; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000882 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000882
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr4:18802711..18803064
RNA-Seq ExpressionLag0000882
SyntenyLag0000882
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU39028.1 hypothetical protein TSUD_59840 [Trifolium subterraneum]2.0e-1034.68Show/hide
Query:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL
        SR  WLK  DKNTK+FH +                      G+D   G  + +F++L +SSN        V EA+   +S+++  W  + +N EE+ +A+
Subjt:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL

Query:  KGMSPTKAPAPGGAHALFFQRYWF
          M P KAP P G  ALFFQ+YW+
Subjt:  KGMSPTKAPAPGGAHALFFQRYWF

KAA3466354.1 reverse transcriptase [Gossypium australe]4.5e-1040.48Show/hide
Query:  SREEWLKWSDKNTKWFHSRLVIGRDLTI-------------------GFAVHYFNSLVSSSNSNLVAN-GKVTEALTTKISEEESSWLDKDFNEEEIVKA
        +R  WL+  DKN+ +FH    I R   +                     A  +F  L SS     VAN  KV E +  KI+EE ++ L   F EEEI KA
Subjt:  SREEWLKWSDKNTKWFHSRLVIGRDLTI-------------------GFAVHYFNSLVSSSNSNLVAN-GKVTEALTTKISEEESSWLDKDFNEEEIVKA

Query:  LKGMSPTKAPAPGGAHALFFQRYWFF
        LK M PTKAP P G  ALF+QRYW F
Subjt:  LKGMSPTKAPAPGGAHALFFQRYWFF

PNX92710.1 ribonuclease H [Trifolium pratense]5.9e-1037.1Show/hide
Query:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSN-SNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKA
        SR  WLK  D+NTK+FH++                      G        ++YF  L +SSN SN+ A  +V +    K+SEE  +W + DF+ EEI +A
Subjt:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSN-SNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKA

Query:  LKGMSPTKAPAPGGAHALFFQRYW
        +  M P KAP P G  ALF+Q+YW
Subjt:  LKGMSPTKAPAPGGAHALFFQRYW

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]1.2e-1034.96Show/hide
Query:  SREEWLKWSDKNTKWFHSR--------LVIG-----------RDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL
        ++  WLK  D+NTK+FH++         ++G            +     A+ YFN++ SSS+ + +   +VTEA+  K++EE +  L ++F +EE+  AL
Subjt:  SREEWLKWSDKNTKWFHSR--------LVIG-----------RDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL

Query:  KGMSPTKAPAPGGAHALFFQRYW
        K + P KAP P G  A+FFQ+YW
Subjt:  KGMSPTKAPAPGGAHALFFQRYW

XP_030939839.1 uncharacterized protein LOC115964720 [Quercus lobata]9.1e-1137.4Show/hide
Query:  SREEWLKWSDKNTKWFHSR--------LVIG-----------RDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL
        SR +WLK  D+NTK+FH R         ++G            D     AV YF ++ +SS     +   VT A+ T++++E +  L K+F+++EI+ AL
Subjt:  SREEWLKWSDKNTKWFHSR--------LVIG-----------RDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL

Query:  KGMSPTKAPAPGGAHALFFQRYW
        K M PTKAP P G  A+FF +YW
Subjt:  KGMSPTKAPAPGGAHALFFQRYW

TrEMBL top hitse value%identityAlignment
A0A2K3MPI1 Ribonuclease H2.8e-1037.1Show/hide
Query:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSN-SNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKA
        SR  WLK  D+NTK+FH++                      G        ++YF  L +SSN SN+ A  +V +    K+SEE  +W + DF+ EEI +A
Subjt:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSN-SNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKA

Query:  LKGMSPTKAPAPGGAHALFFQRYW
        +  M P KAP P G  ALF+Q+YW
Subjt:  LKGMSPTKAPAPGGAHALFFQRYW

A0A2N9I335 Reverse transcriptase domain-containing protein1.5e-1136.59Show/hide
Query:  SREEWLKWSDKNTKWFHSRLVIGRDLTI-------------------GFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL
        SR  W++  DKNTK+FH+     R++ +                     AV YF S+ SSSN          + L   ++EE ++ L +DFN EE+ +AL
Subjt:  SREEWLKWSDKNTKWFHSRLVIGRDLTI-------------------GFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL

Query:  KGMSPTKAPAPGGAHALFFQRYW
        K M PTKAP P G  A+F+Q YW
Subjt:  KGMSPTKAPAPGGAHALFFQRYW

A0A2Z6N2E1 Uncharacterized protein9.8e-1134.68Show/hide
Query:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL
        SR  WLK  DKNTK+FH +                      G+D   G  + +F++L +SSN        V EA+   +S+++  W  + +N EE+ +A+
Subjt:  SREEWLKWSDKNTKWFHSRLV-------------------IGRDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL

Query:  KGMSPTKAPAPGGAHALFFQRYWF
          M P KAP P G  ALFFQ+YW+
Subjt:  KGMSPTKAPAPGGAHALFFQRYWF

A0A5B6VBB6 Reverse transcriptase2.2e-1040.48Show/hide
Query:  SREEWLKWSDKNTKWFHSRLVIGRDLTI-------------------GFAVHYFNSLVSSSNSNLVAN-GKVTEALTTKISEEESSWLDKDFNEEEIVKA
        +R  WL+  DKN+ +FH    I R   +                     A  +F  L SS     VAN  KV E +  KI+EE ++ L   F EEEI KA
Subjt:  SREEWLKWSDKNTKWFHSRLVIGRDLTI-------------------GFAVHYFNSLVSSSNSNLVAN-GKVTEALTTKISEEESSWLDKDFNEEEIVKA

Query:  LKGMSPTKAPAPGGAHALFFQRYWFF
        LK M PTKAP P G  ALF+QRYW F
Subjt:  LKGMSPTKAPAPGGAHALFFQRYWFF

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.0e-1240.65Show/hide
Query:  SREEWLKWSDKNTKWFHSR--------LVIG-----------RDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL
        S+  WLK  D+NTK+FH+R         + G           RD     AV YF  + S+SN ++V   +VT A+ T I+EE ++ L + F  EEIV AL
Subjt:  SREEWLKWSDKNTKWFHSR--------LVIG-----------RDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKAL

Query:  KGMSPTKAPAPGGAHALFFQRYW
        K + PTK+P P G  A+FFQ+YW
Subjt:  KGMSPTKAPAPGGAHALFFQRYW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGATCTACTGGAAAATTTTGTTCTAGAGAGGAGTGGTTAAAATGGAGTGACAAGAACACCAAATGGTTCCACTCCAGGCTAGTCATAGGAAGAGATCTAACCAT
AGGGTTTGCGGTTCATTATTTCAACTCCCTCGTTTCTTCTTCTAATTCAAATCTTGTGGCTAATGGGAAAGTGACAGAGGCGTTGACTACAAAAATCAGTGAGGAAGAAT
CAAGTTGGCTGGACAAAGACTTCAATGAAGAAGAGATTGTCAAAGCTTTAAAAGGTATGAGTCCCACCAAAGCTCCGGCTCCTGGCGGAGCTCATGCTTTATTCTTTCAA
AGATATTGGTTTTTTGCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGATCTACTGGAAAATTTTGTTCTAGAGAGGAGTGGTTAAAATGGAGTGACAAGAACACCAAATGGTTCCACTCCAGGCTAGTCATAGGAAGAGATCTAACCAT
AGGGTTTGCGGTTCATTATTTCAACTCCCTCGTTTCTTCTTCTAATTCAAATCTTGTGGCTAATGGGAAAGTGACAGAGGCGTTGACTACAAAAATCAGTGAGGAAGAAT
CAAGTTGGCTGGACAAAGACTTCAATGAAGAAGAGATTGTCAAAGCTTTAAAAGGTATGAGTCCCACCAAAGCTCCGGCTCCTGGCGGAGCTCATGCTTTATTCTTTCAA
AGATATTGGTTTTTTGCTTATTAA
Protein sequenceShow/hide protein sequence
MRRSTGKFCSREEWLKWSDKNTKWFHSRLVIGRDLTIGFAVHYFNSLVSSSNSNLVANGKVTEALTTKISEEESSWLDKDFNEEEIVKALKGMSPTKAPAPGGAHALFFQ
RYWFFAY