TTGCTTGGAAATTTTGGAGCAGAGTGCTTAAAGCCTTTGGTTGCTTTACGGTTCTACCTAGGAATGCATTTGTTCATCCTCATCTAAGCTTCCCTCTTCCCCATCTTGAT
CTTCTCCTTGTAGAACCAGGTTTTGCAACTTCTTATTCTTACAGCAACTTCCAGATTCGAATTGCAGAAGCTCAGTTGCAGAAAACACCACTGCATGATATGAAGCCAGA
GCAGTTGAACAAGTTATCAAAACTGGAAGATTGGCGCTCTGAACTAACACTTCTTGAAGAACAAAGGCTAAAACAGAATACGTCGTCATGA
Protein sequenceShow/hide protein sequence
MGDSTCLLQTSLAKPIWKDKYPKIKFLLWENLKGASTPRISFQDACLMWSSVPVAALYVKWVLNLKTRFHTLPFAWKFWSRVLKAFGCFTVLPRNAFVHPHLSFPLPHLD
LLLVEPGFATSYSYSNFQIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELTLLEEQRLKQNTSS