| GenBank top hits | e value | %identity | Alignment |
|---|
| DAB41745.1 TPA_inf: RNA-dependent RNA polymerase [Oxybasis rubra mitovirus 1] | 2.1e-61 | 46.28 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE L FYE PG VFD+LA AF S LPGRLAQ +EGAGKRR+F IGNY KQRLLYP+H WAM VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALF+L+HH++VWLAA R PNR PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVGERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNMERP
VIA+KEVAH Y+ LD L V IS KS+ S GA EFAKQ+WVG NLSP+S KA+L + SV G+ LA KY + + ++LAG GYRV M+ P
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVGERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNMERP
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| DAB41749.1 TPA_inf: RNA-dependent RNA polymerase [Humulus lupulus mitovirus 1] | 4.3e-59 | 44.16 | Show/hide |
Query: NEDLRFYE-SNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD------------------------
N+DL +YE S + F +A A+ +S PGRLAQV+EG GKRRIF IGNY+KQRLL+PVH+WAM+VLS++P+D
Subjt: NEDLRFYE-SNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD------------------------
Query: ---------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLG
GQPLGYYGSWALFALSHHY+VWLAA R P+R PF YALLG
Subjt: ---------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLG
Query: DDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSM-EYSSLIRLAGGGYRVLGNME
DDIVIADK VA Y+ ILD LGV+IS KS++S GALEFAKQ+WV ++NLSP++ KA+LV+RS++GL+ LA KY + S L+R+AG G+RV +++
Subjt: DDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSM-EYSSLIRLAGGGYRVLGNME
Query: RPR-GKRWLRLRVISDR
GK+W RL +++ +
Subjt: RPR-GKRWLRLRVISDR
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| KAG2269810.1 hypothetical protein Bca52824_064365 [Brassica carinata] | 1.8e-57 | 42.99 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE LRFYE+ PG+VFD LA F S P GRLAQ +EGAGKRR+F IGN+ KQRLLYPVH W M VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
VIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S KA+L + ++G LA KY + + +RL GYRVLG M+ +
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
Query: GKRWLRLRVISDRL
+R+ R++ +S +L
Subjt: GKRWLRLRVISDRL
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| YP_004927457.1 orf448 [Brassica oleracea] | 1.8e-57 | 42.99 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE LRFYE+ PG+VFD LA F S P GRLAQ +EGAGKRR+F IGN+ KQRLLYPVH W M VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
VIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S KA+L + ++G LA KY + + +RL GYRVLG M+ +
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
Query: GKRWLRLRVISDRL
+R+ R++ +S +L
Subjt: GKRWLRLRVISDRL
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| YP_004927571.1 orf448 [Brassica carinata] | 1.8e-57 | 42.99 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE LRFYE+ PG+VFD LA F S P GRLAQ +EGAGKRR+F IGN+ KQRLLYPVH W M VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
VIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S KA+L + ++G LA KY + + +RL GYRVLG M+ +
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
Query: GKRWLRLRVISDRL
+R+ R++ +S +L
Subjt: GKRWLRLRVISDRL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z6JHF7 RNA-dependent RNA polymerase | 1.0e-61 | 46.28 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE L FYE PG VFD+LA AF S LPGRLAQ +EGAGKRR+F IGNY KQRLLYP+H WAM VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALF+L+HH++VWLAA R PNR PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVGERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNMERP
VIA+KEVAH Y+ LD L V IS KS+ S GA EFAKQ+WVG NLSP+S KA+L + SV G+ LA KY + + ++LAG GYRV M+ P
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVGERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNMERP
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| A0A2Z6JSM6 RNA-dependent RNA polymerase | 2.1e-59 | 44.16 | Show/hide |
Query: NEDLRFYE-SNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD------------------------
N+DL +YE S + F +A A+ +S PGRLAQV+EG GKRRIF IGNY+KQRLL+PVH+WAM+VLS++P+D
Subjt: NEDLRFYE-SNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD------------------------
Query: ---------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLG
GQPLGYYGSWALFALSHHY+VWLAA R P+R PF YALLG
Subjt: ---------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLG
Query: DDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSM-EYSSLIRLAGGGYRVLGNME
DDIVIADK VA Y+ ILD LGV+IS KS++S GALEFAKQ+WV ++NLSP++ KA+LV+RS++GL+ LA KY + S L+R+AG G+RV +++
Subjt: DDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSM-EYSSLIRLAGGGYRVLGNME
Query: RPR-GKRWLRLRVISDR
GK+W RL +++ +
Subjt: RPR-GKRWLRLRVISDR
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| G4XYD1 Orf448 | 8.8e-58 | 42.99 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE LRFYE+ PG+VFD LA F S P GRLAQ +EGAGKRR+F IGN+ KQRLLYPVH W M VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
VIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S KA+L + ++G LA KY + + +RL GYRVLG M+ +
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
Query: GKRWLRLRVISDRL
+R+ R++ +S +L
Subjt: GKRWLRLRVISDRL
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| G4XYU5 Orf448 | 8.8e-58 | 42.99 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE LRFYE+ PG+VFD LA F S P GRLAQ +EGAGKRR+F IGN+ KQRLLYPVH W M VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
VIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S KA+L + ++G LA KY + + +RL GYRVLG M+ +
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
Query: GKRWLRLRVISDRL
+R+ R++ +S +L
Subjt: GKRWLRLRVISDRL
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| Q6YSM8 ORF448 | 8.8e-58 | 42.99 | Show/hide |
Query: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
NE LRFYE+ PG+VFD LA F S P GRLAQ +EGAGKRR+F IGN+ KQRLLYPVH W M VL ++P D
Subjt: NEDLRFYESNPGIVFDELAQAFQNSHSPPLPGRLAQVIEGAGKRRIFAIGNYVKQRLLYPVHEWAMEVLSKLPSD-------------------------
Query: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDI
Subjt: ------------------------------------------------------GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDI
Query: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
VIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S KA+L + ++G LA KY + + +RL GYRVLG M+ +
Subjt: VIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPISCKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME-RPR
Query: GKRWLRLRVISDRL
+R+ R++ +S +L
Subjt: GKRWLRLRVISDRL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P92543 Uncharacterized mitochondrial protein AtMg01110 | 5.2e-39 | 58.45 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPIS
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDIVIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPIS
Query: CKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME
KA+L + ++G LA KY + + +RL GYRVLG M+
Subjt: CKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME
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| P92567 Uncharacterized mitochondrial protein AtMg01410 | 1.2e-16 | 58.67 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLV
GQPLGY+GSW FALSHH +VW A++ P F++YA+LGDD+VIAD+EVA Y+ L LGV IS QKSL+
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLV
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| P93304 Uncharacterized mitochondrial protein AtMg00490 | 5.8e-06 | 48.08 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACP------NRVKPFSAYALLGDDI
GQPLGYY SW LFALSHH VVW AA P +++ P +A G ++
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACP------NRVKPFSAYALLGDDI
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| Q33339 RNA-directed RNA polymerase | 2.3e-10 | 45.35 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQ
GQP+G Y S+A+ AL+HH +V +AA + F+ Y +LGDDIVIA VA Y +++ LG+SIS+ KS++S EFAK+
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQ
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G07749.1 Mitovirus RNA-dependent RNA polymerase | 3.7e-40 | 58.45 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPIS
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDIVIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPIS
Query: CKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME
KA+L + ++G LA KY + + +RL GYRVLG M+
Subjt: CKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME
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| ATMG00490.1 Mitovirus RNA-dependent RNA polymerase | 4.1e-07 | 48.08 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACP------NRVKPFSAYALLGDDI
GQPLGYY SW LFALSHH VVW AA P +++ P +A G ++
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACP------NRVKPFSAYALLGDDI
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| ATMG01110.1 Mitovirus RNA-dependent RNA polymerase | 3.7e-40 | 58.45 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPIS
GQPLGYYGSWALFALSHH +VWLAA RA P++ +PF YALLGDDIVIAD+ VA Y+ +LDAL V IS KS+VS G LEFAK++WV ++LSP+S
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLVSYLGALEFAKQYWVG--ERNLSPIS
Query: CKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME
KA+L + ++G LA KY + + +RL GYRVLG M+
Subjt: CKALLVTRSVIGLAALASKYSMEYSSLIRLAGGGYRVLGNME
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| ATMG01410.1 open reading frame 204 | 8.8e-18 | 58.67 | Show/hide |
Query: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLV
GQPLGY+GSW FALSHH +VW A++ P F++YA+LGDD+VIAD+EVA Y+ L LGV IS QKSL+
Subjt: GQPLGYYGSWALFALSHHYVVWLAARRACPNRVKPFSAYALLGDDIVIADKEVAHHYQVILDALGVSISAQKSLV
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