; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000881 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000881
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr4:18801641..18802645
RNA-Seq ExpressionLag0000881
SyntenyLag0000881
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7824053.1 hypothetical protein G2W53_022197 [Senna tora]6.2e-1737.59Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPL--LFEMRK
        GDFNEIMF  EK GG  K+++ + AFR+A +HCG   + F G PFTW    ++ ++++E LDR    +   LK     VNH++   SDH  L   F+   
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPL--LFEMRK

Query:  ENHCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMIS
         ++ H RR+ L  ++FEE   + E C +++   W G D  S
Subjt:  ENHCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMIS

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]4.9e-2236.67Show/hide
Query:  MGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRK
        +GGDFNEI+F+ EK  G  +    +  F++ +  CGL    F GD FTW    K    + E LDRFL+        E   + HL F  SDHRP+L E   
Subjt:  MGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRK

Query:  ENHCHV-RRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI
             V RRK  +P++FEE   +F+EC  I+++ W     +       KI   ++ +  WN  RL GSL+GAI + E +I
Subjt:  ENHCHV-RRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI

XP_022841874.1 uncharacterized protein LOC111365549 [Olea europaea var. sylvestris]6.2e-1729.61Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN
        GDFNEI+ ++EKWGG  +  +QL  F++    C L  + F G  +TWY    ++N + E LDRF+  D       +A+V H +   SDHRPL  +++  +
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN

Query:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDIFQ
              K  KP++FE   +  + C++I+  +W      ++ ++   I      + LWNR++  G ++  + K    + Q
Subjt:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDIFQ

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.3e-1934.64Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEM--RK
        GDFNEI+ + +K GG  +   Q+ AF+N I  C L  + FTG+ FTW +N  N N +KE LD  ++ +          + HL+++ SDHR L+  M  R 
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEM--RK

Query:  ENHCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI
        +N   + RK  + ++FE       EC +I+K  W      S+N + + IQR   +++LW+R +  GSL   I +T   I
Subjt:  ENHCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI

XP_040996052.1 uncharacterized protein LOC121242226 [Juglans microcarpa x Juglans regia]1.1e-1632.97Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN
        GDFNEI +  EK G   + +KQ+  F+  +S CG   + + GD FTW  N +     KE LDR    +    K     V+HL   QSDH+PLL + + ++
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN

Query:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMAL-------WNRNRLKGSLKGAIAKTEK
        + H R K    +K+E    + E+C +I+KK W      S  +    IQR ++ +         WNR+  K   +   AKT+K
Subjt:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMAL-------WNRNRLKGSLKGAIAKTEK

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224232.4e-2236.67Show/hide
Query:  MGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRK
        +GGDFNEI+F+ EK  G  +    +  F++ +  CGL    F GD FTW    K    + E LDRFL+        E   + HL F  SDHRP+L E   
Subjt:  MGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRK

Query:  ENHCHV-RRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI
             V RRK  +P++FEE   +F+EC  I+++ W     +       KI   ++ +  WN  RL GSL+GAI + E +I
Subjt:  ENHCHV-RRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI

A0A803LZT1 Uncharacterized protein5.1e-1732.16Show/hide
Query:  MGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRK
        +GGDFN ++   EK GG    N++   FR AI HC LE + + G  FTW  N     +++E LDRFL     + +   + V HL   +SDH P+L  +++
Subjt:  MGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRK

Query:  ENHCHVRRKALKPYKFEETMVNFEECNNILKKEW--GGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLK
          +   +RK  K Y+FEE  +  E C++I+ + W  GG       +L +KI  +   ++ W++ + +  +K
Subjt:  ENHCHVRRKALKPYKFEETMVNFEECNNILKKEW--GGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLK

A0A803NMB3 Uncharacterized protein1.1e-1629.21Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN
        GDFNEI  +  K GG  +  KQ+  FR  + HC L    F G+P+TW +N    N+VKE LD   + +L  +       +HL+++ SDHR +   +    
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN

Query:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMIS-VNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI
            + K    ++FE+  ++  EC  ++ + W        V  L + +     S+  W+R++  GS+K  IA+T+  +
Subjt:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMIS-VNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDI

A0A803NZC3 Uncharacterized protein2.5e-1629.81Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN
        GDFNE++  ++K GGP +   Q+ AFRNA+ +CGL  + F GD +TW+     +++VKE LD                V HL+F  SDHR LL  +   N
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN

Query:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNR
           V +K    ++F++  +  ++C++I+ + W    +   + +   +     ++ LW+R++
Subjt:  HCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNR

A0A803PQM1 Uncharacterized protein2.5e-1628.33Show/hide
Query:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN
        GDFNEI+++  K GG  +   Q+  FR+ +  C L  ++FTG+PFTW ++     +++E LD     DL     +    +HL+F+ SDHR +   +   N
Subjt:  GDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDPFTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKEN

Query:  HCHVRRKALKP-YKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDIFQ
          H ++ A K  ++FE+  +  EE   ++K  W  V    + +  + +     ++  W+ ++  G +K  I+K +K + Q
Subjt:  HCHVRRKALKP-YKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSMALWNRNRLKGSLKGAIAKTEKDIFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCCAAGAGTGCCGAGAAGAAGGCGAAAGGGGAGGACTCCAAGCCATGGAGGTCTGACTGTAGAGAAGAAAACAATGAAACTACGAAAGGAAATAACAGGAAAGC
CGAAGGCAAAGACCACAAAGAAGATATCAGTGGAGAGACCGACAAAGGAAAAGATCTGAATTCAAAGGAGAAGGAACATCGGATGGGCGGGGATTTCAACGAGATAATGT
TTGACGATGAGAAGTGGGGAGGCCCTTGCAAAGCCAACAAGCAGTTGGTAGCTTTTAGAAACGCTATTAGTCATTGCGGGCTTGAGGTGGTGGACTTTACAGGAGACCCC
TTCACGTGGTATAGGAACCCAAAGAACAGCAACTCAGTTAAAGAGTGCCTGGACAGATTTCTAATGGCGGATCTTGACAAACTTAAGGTGGAAAAAGCCATAGTCAACCA
CCTTAATTTCCACCAATCTGATCACAGACCTTTACTTTTCGAAATGAGGAAAGAAAATCATTGCCATGTGAGAAGGAAAGCTCTTAAGCCGTACAAATTTGAAGAAACTA
TGGTTAACTTTGAAGAATGCAACAACATTCTAAAAAAAGAATGGGGTGGAGTTGATATGATTTCGGTTAACAATTTGAATGCCAAAATCCAGCGTAGTATAAAAAGCATG
GCCTTGTGGAATAGAAATAGGCTAAAAGGCTCGTTGAAGGGAGCGATTGCCAAGACTGAAAAGGATATTTTTCAGAATGCAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCCAAGAGTGCCGAGAAGAAGGCGAAAGGGGAGGACTCCAAGCCATGGAGGTCTGACTGTAGAGAAGAAAACAATGAAACTACGAAAGGAAATAACAGGAAAGC
CGAAGGCAAAGACCACAAAGAAGATATCAGTGGAGAGACCGACAAAGGAAAAGATCTGAATTCAAAGGAGAAGGAACATCGGATGGGCGGGGATTTCAACGAGATAATGT
TTGACGATGAGAAGTGGGGAGGCCCTTGCAAAGCCAACAAGCAGTTGGTAGCTTTTAGAAACGCTATTAGTCATTGCGGGCTTGAGGTGGTGGACTTTACAGGAGACCCC
TTCACGTGGTATAGGAACCCAAAGAACAGCAACTCAGTTAAAGAGTGCCTGGACAGATTTCTAATGGCGGATCTTGACAAACTTAAGGTGGAAAAAGCCATAGTCAACCA
CCTTAATTTCCACCAATCTGATCACAGACCTTTACTTTTCGAAATGAGGAAAGAAAATCATTGCCATGTGAGAAGGAAAGCTCTTAAGCCGTACAAATTTGAAGAAACTA
TGGTTAACTTTGAAGAATGCAACAACATTCTAAAAAAAGAATGGGGTGGAGTTGATATGATTTCGGTTAACAATTTGAATGCCAAAATCCAGCGTAGTATAAAAAGCATG
GCCTTGTGGAATAGAAATAGGCTAAAAGGCTCGTTGAAGGGAGCGATTGCCAAGACTGAAAAGGATATTTTTCAGAATGCAGGCTAG
Protein sequenceShow/hide protein sequence
MWSKSAEKKAKGEDSKPWRSDCREENNETTKGNNRKAEGKDHKEDISGETDKGKDLNSKEKEHRMGGDFNEIMFDDEKWGGPCKANKQLVAFRNAISHCGLEVVDFTGDP
FTWYRNPKNSNSVKECLDRFLMADLDKLKVEKAIVNHLNFHQSDHRPLLFEMRKENHCHVRRKALKPYKFEETMVNFEECNNILKKEWGGVDMISVNNLNAKIQRSIKSM
ALWNRNRLKGSLKGAIAKTEKDIFQNAG