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Lag0000873 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000873
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein-serine/threonine phosphatase
Genome locationchr4:18605691..18609414
RNA-Seq ExpressionLag0000873
SyntenyLag0000873
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0006470 - protein dephosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0106306 - protein serine/threonine phosphatase activity (molecular function)
GO:0106307 - protein serine/threonine phosphatase activity (molecular function)
InterPro domainsIPR006811 - RNA polymerase II subunit A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607390.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1281.63Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
        +  F + I DLNTRDH L KTVLIVNLEVKDNHEEAAIGARLTFDLCQE
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
XP_004137380.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucumis sativus]2.8e-1277.36Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
        +  F + I DLNTRDHA+ KTVLIVNLEVKDNHEEAAIGARLTFDLCQE + T
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
XP_008446784.1 PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucumis melo]1.6e-1279.25Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
        +  F + I DLNTRDHAL KTVLIVNLEVKDNHEEAAIGARLTFDLCQE + T
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
XP_022137335.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Momordica charantia]4.8e-1277.36Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
        +  F + I DLNTRDH L KTVLIVNLEVKDNHEEAAIGARLTFDLCQE + T
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
XP_038895501.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1 [Benincasa hispida]6.2e-1277.36Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
        +  F + I DLNTRDHAL KTVLIVNLEVKDNHEEAAIGARL FDLCQE + T
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
TrEMBL top hitse value%identityAlignment
A0A1S3BFX9 Protein-serine/threonine phosphatase7.9e-1379.25Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
        +  F + I DLNTRDHAL KTVLIVNLEVKDNHEEAAIGARLTFDLCQE + T
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
A0A540NFV6 Protein-serine/threonine phosphatase1.3e-1071.43Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
        +  F + + DLN RDH LRK VLI+NLEVKDNHEEAA+GARL FDLCQE
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
A0A6J1C6C8 Protein-serine/threonine phosphatase2.3e-1277.36Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
        +  F + I DLNTRDH L KTVLIVNLEVKDNHEEAAIGARLTFDLCQE + T
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPT
A0A6J1G9U0 Protein-serine/threonine phosphatase3.9e-1281.63Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
        +  F + I DLNTRDH L KTVLIVNLEVKDNHEEAAIGARLTFDLCQE
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
A0A6J1K8Q5 Protein-serine/threonine phosphatase5.1e-1281.63Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
        +  F + I DLNTRDHAL KTVLIVNLEVKDNHEEAAIGARLTF+LCQE
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73820.1 Ssu72-like family protein1.2e-1059.18Show/hide
Query:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE
        +  F   + DLN R+ +L KT+L++NLEVKDNHEEAAIG RL  +LCQE
Subjt:  KSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAGGAAAAAGATGAAATCAACATTTTCTGTTTCCATCTTTGATCTCAACACTCGTGATCATGCACTGAGGAAAACTGTACTGATTGTAAATTTGGAGGTAAAAGA
TAACCACGAGGAGGCAGCTATAGGAGCACGACTTACTTTTGATCTTTGCCAAGAGCGTGATCCTACTGGAGTACGGAATATGAACTGCTGCAACTTTCTGCGATCAGGTG
ATGGTTATGCGTGGGCACGACTTTTTCTCAACCGTTACTTGTTTCTCCGCCAACACCATTCGCGATTGTCTCCTTCTTTCATCATCTCCAACCATAGCTCCCGCAACGAC
GACGTGACCCATGGCTTCGAAGGCGATACGATTGCTCTTCGACTACTCGCGAATAAACTCGACTCGTGCACGATTGTGTGTATTCCAGCAGGCGTCTGTGGATTTCTTCG
CTTTCGCCCCAAGTTGGAGCTTAGTCCTATATGTTTCGATGTATTCGAATACCATCAAGCAAGCGTTCAACCTCGTTTGGTGCCTCGGATAAAAATGGTCGAGGGGTGGT
ATGTCACCAATGGATTAAGAAGAGCATCAGGTGCCTTGGTTAATATATGGCCAAGGGGTGATGCACAGTTCGAGGCCTTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAA
CGTCAAGGCCCTGGGTGTGAGCCACTTACTCAGTACCGTGGCTTTTGTACTGATCCACCACCAGGTTTTGTAGGTGATGGGATCATACTTGGACTTGGTGATGAAGAGGA
GACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAGGAAAAAGATGAAATCAACATTTTCTGTTTCCATCTTTGATCTCAACACTCGTGATCATGCACTGAGGAAAACTGTACTGATTGTAAATTTGGAGGTAAAAGA
TAACCACGAGGAGGCAGCTATAGGAGCACGACTTACTTTTGATCTTTGCCAAGAGCGTGATCCTACTGGAGTACGGAATATGAACTGCTGCAACTTTCTGCGATCAGGTG
ATGGTTATGCGTGGGCACGACTTTTTCTCAACCGTTACTTGTTTCTCCGCCAACACCATTCGCGATTGTCTCCTTCTTTCATCATCTCCAACCATAGCTCCCGCAACGAC
GACGTGACCCATGGCTTCGAAGGCGATACGATTGCTCTTCGACTACTCGCGAATAAACTCGACTCGTGCACGATTGTGTGTATTCCAGCAGGCGTCTGTGGATTTCTTCG
CTTTCGCCCCAAGTTGGAGCTTAGTCCTATATGTTTCGATGTATTCGAATACCATCAAGCAAGCGTTCAACCTCGTTTGGTGCCTCGGATAAAAATGGTCGAGGGGTGGT
ATGTCACCAATGGATTAAGAAGAGCATCAGGTGCCTTGGTTAATATATGGCCAAGGGGTGATGCACAGTTCGAGGCCTTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAA
CGTCAAGGCCCTGGGTGTGAGCCACTTACTCAGTACCGTGGCTTTTGTACTGATCCACCACCAGGTTTTGTAGGTGATGGGATCATACTTGGACTTGGTGATGAAGAGGA
GACGTGA
Protein sequenceShow/hide protein sequence
MWRKKMKSTFSVSIFDLNTRDHALRKTVLIVNLEVKDNHEEAAIGARLTFDLCQERDPTGVRNMNCCNFLRSGDGYAWARLFLNRYLFLRQHHSRLSPSFIISNHSSRND
DVTHGFEGDTIALRLLANKLDSCTIVCIPAGVCGFLRFRPKLELSPICFDVFEYHQASVQPRLVPRIKMVEGWYVTNGLRRASGALVNIWPRGDAQFEAFKGRTLSAVEK
RQGPGCEPLTQYRGFCTDPPPGFVGDGIILGLGDEEET