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Lag0000909 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000909
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:19444609..19444940
RNA-Seq ExpressionLag0000909
SyntenyLag0000909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]8.9e-0544.62Show/hide
Query:  VHYAPLLALRKSWFKQFIPATHVRRINGNSHSEGVTPEYYQWRIKRSKIPITTCDNVEESSNKPS
        V+Y PLL LR+ W KQFIP TH  +I    H EGVT  Y  W+  R K  I     V E   + S
Subjt:  VHYAPLLALRKSWFKQFIPATHVRRINGNSHSEGVTPEYYQWRIKRSKIPITTCDNVEESSNKPS
TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein4.3e-0544.62Show/hide
Query:  VHYAPLLALRKSWFKQFIPATHVRRINGNSHSEGVTPEYYQWRIKRSKIPITTCDNVEESSNKPS
        V+Y PLL LR+ W KQFIP TH  +I    H EGVT  Y  W+  R K  I     V E   + S
Subjt:  VHYAPLLALRKSWFKQFIPATHVRRINGNSHSEGVTPEYYQWRIKRSKIPITTCDNVEESSNKPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGAGCTTCCACACAGTCCCTTTAGTAGGCCTTGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGAAAAGTTGGTTTAAACAGTTCATACCAGCAACTCATGTTAGAAG
GATAAATGGCAATAGTCACTCCGAGGGAGTTACTCCAGAATATTATCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTTGTGACAATGTGGAAGAATCATCTA
ATAAGCCTAGCCAGCTAGCGACAGAGTAG
mRNA sequenceShow/hide mRNA sequence
GCGGAGCTTCCACACAGTCCCTTTAGTAGGCCTTGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGAAAAGTTGGTTTAAACAGTTCATACCAGCAACTCATGTTAGAAG
GATAAATGGCAATAGTCACTCCGAGGGAGTTACTCCAGAATATTATCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTTGTGACAATGTGGAAGAATCATCTA
ATAAGCCTAGCCAGCTAGCGACAGAGTAG
Protein sequenceShow/hide protein sequence
AELPHSPFSRPCVHYAPLLALRKSWFKQFIPATHVRRINGNSHSEGVTPEYYQWRIKRSKIPITTCDNVEESSNKPSQLATE