| GenBank top hits | e value | %identity | Alignment |
|---|
| AHM88912.1 RNA polymerase beta [Lagenaria siceraria] | 4.4e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| AHM88970.1 RNA polymerase beta [Lagenaria siceraria] | 4.4e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| AHM91152.1 RNA polymerase beta, partial [Lagenaria siceraria] | 4.4e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| ASY96794.1 RNA polymerase beta' subunit [Cucumis melo var. momordica] | 4.4e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| YP_009560826.1 RpoC1 [Trichosanthes kirilowii] | 4.4e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1P8LE65 DNA-directed RNA polymerase subunit gamma | 2.1e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| A0A1X9Q1T5 DNA-directed RNA polymerase subunit beta' | 2.1e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| A0A218KG20 DNA-directed RNA polymerase subunit beta' | 2.1e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| A0A249RZJ2 DNA-directed RNA polymerase subunit beta' | 2.1e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| A0A6M3S6B8 DNA-directed RNA polymerase subunit beta' | 2.1e-126 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A0A326 DNA-directed RNA polymerase subunit beta' | 5.9e-126 | 96.09 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAK+KIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLC
AIGDPISVPTQDML+GLYVLTSGNRR +C
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLC
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| A6MM27 DNA-directed RNA polymerase subunit beta' | 3.1e-127 | 96.98 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
AIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| P11705 DNA-directed RNA polymerase subunit beta' | 3.5e-126 | 95.69 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAK KIREKEPIVW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
AIGDPISVPTQDMLIGLY+LTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| Q4VZP2 DNA-directed RNA polymerase subunit beta' | 5.7e-129 | 98.28 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
SAIGDPISVPTQDMLIGLYVLTSGNRR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| Q8S8Y0 DNA-directed RNA polymerase subunit beta' | 1.6e-126 | 96.96 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ EARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLC
AIGDPISVPTQDMLIGLYVLTSGNRR +C
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLC
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT5G60040.1 nuclear RNA polymerase C1 | 1.3e-22 | 31.73 | Show/hide |
Query: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
++GK GRFR L GKRV+++GR+VI P+L + G+P +A IE + + G + A N +G + +I ++
Subjt: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
Query: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
I + + + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD
Subjt: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
Query: LIGLYVLT
L +++T
Subjt: LIGLYVLT
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| AT5G60040.2 nuclear RNA polymerase C1 | 1.3e-22 | 31.73 | Show/hide |
Query: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
++GK GRFR L GKRV+++GR+VI P+L + G+P +A IE + + G + A N +G + +I ++
Subjt: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEP
Query: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
I + + + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD
Subjt: IVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDM
Query: LIGLYVLT
L +++T
Subjt: LIGLYVLT
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| ATCG00020.1 photosystem II reaction center protein A | 2.0e-84 | 100 | Show/hide |
Query: ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Subjt: ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Query: SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF
SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF
Subjt: SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF
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| ATCG00180.1 DNA-directed RNA polymerase family protein | 4.6e-126 | 94.83 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKS+IREK+PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ+FQPILVEGR ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
AIGDPISVPTQDMLIGLYVLTSG RR +C +
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRVLCGS
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| ATCG00270.1 photosystem II reaction center protein D | 1.2e-25 | 38.56 | Show/hide |
Query: ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E +
Subjt: ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Query: SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIW
+ + Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W
Subjt: SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIW
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