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Lag0000979 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000979
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr4:21635528..21635986
RNA-Seq ExpressionLag0000979
SyntenyLag0000979
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7013176.1 unnamed protein product [Microthlaspi erraticum]1.7e-5794.12Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD
        MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDSTQF RFGSSIYDFSFMDVDKI PFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSD
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENQRRSGDSRIGQ
        EMLRGVEN+RRSGDSRIG+
Subjt:  EMLRGVENQRRSGDSRIGQ

KAF7117209.1 hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii]3.7e-7393.2Show/hide
Query:  GGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEMLRG
        G LRGGGLPCGGCQRFESAYLQLVNLADTKLYDST+F RFG SIYD SFMDVDKILPFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSDEMLRG
Subjt:  GGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEMLRG

Query:  VENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        VEN+ RSGDSRIGQPF+LLLNPWA KRQPGELKHLSSQRKRKQKRFP
Subjt:  VENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

KAG5222336.1 Vacuolar protein sorting-associated protein [Salix suchowensis]1.0e-7593.42Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD
        MVESVGG RGGGLPCGGCQRFESAYLQLV+L  TKLYDSTQF RFGSSIYD SFMDVDKILPFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSD
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        EMLRGVEN+RRSGDSRIGQPFKLL NPWAGKRQPGELKHLS+QRKRKQKRFP
Subjt:  EMLRGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

KAG7528872.1 hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica]1.7e-5794.12Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD
        MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDSTQF RFGSSIYDFSFMDVDKI PFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSD
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENQRRSGDSRIGQ
        EMLRGVEN+RRSGDSRIG+
Subjt:  EMLRGVENQRRSGDSRIGQ

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]8.0e-6892.75Show/hide
Query:  SVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEML
        S GGLRGGGLPCGGCQRFESAYLQLVNLADTK+YDSTQF RFGSSIYD SFMDVDKIL FSSTLGWHSLKV GEVQTRKGLRWIPRHPETRKGV SDEML
Subjt:  SVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEML

Query:  RGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        RGVEN+ RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  RGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf683.9e-6892.75Show/hide
Query:  SVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEML
        S GGLRGGGLPCGGCQRFESAYLQLVNLADTK+YDSTQF RFGSSIYD SFMDVDKIL FSSTLGWHSLKV GEVQTRKGLRWIPRHPETRKGV SDEML
Subjt:  SVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEML

Query:  RGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        RGVEN+ RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  RGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

A0A2N9HJU4 Uncharacterized protein ycf681.9e-5995.8Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD
        MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQF RFGSSIYD SFMDVDKILPFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSD
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENQRRSGDSRIGQ
        EMLRGVEN+RRSGDSRIG+
Subjt:  EMLRGVENQRRSGDSRIGQ

A0A2N9HUL9 Uncharacterized protein ycf682.2e-7996.71Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD
        MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQF RFGSSIYD SFMDVDKILPFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSD
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        EMLRGVEN+RRSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  EMLRGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A2N9I678 Uncharacterized protein ycf681.9e-5995.8Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD
        MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQF RFGSSIYD SFMDVDKILPFSSTLGWHSLKV+GEVQTRKGLRWIPRHPETRKGVVSD
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENQRRSGDSRIGQ
        EMLRGVEN+RRSGDSRIG+
Subjt:  EMLRGVENQRRSGDSRIGQ

A0A2P2JY74 Uncharacterized protein ycf681.2e-7492.86Show/hide
Query:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHS--LKVQGEVQTRKGLRWIPRHPETRKGVV
        MVESVGG RGGGLP GGCQRFESAYLQLVNL  TKLYDSTQF RFGSSIYD SFMDVDKILPFSSTLGWHS  LKV+GEVQTRKGLRWIPRHPETRKGVV
Subjt:  MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHS--LKVQGEVQTRKGLRWIPRHPETRKGVV

Query:  SDEMLRGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        SDEMLRGVEN+RRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS+QRKRKQKRFP
Subjt:  SDEMLRGVENQRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATA
TGATAGCACTCAATTTTGCCGATTCGGCAGTTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAG
TTCAGGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATCAGCGT
AGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAA
GCAAAAGCGATTCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATA
TGATAGCACTCAATTTTGCCGATTCGGCAGTTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAG
TTCAGGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATCAGCGT
AGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAA
GCAAAAGCGATTCCCGTAG
Protein sequenceShow/hide protein sequence
MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFCRFGSSIYDFSFMDVDKILPFSSTLGWHSLKVQGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENQR
RSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP