| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN71553.1 hypothetical protein VITISV_034738 [Vitis vinifera] | 8.3e-112 | 45.52 | Show/hide |
Query: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
LL +K V S F++FK ++E QF+T I+ LQT+ G EF L L+ +GILHR S PY P+QNG VERK RHVVE
Subjt: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
Query: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
LY DY K+FGC C+P L+ N+NK Q RS C+FLGY+ S KGYLCL+ + R+Y+SRHVVF E +F FQ+L
Subjt: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
Query: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
S P H P PLPP+ P +++ ++T + +P S + SS+S PP + E+ P
Subjt: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
Query: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRY
+ + + I HPM+TRSK+ + K K +L + +T EP+ K+ALQD NWK AM+ EY+AL++N+TWSLVP P++ K++GCKWVF++K KP+GSIDRY
Subjt: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRY
Query: KARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKL
KARLVAQG+ Q GID+F+TFSPVVKP TIR+VLS+AVS W I+QLDVHNAFL+G+L EQV+M QP GF S P+HV +L KALYG+KQ+PRAWF KL
Subjt: KARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKL
Query: ISCLLEWGFLASKADASMFIFKSGS
S LL+ GF S+ADAS+F F S S
Subjt: ISCLLEWGFLASKADASMFIFKSGS
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| CAN73924.1 hypothetical protein VITISV_041509 [Vitis vinifera] | 9.5e-108 | 42.97 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L +K + F+ F+ M+E Q +T I+ +Q+D+G EF L ++GILH+ S P+ PQQNG ERK RH+VE
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
L+ + +Y L++FGC CFP LR Y +KL +RS CVFLGY+ + KGYLCLD+ + R+Y+SR+V+F+E SF FQS
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
Query: FVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPP--PTPALVLSESLPNQP
SS PS P SP + PS TP + P +AP A ++PI +S S PP P P S + P+ P
Subjt: FVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPP--PTPALVLSESLPNQP
Query: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
P +N HPMVTR+K+ + K ++++V T EP+ Y +A ++ +W AM++EY+AL+RN TWSLVP P+ +VGC+W++++K +PDGSIDR
Subjt: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
Query: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
+KARLVAQG+TQ GIDYF TFSPVVKP TIR++L+LAVSF W +RQLDV NAFL+G+L E+V+M QP GFV+ ++P++V KLHKALYG+KQ+PRAWF K
Subjt: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
Query: LISCLLEWGFLASKADASMFIFKSGS
L LL++GF +S+AD S+FIF + +
Subjt: LISCLLEWGFLASKADASMFIFKSGS
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| RVW64314.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.2e-112 | 43.51 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L SK +S+F++FK ++E QF ++I+ L++D+G EFK SS LA++GI + S PY P+QNG ERK RH++E
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
L+G++ +Y + K+FGC C+P++R YN NKL +RS +CVFLGYSS+ KGY+CL+ +GRLYV+RHVVF+E F FQS P
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
Query: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
V + P + L C SSP +S S T P+ PP P S+ S P L+ +P
Subjt: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
Query: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
+ HP+ N HPMVTR+K + K K + + EP + +A++DSNW AM+ E+ AL RN TW LVP P++ ++GCKWV+++K KPDG++DR
Subjt: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
Query: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
YKARLVAQG+TQ LG+DYF+TFSPVVK +TIRI+L++A+SF W + QLDV NAFLHG+L E V+M+QP GF+++ +PSHV KL+KALYG+KQ+PRAW++K
Subjt: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
Query: LISCLLEWGFLASKADASMFIFKS
L + LL WGF AS+AD+SMFI S
Subjt: LISCLLEWGFLASKADASMFIFKS
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| RVX06084.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.2e-112 | 43.51 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L SK +S+F++FK ++E QF ++I+ L++D+G EFK SS LA++GI + S PY P+QNG ERK RH++E
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
L+G++ +Y + K+FGC C+P++R YN NKL +RS +CVFLGYSS+ KGY+CL+ +GRLYV+RHVVF+E F FQS P
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
Query: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
V + P + L C SSP +S S T P+ PP P S+ S P L+ +P
Subjt: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
Query: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
+ HP+ N HPMVTR+K + K K + + EP + +A++DSNW AM+ E+ AL RN TW LVP P++ ++GCKWV+++K KPDG++DR
Subjt: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
Query: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
YKARLVAQG+TQ LG+DYF+TFSPVVK +TIRI+L++A+SF W + QLDV NAFLHG+L E V+M+QP GF+++ +PSHV KL+KALYG+KQ+PRAW++K
Subjt: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
Query: LISCLLEWGFLASKADASMFIFKS
L + LL WGF AS+AD+SMFI S
Subjt: LISCLLEWGFLASKADASMFIFKS
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| RVX14515.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.3e-112 | 45.64 | Show/hide |
Query: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
LL SK +S FL+FKVMIETQF TK+R LQTD G EF+ ++ L GILHR+SYP QQNG VERK+RHVVE
Subjt: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
Query: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
LY +YS L+++GC+C+PFLR +N +K +RS +C F+GY+S KGYLCL++ +G++++SRHV+F EL D
Subjt: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
Query: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
PF K S + + S HC + PL SP ITP + LP +++P S+ +PIS T S S SS P PT
Subjt: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
Query: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPV---TCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSI
PS+ S HPM TR+K +FKPK +L + CEP ++KEA++ W+ AM E+EAL+ NKTW LVP P ++ ++GC+WV+++K KPDG++
Subjt: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPV---TCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSI
Query: DRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWF
+RYKARLVA+G+ Q G DYF+TFSPVVKP TIR+VLSLA+S W IRQLDVHNAFL+G+L EQV+M QP GFV S P+ V KL KALYG+KQ+P AWF
Subjt: DRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWF
Query: SKLISCLLEWGFLASKADASMFIFKSGS
+KL S L++WGF S+AD SMF++ + S
Subjt: SKLISCLLEWGFLASKADASMFIFKSGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438FWJ3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-112 | 43.51 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L SK +S+F++FK ++E QF ++I+ L++D+G EFK SS LA++GI + S PY P+QNG ERK RH++E
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
L+G++ +Y + K+FGC C+P++R YN NKL +RS +CVFLGYSS+ KGY+CL+ +GRLYV+RHVVF+E F FQS P
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
Query: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
V + P + L C SSP +S S T P+ PP P S+ S P L+ +P
Subjt: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
Query: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
+ HP+ N HPMVTR+K + K K + + EP + +A++DSNW AM+ E+ AL RN TW LVP P++ ++GCKWV+++K KPDG++DR
Subjt: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
Query: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
YKARLVAQG+TQ LG+DYF+TFSPVVK +TIRI+L++A+SF W + QLDV NAFLHG+L E V+M+QP GF+++ +PSHV KL+KALYG+KQ+PRAW++K
Subjt: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
Query: LISCLLEWGFLASKADASMFIFKS
L + LL WGF AS+AD+SMFI S
Subjt: LISCLLEWGFLASKADASMFIFKS
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| A0A438JAU4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-112 | 43.51 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L SK +S+F++FK ++E QF ++I+ L++D+G EFK SS LA++GI + S PY P+QNG ERK RH++E
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
L+G++ +Y + K+FGC C+P++R YN NKL +RS +CVFLGYSS+ KGY+CL+ +GRLYV+RHVVF+E F FQS P
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
Query: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
V + P + L C SSP +S S T P+ PP P S+ S P L+ +P
Subjt: FVKSSFLDPSYPLGSLLHCVNKFSSPLISP--SITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQP
Query: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
+ HP+ N HPMVTR+K + K K + + EP + +A++DSNW AM+ E+ AL RN TW LVP P++ ++GCKWV+++K KPDG++DR
Subjt: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
Query: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
YKARLVAQG+TQ LG+DYF+TFSPVVK +TIRI+L++A+SF W + QLDV NAFLHG+L E V+M+QP GF+++ +PSHV KL+KALYG+KQ+PRAW++K
Subjt: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
Query: LISCLLEWGFLASKADASMFIFKS
L + LL WGF AS+AD+SMFI S
Subjt: LISCLLEWGFLASKADASMFIFKS
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| A0A438JZY3 Retrovirus-related Pol polyprotein from transposon RE1 | 6.2e-113 | 45.64 | Show/hide |
Query: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
LL SK +S FL+FKVMIETQF TK+R LQTD G EF+ ++ L GILHR+SYP QQNG VERK+RHVVE
Subjt: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
Query: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
LY +YS L+++GC+C+PFLR +N +K +RS +C F+GY+S KGYLCL++ +G++++SRHV+F EL D
Subjt: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
Query: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
PF K S + + S HC + PL SP ITP + LP +++P S+ +PIS T S S SS P PT
Subjt: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
Query: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPV---TCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSI
PS+ S HPM TR+K +FKPK +L + CEP ++KEA++ W+ AM E+EAL+ NKTW LVP P ++ ++GC+WV+++K KPDG++
Subjt: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPV---TCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSI
Query: DRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWF
+RYKARLVA+G+ Q G DYF+TFSPVVKP TIR+VLSLA+S W IRQLDVHNAFL+G+L EQV+M QP GFV S P+ V KL KALYG+KQ+P AWF
Subjt: DRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWF
Query: SKLISCLLEWGFLASKADASMFIFKSGS
+KL S L++WGF S+AD SMF++ + S
Subjt: SKLISCLLEWGFLASKADASMFIFKSGS
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| A5AQ04 Integrase catalytic domain-containing protein | 4.0e-112 | 45.52 | Show/hide |
Query: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
LL +K V S F++FK ++E QF+T I+ LQT+ G EF L L+ +GILHR S PY P+QNG VERK RHVVE
Subjt: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE-------------------------
Query: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
LY DY K+FGC C+P L+ N+NK Q RS C+FLGY+ S KGYLCL+ + R+Y+SRHVVF E +F FQ+L
Subjt: ------------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDL
Query: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
S P H P PLPP+ P +++ ++T + +P S + SS+S PP + E+ P
Subjt: PFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPV
Query: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRY
+ + + I HPM+TRSK+ + K K +L + +T EP+ K+ALQD NWK AM+ EY+AL++N+TWSLVP P++ K++GCKWVF++K KP+GSIDRY
Subjt: DNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRY
Query: KARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKL
KARLVAQG+ Q GID+F+TFSPVVKP TIR+VLS+AVS W I+QLDVHNAFL+G+L EQV+M QP GF S P+HV +L KALYG+KQ+PRAWF KL
Subjt: KARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKL
Query: ISCLLEWGFLASKADASMFIFKSGS
S LL+ GF S+ADAS+F F S S
Subjt: ISCLLEWGFLASKADASMFIFKSGS
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| A5AYB0 Integrase catalytic domain-containing protein | 4.6e-108 | 42.97 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L +K + F+ F+ M+E Q +T I+ +Q+D+G EF L ++GILH+ S P+ PQQNG ERK RH+VE
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
L+ + +Y L++FGC CFP LR Y +KL +RS CVFLGY+ + KGYLCLD+ + R+Y+SR+V+F+E SF FQS
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPSTDLP
Query: FVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPP--PTPALVLSESLPNQP
SS PS P SP + PS TP + P +AP A ++PI +S S PP P P S + P+ P
Subjt: FVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPP--PTPALVLSESLPNQP
Query: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
P +N HPMVTR+K+ + K ++++V T EP+ Y +A ++ +W AM++EY+AL+RN TWSLVP P+ +VGC+W++++K +PDGSIDR
Subjt: VDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDR
Query: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
+KARLVAQG+TQ GIDYF TFSPVVKP TIR++L+LAVSF W +RQLDV NAFL+G+L E+V+M QP GFV+ ++P++V KLHKALYG+KQ+PRAWF K
Subjt: YKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSK
Query: LISCLLEWGFLASKADASMFIFKSGS
L LL++GF +S+AD S+FIF + +
Subjt: LISCLLEWGFLASKADASMFIFKSGS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.2e-34 | 40.34 | Show/hide |
Query: SNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDV
S+W+ A++ E A N TW++ P ++ +V +WVF VK G+ RYKARLVA+G+TQ IDY +TF+PV + ++ R +LSL + + ++ Q+DV
Subjt: SNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDV
Query: HNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKLISCLLEWGFLASKADASMFIFKSGS
AFL+G L E++YM+ P G S +V KL+KA+YG+KQ+ R WF L E F+ S D ++I G+
Subjt: HNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKLISCLLEWGFLASKADASMFIFKSGS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-48 | 28.41 | Show/hide |
Query: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEF--KPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------LYGRA----
+L++K V +F +F ++E + K++ L++D+G E+ + +S+GI H + P PQ NG ER NR +VE +G A
Subjt: LLQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEF--KPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------LYGRA----
Query: -------------------------LDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPST
+ YS LK+FGC F + KL +S C+F+GY + GY D ++ SR VVF E + +
Subjt: -------------------------LDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSLPST
Query: DLPFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLP-N
D+ S + I P V +P T S++ + + S+ +S P V+ + +
Subjt: DLPFVKSSFLDPSYPLGSLLHCVNKFSSPLISPSITPPAVPLPPTAAPIPHASAAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLP-N
Query: QPVDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTC---EPKNYKEAL---QDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKL
+ V+ + H + RS+ + + + T+ + EP++ KE L + + AM E E+L +N T+ LV LP ++ + CKWVF++K
Subjt: QPVDNPSNHPSSINVHPMVTRSKTSVFKPKAWLVTKAPVTC---EPKNYKEAL---QDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKL
Query: KPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQ
D + RYKARLV +G+ Q GID+ + FSPVVK +IR +LSLA S ++ QLDV AFLHG+L E++YM+QP GF V KL+K+LYG+KQ
Subjt: KPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQ
Query: SPRAWFSKLISCLLEWGFLASKADASMF
+PR W+ K S + +L + +D ++
Subjt: SPRAWFSKLISCLLEWGFLASKADASMF
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 6.5e-27 | 50.4 | Show/hide |
Query: MVTRSKTSVFK--PKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQA
M+TRSK + K PK L + EPK+ AL+D W AM E +AL RNKTW LVP P ++ ++GCKWVF+ KL DG++DR KARLVA+G+ Q
Subjt: MVTRSKTSVFK--PKAWLVTKAPVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDRKVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQA
Query: LGIDYFKTFSPVVKPATIRIVLSLA
GI + +T+SPVV+ ATIR +L++A
Subjt: LGIDYFKTFSPVVKPATIRIVLSLA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.3e-87 | 36.32 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L+ K V F+ FK ++E +F+T+I +D+G EF L + +GI H S P+ P+ NG ERK+RH+VE
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSL------
L+G + +Y L++FGC+C+P+LR YN +KL +S++CVFLGYS +Q YLCL + + RLY+SRHV F+E F F +
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQSL------
Query: -------------PSTDLP---------------FVKSSFLDPSYPLGSLLHCVNKFSSPLIS--PSITPPAVPL----PPTAAPI-----PHAS-----
P T LP + PS P + + S S PS P P PT P H+S
Subjt: -------------PSTDLP---------------FVKSSFLDPSYPLGSLLHCVNKFSSPLIS--PSITPPAVPL----PPTAAPI-----PHAS-----
Query: -----AAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPVDNPSNHPSSINVHPMVTRSKTSVFK--PKAWLVTKAPVTCEPKNYK
+P ++ + SSSSS S ++ +S S PTP +L P +N+ + +N H M TR+K + K PK L EP+
Subjt: -----AAPIPISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPVDNPSNHPSSINVHPMVTRSKTSVFK--PKAWLVTKAPVTCEPKNYK
Query: EALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDR-KVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQ
+AL+D W+ AM +E A I N TW LVP P +VGC+W+F K DGS++RYKARLVA+GY Q G+DY +TFSPV+K +IRIVL +AV W
Subjt: EALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDR-KVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRIVLSLAVSFGWQ
Query: IRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKLISCLLEWGFLASKADASMFIFKSG
IRQLDV+NAFL G L + VYM QP GF+ P++V KL KALYG+KQ+PRAW+ +L + LL GF+ S +D S+F+ + G
Subjt: IRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKLISCLLEWGFLASKADASMFIFKSG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.6e-89 | 37.33 | Show/hide |
Query: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
L+ K V F+ FK ++E +F+T+I L +D+G EF L L+ +GI H S P+ P+ NG ERK+RH+VE
Subjt: LQSKQDVVSIFLRFKVMIETQFKTKIRALQTDSGTEFKPLSSILASNGILHRISYPYAPQQNGSVERKNRHVVE--------------------------
Query: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQ--------
L+G+ +Y LK+FGC+C+P+LR YN +KL+ +SK+C F+GYS +Q YLCL I +GRLY SRHV F+E F F
Subjt: -----------------LYGRALDYSLLKMFGCSCFPFLRTYNANKLQFRSKECVFLGYSSSQKGYLCLDIHSGRLYVSRHVVFNELSFLFQ--------
Query: ----------------SLPSTDL---------PFVKSSFLDPSYP---LGSLLHCVNKFSSPLISPSITPPAVPL----PPTAAPIP---HASAAPI---
+LP+T L P + +S PS P + + N SS + SPS + P P PTA P S +PI
Subjt: ----------------SLPSTDL---------PFVKSSFLDPSYP---LGSLLHCVNKFSSPLISPSITPPAVPL----PPTAAPIP---HASAAPI---
Query: --------------------PISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPVDNPSNHPSSINVHPMVTRSKTSVFKP--KAWLVTK
PIS+ + +P +S S + S SS S PP P LP P+ N + +N H M TR+K + KP K T
Subjt: --------------------PISTTYDGSPCSSSSSGSFSSFSSISHPPPTPALVLSESLPNQPVDNPSNHPSSINVHPMVTRSKTSVFKP--KAWLVTK
Query: APVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDR-KVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRI
EP+ +A++D W+ AM +E A I N TW LVP P +VGC+W+F K DGS++RYKARLVA+GY Q G+DY +TFSPV+K +IRI
Subjt: APVTCEPKNYKEALQDSNWKAAMDNEYEALIRNKTWSLVPLPNDR-KVVGCKWVFRVKLKPDGSIDRYKARLVAQGYTQALGIDYFKTFSPVVKPATIRI
Query: VLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKLISCLLEWGFLASKADASMFIFKSG
VL +AV W IRQLDV+NAFL G L ++VYM QP GFV P +V +L KA+YG+KQ+PRAW+ +L + LL GF+ S +D S+F+ + G
Subjt: VLSLAVSFGWQIRQLDVHNAFLHGELLEQVYMKQPTGFVSTSHPSHVLKLHKALYGIKQSPRAWFSKLISCLLEWGFLASKADASMFIFKSG
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