; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000910 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000910
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:19456382..19457590
RNA-Seq ExpressionLag0000910
SyntenyLag0000910
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]2.9e-10150.49Show/hide
Query:  MEEKG-EQEKTKRDIEEIREKVDAI--IVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQH-TTYNPLYDIPVGQYPFPSFKEGQI
        MEEK  + +K +++I  I E+V  I  ++++ KGK+  DTT    PI +    + +PP F  +     ++   QH    +PLY +P              
Subjt:  MEEKG-EQEKTKRDIEEIREKVDAI--IVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQH-TTYNPLYDIPVGQYPFPSFKEGQI

Query:  PQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIV
        P +P     G  + + + +KI          ++ +   T + +KL+VLE+RLRA+EGT V+GN+DATQLCLVP ++IP KFK+PEF+KYDG+TCP+SH++
Subjt:  PQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIV

Query:  MYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKE
        MYCRKMA H++NDKLL+HCFQD+L GPA+RWY+QLD++H+  WK+LAD+FLKQYKHNID+APNRLDLQRMEKKS+E FK+YA RW+D TA+VQPPLTDKE
Subjt:  MYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKE

Query:  LSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAK-TAESLSTKTGNTSKKKKGEVQMIGKVD----KSL---RQIHQPMAQYPSN--Y
        ++++ +NTLR+PFYE M+G+ASTNFSDI+ IGERIEYGIKHGR+A+ T E    K G  SKKK+GE+  IG  +    KS+   R+  Q    Y SN  Y
Subjt:  LSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAK-TAESLSTKTGNTSKKKKGEVQMIGKVD----KSL---RQIHQPMAQYPSN--Y

Query:  LPTYGYYP
        +P   Y P
Subjt:  LPTYGYYP

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]5.7e-11364.12Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQL
        MPQ+TTYNPLYD+PVGQY  P  K  Q  QIP        + +PE    P  V NL D   K +      PSNEK EVL++RLRA+E T VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQL

Query:  CLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQR
        C V  +VIPPK K+PEFEKY+G++CPK+H+ MYCRKMA +V NDKLLIHCFQD+L GPA+RWYMQLDSSHV +WKNLADSFLKQYKHNID+AP+RLDLQR
Subjt:  CLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQR

Query:  MEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQM
        MEKKST+ FK+YA RWRDT AQVQPPL DKELSA+ INTL+ PFY+ M+GSASTNFSDIMTIGERIEYG++HGRI  T  E L+ K  + SKKK+GEVQM
Subjt:  MEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQM

Query:  IGKVDKSLR-QIHQPMAQYPSNYLPT-YGYYPHQVNNASA
        +G    S + Q ++   QY   Y PT YGY    VNNA++
Subjt:  IGKVDKSLR-QIHQPMAQYPSNYLPT-YGYYPHQVNNASA

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]9.7e-12158.44Show/hide
Query:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSF---ASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQ
        + K EQEKT++DIEE+REK+DAI++ALEKGK IA+T+ P      PQ    F PSF       R   E  M Q+TTYNPLYDIP GQ+P P    G  PQ
Subjt:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSF---ASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQ

Query:  IPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKE---LATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHI
         P    AG  + +PE    P  V NL  P+  K+      PS+EKLEVLE+RLRAVEGT VFGN+DA+QLCL   +VIPPKFK+PEFEKY+G++CPK+H+
Subjt:  IPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKE---LATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHI

Query:  VMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDK
        +MYCRKMA ++ NDKLLIHCFQD+L GP + WYM LDS HV +WKNLADSFLKQYKHNID+  +RLDLQ MEKK+ E FK+Y  RWRDT AQ QPP TDK
Subjt:  VMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDK

Query:  ELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKT-AESLSTKTGNTSKKKKGEVQMIGKVDKSLRQ-IHQPMAQYPSNYLPT-YGY
        ELS++ INTL+ PFY+ M+GSAST+FSDI+TIGERIEYG+ HGRI  T  ES + K   +SKKK+GEVQM+G      RQ  +     Y   Y P+ YGY
Subjt:  ELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKT-AESLSTKTGNTSKKKKGEVQMIGKVDKSLRQ-IHQPMAQYPSNYLPT-YGY

Query:  YPHQVNNAS
            VN A+
Subjt:  YPHQVNNAS

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.9e-12463.29Show/hide
Query:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPM
        ++K EQEKT++DIEE+REK+D I + LEKGK  AD  T   PI  PQ + P+PP +   +R   E  MPQ+TTYNPLYD+P+GQYP    K  Q  QIP 
Subjt:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPM

Query:  ASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMY
               + +PE    P  V NL     K +       S EK EVLE+RLRA+EGT VFGN+DA+QLCLV  +VIPPKFK+PEFEKYDG++CPK+H++MY
Subjt:  ASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMY

Query:  CRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELS
        CRKM  +V N KLLIHCFQD+L G A+RWYMQLDSSHV +WKNLADSFLKQYKHNID+AP+RLDLQRMEK STE FK+YA RWRDT AQVQPPLTDKELS
Subjt:  CRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELS

Query:  AIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEV
        A+ INTL+ PFY+ M+GSASTNFSDIMTIGERIEYG++H RI  TA E L+ K  + SKKK+GE+
Subjt:  AIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEV

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]2.0e-10568.26Show/hide
Query:  PFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIH
        P  V NL     K +L     PSNEK EVLE+RLRA+EGT VFGN+DA+QLCLV  +VIPPKFK+PEFEKYDG++CPK+H++MYCRKMA +V NDKLLIH
Subjt:  PFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIH

Query:  CFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMV
        CFQD+L GPA+RWYMQLDSS+V +WKNLADSFLKQYKHNID+AP+RLDLQRMEKKSTE FK+YA RWRDT AQVQPPLTDKELSA+ INTL+ PFY+ M+
Subjt:  CFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMV

Query:  GSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQMIGKVDKSLRQIHQPMA---QYPSNYLPT-YGYYPHQVNNASA
        G+ASTNFSDIMTIGERIEYG++HGRI  T  E L+ K  + SKKK+GEVQM+G    S +Q  QP +   +Y   Y PT YGY    VNNA++
Subjt:  GSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQMIGKVDKSLRQIHQPMA---QYPSNYLPT-YGYYPHQVNNASA

TrEMBL top hitse value%identityAlignment
A0A5A7V3W7 Retrotrans_gag domain-containing protein1.4e-10150.49Show/hide
Query:  MEEKG-EQEKTKRDIEEIREKVDAI--IVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQH-TTYNPLYDIPVGQYPFPSFKEGQI
        MEEK  + +K +++I  I E+V  I  ++++ KGK+  DTT    PI +    + +PP F  +     ++   QH    +PLY +P              
Subjt:  MEEKG-EQEKTKRDIEEIREKVDAI--IVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQH-TTYNPLYDIPVGQYPFPSFKEGQI

Query:  PQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIV
        P +P     G  + + + +KI          ++ +   T + +KL+VLE+RLRA+EGT V+GN+DATQLCLVP ++IP KFK+PEF+KYDG+TCP+SH++
Subjt:  PQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIV

Query:  MYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKE
        MYCRKMA H++NDKLL+HCFQD+L GPA+RWY+QLD++H+  WK+LAD+FLKQYKHNID+APNRLDLQRMEKKS+E FK+YA RW+D TA+VQPPLTDKE
Subjt:  MYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKE

Query:  LSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAK-TAESLSTKTGNTSKKKKGEVQMIGKVD----KSL---RQIHQPMAQYPSN--Y
        ++++ +NTLR+PFYE M+G+ASTNFSDI+ IGERIEYGIKHGR+A+ T E    K G  SKKK+GE+  IG  +    KS+   R+  Q    Y SN  Y
Subjt:  LSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAK-TAESLSTKTGNTSKKKKGEVQMIGKVD----KSL---RQIHQPMAQYPSN--Y

Query:  LPTYGYYP
        +P   Y P
Subjt:  LPTYGYYP

A0A6J1D099 Ribonuclease H2.8e-11364.12Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQL
        MPQ+TTYNPLYD+PVGQY  P  K  Q  QIP        + +PE    P  V NL D   K +      PSNEK EVL++RLRA+E T VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQL

Query:  CLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQR
        C V  +VIPPK K+PEFEKY+G++CPK+H+ MYCRKMA +V NDKLLIHCFQD+L GPA+RWYMQLDSSHV +WKNLADSFLKQYKHNID+AP+RLDLQR
Subjt:  CLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQR

Query:  MEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQM
        MEKKST+ FK+YA RWRDT AQVQPPL DKELSA+ INTL+ PFY+ M+GSASTNFSDIMTIGERIEYG++HGRI  T  E L+ K  + SKKK+GEVQM
Subjt:  MEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQM

Query:  IGKVDKSLR-QIHQPMAQYPSNYLPT-YGYYPHQVNNASA
        +G    S + Q ++   QY   Y PT YGY    VNNA++
Subjt:  IGKVDKSLR-QIHQPMAQYPSNYLPT-YGYYPHQVNNASA

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222312.7e-12158.68Show/hide
Query:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSF---ASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQ
        + K EQEKT++DIEE+REK+DAI++ALEKGK IA+T+ P      PQ    F PSF       R   E  M Q+TTYNPLYDIP GQ+P P    G  PQ
Subjt:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSF---ASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQ

Query:  IPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKE---LATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHI
         P    AG  + +PE    P  V NL  P+  K+      PS+EKLEVLE+RLRAVEGT VFGN+DA+QLCL   +VIPPKFK+PEFEKYDG++CPK+H+
Subjt:  IPMASQAGASYFKPEFSKIPFAVPNLDDPEVKKE---LATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHI

Query:  VMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDK
        +MYCRKMA ++ NDKLLIHCFQD+L GP + WYM LDS HV +WKNLADSFLKQYKHNID+  +RLDLQ MEKK+ E FK+Y  RWRDT AQ QPP TDK
Subjt:  VMYCRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDK

Query:  ELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKT-AESLSTKTGNTSKKKKGEVQMIGKVDKSLRQ-IHQPMAQYPSNYLPT-YGY
        ELS++ INTL+ PFY+ M+GSAST+FSDI+TIGERIEYG+ HGRI  T  ES + K   +SKKK+GEVQM+G      RQ  +     Y   Y P+ YGY
Subjt:  ELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKT-AESLSTKTGNTSKKKKGEVQMIGKVDKSLRQ-IHQPMAQYPSNYLPT-YGY

Query:  YPHQVNNAS
            VN A+
Subjt:  YPHQVNNAS

A0A6J1DZ90 Ribonuclease H9.1e-12563.29Show/hide
Query:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPM
        ++K EQEKT++DIEE+REK+D I + LEKGK  AD  T   PI  PQ + P+PP +   +R   E  MPQ+TTYNPLYD+P+GQYP    K  Q  QIP 
Subjt:  EEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPM

Query:  ASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMY
               + +PE    P  V NL     K +       S EK EVLE+RLRA+EGT VFGN+DA+QLCLV  +VIPPKFK+PEFEKYDG++CPK+H++MY
Subjt:  ASQAGASYFKPEFSKIPFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMY

Query:  CRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELS
        CRKM  +V N KLLIHCFQD+L G A+RWYMQLDSSHV +WKNLADSFLKQYKHNID+AP+RLDLQRMEK STE FK+YA RWRDT AQVQPPLTDKELS
Subjt:  CRKMATHVHNDKLLIHCFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELS

Query:  AIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEV
        A+ INTL+ PFY+ M+GSASTNFSDIMTIGERIEYG++H RI  TA E L+ K  + SKKK+GE+
Subjt:  AIVINTLRSPFYEHMVGSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEV

A0A6J1E2J7 Ribonuclease H9.5e-10668.26Show/hide
Query:  PFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIH
        P  V NL     K +L     PSNEK EVLE+RLRA+EGT VFGN+DA+QLCLV  +VIPPKFK+PEFEKYDG++CPK+H++MYCRKMA +V NDKLLIH
Subjt:  PFAVPNLDDPEVKKELA---TPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIH

Query:  CFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMV
        CFQD+L GPA+RWYMQLDSS+V +WKNLADSFLKQYKHNID+AP+RLDLQRMEKKSTE FK+YA RWRDT AQVQPPLTDKELSA+ INTL+ PFY+ M+
Subjt:  CFQDNLEGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMV

Query:  GSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQMIGKVDKSLRQIHQPMA---QYPSNYLPT-YGYYPHQVNNASA
        G+ASTNFSDIMTIGERIEYG++HGRI  T  E L+ K  + SKKK+GEVQM+G    S +Q  QP +   +Y   Y PT YGY    VNNA++
Subjt:  GSASTNFSDIMTIGERIEYGIKHGRIAKTA-ESLSTKTGNTSKKKKGEVQMIGKVDKSLRQIHQPMA---QYPSNYLPT-YGYYPHQVNNASA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGTTGCTTTAGAAAAGGGCAAAATGATTGCAGATAC
GACTACACCAGATACTCCGATTGGAAACCCCCAAGCTAGCCTACCATTTCCACCTAGTTTCGCTTCACATGTTCGTACGACAGTAGAAGCGTCCATGCCACAACATACTA
CCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCATCATTTAAAGAAGGCCAAATCCCCCAAATCCCCATGGCTAGCCAAGCTGGTGCTTCTTATTTC
AAGCCAGAATTTTCTAAAATACCTTTTGCAGTCCCTAACTTAGATGACCCGGAAGTAAAGAAGGAGTTAGCCACGCCCTCTAATGAAAAACTGGAAGTTTTAGAGAAAAG
GTTGAGGGCAGTCGAAGGCACTAGTGTTTTTGGGAACATGGATGCCACACAATTATGCTTGGTTCCAGACGTTGTAATCCCACCGAAATTCAAACTGCCAGAATTTGAAA
AATATGACGGAACAACATGCCCTAAAAGTCACATTGTTATGTACTGTAGGAAGATGGCAACACACGTTCATAATGATAAGCTGCTTATACATTGCTTTCAGGACAACTTG
GAAGGTCCAGCCGCCCGTTGGTATATGCAGTTGGATAGTTCACATGTTGTCACATGGAAGAACTTGGCTGATTCCTTCCTCAAACAGTACAAGCACAATATTGATTTGGC
TCCCAACCGACTGGACTTACAGAGGATGGAAAAGAAGAGTACTGAAGACTTTAAAGATTATGCTCCAAGGTGGCGGGATACGACAGCTCAAGTCCAACCCCCTTTAACGG
ATAAGGAGCTTTCTGCCATAGTCATCAATACCCTAAGGTCCCCATTCTATGAACATATGGTTGGAAGTGCGTCGACCAATTTCTCTGATATCATGACAATTGGGGAAAGA
ATTGAGTACGGGATCAAACATGGTAGAATAGCTAAAACCGCTGAATCCTTAAGCACAAAGACGGGCAACACTTCAAAGAAGAAAAAGGGAGAGGTACAGATGATAGGGAA
GGTGGATAAGTCCCTTCGACAAATCCACCAACCCATGGCACAATATCCTTCGAATTATTTACCTACATACGGATACTATCCACACCAGGTGAATAATGCTTCAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGTTGCTTTAGAAAAGGGCAAAATGATTGCAGATAC
GACTACACCAGATACTCCGATTGGAAACCCCCAAGCTAGCCTACCATTTCCACCTAGTTTCGCTTCACATGTTCGTACGACAGTAGAAGCGTCCATGCCACAACATACTA
CCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCATCATTTAAAGAAGGCCAAATCCCCCAAATCCCCATGGCTAGCCAAGCTGGTGCTTCTTATTTC
AAGCCAGAATTTTCTAAAATACCTTTTGCAGTCCCTAACTTAGATGACCCGGAAGTAAAGAAGGAGTTAGCCACGCCCTCTAATGAAAAACTGGAAGTTTTAGAGAAAAG
GTTGAGGGCAGTCGAAGGCACTAGTGTTTTTGGGAACATGGATGCCACACAATTATGCTTGGTTCCAGACGTTGTAATCCCACCGAAATTCAAACTGCCAGAATTTGAAA
AATATGACGGAACAACATGCCCTAAAAGTCACATTGTTATGTACTGTAGGAAGATGGCAACACACGTTCATAATGATAAGCTGCTTATACATTGCTTTCAGGACAACTTG
GAAGGTCCAGCCGCCCGTTGGTATATGCAGTTGGATAGTTCACATGTTGTCACATGGAAGAACTTGGCTGATTCCTTCCTCAAACAGTACAAGCACAATATTGATTTGGC
TCCCAACCGACTGGACTTACAGAGGATGGAAAAGAAGAGTACTGAAGACTTTAAAGATTATGCTCCAAGGTGGCGGGATACGACAGCTCAAGTCCAACCCCCTTTAACGG
ATAAGGAGCTTTCTGCCATAGTCATCAATACCCTAAGGTCCCCATTCTATGAACATATGGTTGGAAGTGCGTCGACCAATTTCTCTGATATCATGACAATTGGGGAAAGA
ATTGAGTACGGGATCAAACATGGTAGAATAGCTAAAACCGCTGAATCCTTAAGCACAAAGACGGGCAACACTTCAAAGAAGAAAAAGGGAGAGGTACAGATGATAGGGAA
GGTGGATAAGTCCCTTCGACAAATCCACCAACCCATGGCACAATATCCTTCGAATTATTTACCTACATACGGATACTATCCACACCAGGTGAATAATGCTTCAGCGTAG
Protein sequenceShow/hide protein sequence
MEEKGEQEKTKRDIEEIREKVDAIIVALEKGKMIADTTTPDTPIGNPQASLPFPPSFASHVRTTVEASMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPMASQAGASYF
KPEFSKIPFAVPNLDDPEVKKELATPSNEKLEVLEKRLRAVEGTSVFGNMDATQLCLVPDVVIPPKFKLPEFEKYDGTTCPKSHIVMYCRKMATHVHNDKLLIHCFQDNL
EGPAARWYMQLDSSHVVTWKNLADSFLKQYKHNIDLAPNRLDLQRMEKKSTEDFKDYAPRWRDTTAQVQPPLTDKELSAIVINTLRSPFYEHMVGSASTNFSDIMTIGER
IEYGIKHGRIAKTAESLSTKTGNTSKKKKGEVQMIGKVDKSLRQIHQPMAQYPSNYLPTYGYYPHQVNNASA