; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000870 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000870
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:18581414..18583294
RNA-Seq ExpressionLag0000870
SyntenyLag0000870
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-3145.7Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +T+ W+ +  T++E   V +   + + L  ++++LC+V K+ + KR++ EA ++VMKSVWRVH+ TRF+  G NI+VI FKS  EK+R+L+SGPW F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG
        +KSLLVL SP A +QPL M F   AFW+QI  +PF+ +++ +A  LG   G
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]3.4e-3145.7Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +TE W+ ++LT E+   + + S++ ++ P E++Q   VGK+ + KR++ EAF++VMKS+W+VH  T  + AG N++VI FKS  EKNR+L SGPW+F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG
        + SLLVL SP A DQP  M F   A W+QI  +PFQ +   +A+ LG   G
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]7.8e-2837.86Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +T+ W+ ++L  EE   + + + + + L  +++QLC VGK+   KR+  EAF +VMK VW++H+ TR + AG NI+VI FK+  EK R+ + GPW F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMR------------APLGRMLPVSP
        DKSLL+L    A ++PL +  +  AFWVQI  + F+ +T  +A+ LG   G          +V EV    +Y DW+R             PL R L V  
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMR------------APLGRMLPVSP

Query:  RDQGKD
         D GKD
Subjt:  RDQGKD

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.6e-3348.03Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +TE W+ ++LT+EE     V + + + L  E++QLC VGK+ + KR++ +A  +VMK VW++H  TR +AAG NI+VI FK+ +EK R+L+SGPW F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGR
        DKSL VL SP A D+PL + F   AFWVQI  +PF++LT  +A+ LG+  G+
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGR

XP_024039368.1 uncharacterized protein LOC112098007 [Citrus clementina]9.2e-2134.22Show/hide
Query:  VLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNFDK
        +LT + +  +L +EE   V V   R  +  E+    CL+GKVL  K +N E  KA M+  WR   + + ++ G+NIF+ +F +  EK R+L  GPW+FD+
Subjt:  VLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNFDK

Query:  SLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFP-----------GECDMLPQVAEVGIEEAYGDWMRA
        +LLVL  P       S  FT  +FWVQI  +P   +     Q+LG   G+              EC  L    +   E  YG WM A
Subjt:  SLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFP-----------GECDMLPQVAEVGIEEAYGDWMRA

TrEMBL top hitse value%identityAlignment
A0A314Z5A5 DUF4283 domain-containing protein1.0e-2036.06Show/hide
Query:  EVLTERWKTWSLTDEETAAVAV-HSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        EV+T   K   LT+EET  V +  +D   +   E L+  LVGKVL+ +  N EAFK  M  +W    + R    G+N+F+  F + L++NR+L +GPWNF
Subjt:  EVLTERWKTWSLTDEETAAVAV-HSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMRA--------PLGR----MLPVSP
        DK+L++L  P     P  M      FWVQI  VP   +T    +++GN      GEC  + Q  E    E  G ++R         PL R     LP   
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMRA--------PLGR----MLPVSP

Query:  RDQ-GKDK
         DQ  KDK
Subjt:  RDQ-GKDK

A0A6J1D765 uncharacterized protein LOC1110179025.6e-3245.7Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +T+ W+ +  T++E   V +   + + L  ++++LC+V K+ + KR++ EA ++VMKSVWRVH+ TRF+  G NI+VI FKS  EK+R+L+SGPW F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG
        +KSLLVL SP A +QPL M F   AFW+QI  +PF+ +++ +A  LG   G
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG

A0A6J1DP89 uncharacterized protein LOC1110229321.6e-3145.7Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +TE W+ ++LT E+   + + S++ ++ P E++Q   VGK+ + KR++ EAF++VMKS+W+VH  T  + AG N++VI FKS  EKNR+L SGPW+F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG
        + SLLVL SP A DQP  M F   A W+QI  +PFQ +   +A+ LG   G
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFG

A0A6J1DVS4 uncharacterized protein LOC1110235553.8e-2837.86Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +T+ W+ ++L  EE   + + + + + L  +++QLC VGK+   KR+  EAF +VMK VW++H+ TR + AG NI+VI FK+  EK R+ + GPW F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMR------------APLGRMLPVSP
        DKSLL+L    A ++PL +  +  AFWVQI  + F+ +T  +A+ LG   G          +V EV    +Y DW+R             PL R L V  
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMR------------APLGRMLPVSP

Query:  RDQGKD
         D GKD
Subjt:  RDQGKD

A0A6J1DYG3 uncharacterized protein LOC1110246767.9e-3448.03Show/hide
Query:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF
        M+ +TE W+ ++LT+EE     V + + + L  E++QLC VGK+ + KR++ +A  +VMK VW++H  TR +AAG NI+VI FK+ +EK R+L+SGPW F
Subjt:  MEVLTERWKTWSLTDEETAAVAVHSDRAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNF

Query:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGR
        DKSL VL SP A D+PL + F   AFWVQI  +PF++LT  +A+ LG+  G+
Subjt:  DKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQFLTSVVAQRLGNSFGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein6.9e-0629.06Show/hide
Query:  LVGKVLSCKRVNPEAFKAVMKSVW----RVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNFDKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPF
        L G+ +  +R N  +  A M  +W     VH   R        F+   +  LE   +L  GPW F+  +++L     + +P    F    FWVQI  +PF
Subjt:  LVGKVLSCKRVNPEAFKAVMKSVW----RVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNFDKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPF

Query:  QFLTSVVAQRLGNSFGR
        QFL   V + +G + G+
Subjt:  QFLTSVVAQRLGNSFGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGCGACGGCGGCGTGACTGGAGGAGACCGGCAGCGGTGCGAGACGCAGACGACGGCGTGACTGGAGGAGACCGGCGGCGGTGCGAGACGAGGACGGCGCGCGA
GGGTGTGATCGGCGAAGAAGAAGCAACCGAAAATGGGACTGGCGGGGGGAGGGAAGGAGAGAGGAGAAAGAGAGGAGCGAAAGGTTTTCCTTTTGGGTTTGGTTACCGTG
GTGGCTGGTGTGTGGTGGTTGTGTCTTCAAGGATGGAGGTGTTGACTGAGCGTTGGAAAACTTGGTCTCTTACTGACGAAGAGACAGCAGCGGTGGCAGTACATTCGGAT
CGTGCGGTATTATTGCCTGAGGAACACTTACAACTGTGCCTGGTTGGTAAGGTTCTGTCCTGTAAGAGGGTGAACCCAGAGGCTTTCAAGGCTGTCATGAAATCTGTATG
GAGGGTTCATTCTGATACCCGTTTTGATGCGGCGGGTGATAACATTTTTGTGATTCGATTTAAGTCTCGTCTGGAGAAGAATAGAATCCTGAATTCGGGTCCATGGAATT
TCGATAAGTCTCTATTAGTGCTTTGTTCCCCAGGGGCTAAGGACCAACCGCTTTCGATGCGTTTTACGGAGGAGGCCTTCTGGGTGCAAATCTCGCAGGTCCCGTTCCAG
TTCTTAACGTCGGTCGTGGCTCAGCGGCTGGGGAATTCGTTTGGTCGTTTTCCTGGGGAATGTGATATGCTTCCTCAGGTGGCGGAGGTAGGAATAGAGGAGGCGTACGG
TGATTGGATGAGGGCCCCTTTAGGGCGTATGCTACCCGTTTCGCCGCGGGATCAGGGTAAGGATAAGGATGCGGTAGTGGCTTCGGAGGCCGGGGGTGAAATCAGTGATC
GAAATCTTGCGGTGGAGGATCGGACTCCAGCTTCGCCTCCGGTGGTGGTGGTTGGCCCGCTTTCTCCGGATAGTGGGAAGGTGAACGAGCAGGCAAACGTGGGGGAGACT
CCTATTTTTATGGATTGCACGACCGAGTCATTGGAAGTGGGTGGTCTTCCGGATCAGGCGGCACGGGCTGCCTTGCCTGCTGTGGGCCTCGTGGGCCTGAAGAATGATGG
CAAAGGTAAGGCGGCCGTGTTTGAGGGTGTTGTTGCTGACAATTGGGTCGTTCTGAGTGGGTCGCTCTCTGAGGAGGGGGGGCTAAGTTTGTTAGCCCTAAAGCCATGGG
GTGAAGGGGCTGGGCCTGAAGGAATAAAAATCCTACGCAGCGGAAGCGTATATCAGATCGTTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGCGACGGCGGCGTGACTGGAGGAGACCGGCAGCGGTGCGAGACGCAGACGACGGCGTGACTGGAGGAGACCGGCGGCGGTGCGAGACGAGGACGGCGCGCGA
GGGTGTGATCGGCGAAGAAGAAGCAACCGAAAATGGGACTGGCGGGGGGAGGGAAGGAGAGAGGAGAAAGAGAGGAGCGAAAGGTTTTCCTTTTGGGTTTGGTTACCGTG
GTGGCTGGTGTGTGGTGGTTGTGTCTTCAAGGATGGAGGTGTTGACTGAGCGTTGGAAAACTTGGTCTCTTACTGACGAAGAGACAGCAGCGGTGGCAGTACATTCGGAT
CGTGCGGTATTATTGCCTGAGGAACACTTACAACTGTGCCTGGTTGGTAAGGTTCTGTCCTGTAAGAGGGTGAACCCAGAGGCTTTCAAGGCTGTCATGAAATCTGTATG
GAGGGTTCATTCTGATACCCGTTTTGATGCGGCGGGTGATAACATTTTTGTGATTCGATTTAAGTCTCGTCTGGAGAAGAATAGAATCCTGAATTCGGGTCCATGGAATT
TCGATAAGTCTCTATTAGTGCTTTGTTCCCCAGGGGCTAAGGACCAACCGCTTTCGATGCGTTTTACGGAGGAGGCCTTCTGGGTGCAAATCTCGCAGGTCCCGTTCCAG
TTCTTAACGTCGGTCGTGGCTCAGCGGCTGGGGAATTCGTTTGGTCGTTTTCCTGGGGAATGTGATATGCTTCCTCAGGTGGCGGAGGTAGGAATAGAGGAGGCGTACGG
TGATTGGATGAGGGCCCCTTTAGGGCGTATGCTACCCGTTTCGCCGCGGGATCAGGGTAAGGATAAGGATGCGGTAGTGGCTTCGGAGGCCGGGGGTGAAATCAGTGATC
GAAATCTTGCGGTGGAGGATCGGACTCCAGCTTCGCCTCCGGTGGTGGTGGTTGGCCCGCTTTCTCCGGATAGTGGGAAGGTGAACGAGCAGGCAAACGTGGGGGAGACT
CCTATTTTTATGGATTGCACGACCGAGTCATTGGAAGTGGGTGGTCTTCCGGATCAGGCGGCACGGGCTGCCTTGCCTGCTGTGGGCCTCGTGGGCCTGAAGAATGATGG
CAAAGGTAAGGCGGCCGTGTTTGAGGGTGTTGTTGCTGACAATTGGGTCGTTCTGAGTGGGTCGCTCTCTGAGGAGGGGGGGCTAAGTTTGTTAGCCCTAAAGCCATGGG
GTGAAGGGGCTGGGCCTGAAGGAATAAAAATCCTACGCAGCGGAAGCGTATATCAGATCGTTGATTCTTAA
Protein sequenceShow/hide protein sequence
MGGRRRRDWRRPAAVRDADDGVTGGDRRRCETRTAREGVIGEEEATENGTGGGREGERRKRGAKGFPFGFGYRGGWCVVVVSSRMEVLTERWKTWSLTDEETAAVAVHSD
RAVLLPEEHLQLCLVGKVLSCKRVNPEAFKAVMKSVWRVHSDTRFDAAGDNIFVIRFKSRLEKNRILNSGPWNFDKSLLVLCSPGAKDQPLSMRFTEEAFWVQISQVPFQ
FLTSVVAQRLGNSFGRFPGECDMLPQVAEVGIEEAYGDWMRAPLGRMLPVSPRDQGKDKDAVVASEAGGEISDRNLAVEDRTPASPPVVVVGPLSPDSGKVNEQANVGET
PIFMDCTTESLEVGGLPDQAARAALPAVGLVGLKNDGKGKAAVFEGVVADNWVVLSGSLSEEGGLSLLALKPWGEGAGPEGIKILRSGSVYQIVDS