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Lag0000975 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000975
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionOrf112b protein
Genome locationchr4:21630954..21632219
RNA-Seq ExpressionLag0000975
SyntenyLag0000975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_064070.1 orf112b gene product [Beta vulgaris subsp. vulgaris]5.9e-0584.85Show/hide
Query:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
        MSIQSLIPVHNFLEYSS CSSLA+ S  WPSFL
Subjt:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
TrEMBL top hitse value%identityAlignment
E6ZE16 Uncharacterized protein orf112b2.9e-0584.85Show/hide
Query:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
        MSIQSLIPVHNFLEYSS CSSLA+ S  WPSFL
Subjt:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
G2XLR4 Uncharacterized protein2.9e-0584.85Show/hide
Query:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
        MSIQSLIPVHNFLEYSS CSSLA+ S  WPSFL
Subjt:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
Q9MF72 Orf112b protein2.9e-0584.85Show/hide
Query:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
        MSIQSLIPVHNFLEYSS CSSLA+ S  WPSFL
Subjt:  MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCCAATCTCTGATTCCAGTCCATAACTTCCTTGAATATAGCTCCTGTTGCTCTTCTCTGGCTAAGATGTCACAACGTTGGCCATCTTTTCTTAAGCCTCAGGC
TGTGTTAAAGCAGGTTGAATGGATCATAGAAGTTGTAAGATCCTCCTTCTCCTCCCGAAGCTTGGGAATCCGTGTCGAGTACATGGAAGAGTCTGATTTCGAAAGAGAGG
TCGTTATTAAGCCTGGTATGCCTCCGCCCTGTGTCCACAATTCCAGACCTTCAATCCTCGATCATCCCCTGGGCTTAGTTCACATGTTCTTGCTTAGTTCGTATTCCGGT
ATGGTATATGTAACGTTGTTGGTTCCAGGTTGCTTAGGACTGTCAGTATCCGTTGAGTCACCTATCATATCAGCAGGGGAAGCAGCTCTTTCAAACGCACCCAAATCTGA
TGAAGGAACTGTGGAATCAGCGGTTTCTTTCATTCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCCAATCTCTGATTCCAGTCCATAACTTCCTTGAATATAGCTCCTGTTGCTCTTCTCTGGCTAAGATGTCACAACGTTGGCCATCTTTTCTTAAGCCTCAGGC
TGTGTTAAAGCAGGTTGAATGGATCATAGAAGTTGTAAGATCCTCCTTCTCCTCCCGAAGCTTGGGAATCCGTGTCGAGTACATGGAAGAGTCTGATTTCGAAAGAGAGG
TCGTTATTAAGCCTGGTATGCCTCCGCCCTGTGTCCACAATTCCAGACCTTCAATCCTCGATCATCCCCTGGGCTTAGTTCACATGTTCTTGCTTAGTTCGTATTCCGGT
ATGGTATATGTAACGTTGTTGGTTCCAGGTTGCTTAGGACTGTCAGTATCCGTTGAGTCACCTATCATATCAGCAGGGGAAGCAGCTCTTTCAAACGCACCCAAATCTGA
TGAAGGAACTGTGGAATCAGCGGTTTCTTTCATTCGCTGA
Protein sequenceShow/hide protein sequence
MSIQSLIPVHNFLEYSSCCSSLAKMSQRWPSFLKPQAVLKQVEWIIEVVRSSFSSRSLGIRVEYMEESDFEREVVIKPGMPPPCVHNSRPSILDHPLGLVHMFLLSSYSG
MVYVTLLVPGCLGLSVSVESPIISAGEAALSNAPKSDEGTVESAVSFIR