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Lag0000891 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000891
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr4:19065002..19065440
RNA-Seq ExpressionLag0000891
SyntenyLag0000891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032390.1 uncharacterized protein E6C27_scaffold219G002650 [Cucumis melo var. makuwa]2.5e-0434.21Show/hide
Query:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNG
        K++N  E+LQ++F N ++S +  C CL+ ++ T     LHC     +G + LLN  G+ SC  + ++DW++  +NG
Subjt:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNG
KAA0056469.1 uncharacterized protein E6C27_scaffold186G002430 [Cucumis melo var. makuwa]1.8e-0532.61Show/hide
Query:  QVSSPLAGKNINTHERLQKRFGNWTISSSICCFCLKD-QVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGF
        ++      +++NTHE+LQ++F   ++S S+CC CLK+ + L   F  LHC  +  +GW    +  G+ S     ++DWM++ ++G    RGF
Subjt:  QVSSPLAGKNINTHERLQKRFGNWTISSSICCFCLKD-QVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGF
TYJ96358.1 uncharacterized protein E5676_scaffold1159G00180 [Cucumis melo var. makuwa]1.5e-0432.56Show/hide
Query:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGFVEM
        K++N  E+LQ++F N ++S +  C CL+ ++ T     LHC     +G + LLN  G+ SC  + ++DW++  +N S+   G  E+
Subjt:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGFVEM
TrEMBL top hitse value%identityAlignment
A0A5A7SNM9 Uncharacterized protein1.2e-0434.21Show/hide
Query:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNG
        K++N  E+LQ++F N ++S +  C CL+ ++ T     LHC     +G + LLN  G+ SC  + ++DW++  +NG
Subjt:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNG
A0A5D3BDR5 Uncharacterized protein7.2e-0532.56Show/hide
Query:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGFVEM
        K++N  E+LQ++F N ++S +  C CL+ ++ T     LHC     +G + LLN  G+ SC  + ++DW++  +N S+   G  E+
Subjt:  KNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGFVEM
A0A5D3E019 zf-RVT domain-containing protein8.5e-0632.61Show/hide
Query:  QVSSPLAGKNINTHERLQKRFGNWTISSSICCFCLKD-QVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGF
        ++      +++NTHE+LQ++F   ++S S+CC CLK+ + L   F  LHC  +  +GW    +  G+ S     ++DWM++ ++G    RGF
Subjt:  QVSSPLAGKNINTHERLQKRFGNWTISSSICCFCLKD-QVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAACCTGGGTCGTTGAGCCTTCAGGTTAGTTCTCCTCTAGCAGGGAAGAATATTAATACACATGAGAGGCTTCAAAAAAGATTTGGAAATTGGACCATATCCTC
CTCAATTTGCTGCTTCTGTTTAAAGGATCAAGTGTTAACCACCTTTTTCTCCAGTCTCCATTGCCATATGCTTCCGCCACAGGGTTGGAGCTTTCTGTTGAATGAAGTTG
GAATGTTTAGTTGTTCGGCTAGACCAGTAGAAGATTGGATGCTCAAGGCTGTCAATGGATCAAAGGAAAGTAGAGGTTTTGTGGAGATGTGCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAACCTGGGTCGTTGAGCCTTCAGGTTAGTTCTCCTCTAGCAGGGAAGAATATTAATACACATGAGAGGCTTCAAAAAAGATTTGGAAATTGGACCATATCCTC
CTCAATTTGCTGCTTCTGTTTAAAGGATCAAGTGTTAACCACCTTTTTCTCCAGTCTCCATTGCCATATGCTTCCGCCACAGGGTTGGAGCTTTCTGTTGAATGAAGTTG
GAATGTTTAGTTGTTCGGCTAGACCAGTAGAAGATTGGATGCTCAAGGCTGTCAATGGATCAAAGGAAAGTAGAGGTTTTGTGGAGATGTGCCTCTAG
Protein sequenceShow/hide protein sequence
MGQPGSLSLQVSSPLAGKNINTHERLQKRFGNWTISSSICCFCLKDQVLTTFFSSLHCHMLPPQGWSFLLNEVGMFSCSARPVEDWMLKAVNGSKESRGFVEMCL