| GenBank top hits | e value | %identity | Alignment |
|---|
| CAB4269460.1 unnamed protein product [Prunus armeniaca] | 4.6e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| CAB4274708.1 unnamed protein product [Prunus armeniaca] | 4.6e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| CAB4299884.1 unnamed protein product [Prunus armeniaca] | 4.6e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| CAB4320153.1 unnamed protein product [Prunus armeniaca] | 4.6e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| RVW24661.1 DNA-directed RNA polymerase subunit beta' [Vitis vinifera] | 7.8e-134 | 68.91 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVM+GHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLV KGFNADFDGDQMAVHVPLSLEAQ+EARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANRTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLIDHFG
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR I EFLRE+RSRKGSF DSN LSNPTQRNM VLM ERA+LVFHNKVIDGTA+KRLISRLIDHFG
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANRTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLIDHFG
Query: MAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
MAYTSHILD +KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: MAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CN79 DNA-directed RNA polymerase subunit | 3.8e-134 | 68.91 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVM+GHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLV KGFNADFDGDQMAVHVPLSLEAQ+EARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANRTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLIDHFG
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR I EFLRE+RSRKGSF DSN LSNPTQRNM VLM ERA+LVFHNKVIDGTA+KRLISRLIDHFG
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANRTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLIDHFG
Query: MAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
MAYTSHILD +KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: MAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| A0A6J5TZC9 DNA-directed RNA polymerase subunit | 2.2e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| A0A6J5UKR1 DNA-directed RNA polymerase subunit | 2.2e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| A0A6J5WKL9 DNA-directed RNA polymerase | 2.2e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| A0A6J5Y6V4 DNA-directed RNA polymerase subunit | 2.2e-134 | 69.15 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRRGICAN TI EFL ESRSRKGSF IIDSN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICAN---RTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
HFGMAYTSHILD +KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQSIEIW +T +E +R+++
Subjt: HFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWTSTLVNEEIRRQL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A6MM27 DNA-directed RNA polymerase subunit beta' | 8.0e-65 | 60.09 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| B1NWE1 DNA-directed RNA polymerase subunit beta' | 8.0e-65 | 60.09 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| P11705 DNA-directed RNA polymerase subunit beta' | 1.0e-64 | 59.66 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLY+LTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| Q2L8Z4 DNA-directed RNA polymerase subunit beta' | 2.3e-64 | 59.66 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVM+GHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| Q4VZP2 DNA-directed RNA polymerase subunit beta' | 2.1e-65 | 60.52 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G40030.1 nuclear RNA polymerase D1B | 4.6e-15 | 25 | Show/hide |
Query: KLVQEAVDTLLDNGIRGQPMRDGH------------NKEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
KLV + + G +RDG ++ VM G V +NR PT H+ +QA + + E + ++PL+C +ADFDGD + + P SL
Subjt: KLVQEAVDTLLDNGIRGQPMRDGH------------NKEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Query: AQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLYVL--------TSGNRRGICANRTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNM--EVLMAER
A+AE L LLSS G I D L+ L V+ + + + + ++ P LR+S ++ + L+ P + + + + +
Subjt: AQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLYVL--------TSGNRRGICANRTIGPEFLRESRSRKGSFKIIDSNLLSNPTQRNM--EVLMAER
Query: ADLVFHNKVID--GTAIKRLISRLIDHFGMAYTSHILDVIKTLGFQQATATSISLGIDDL
+DL+ + +D G+ I +++ + G T D ++ L + A SL ++DL
Subjt: ADLVFHNKVID--GTAIKRLISRLIDHFGMAYTSHILDVIKTLGFQQATATSISLGIDDL
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| AT5G60040.1 nuclear RNA polymerase C1 | 3.0e-14 | 36.89 | Show/hide |
Query: NKEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLY
++ + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD L +
Subjt: NKEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLY
Query: VLT
++T
Subjt: VLT
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| AT5G60040.2 nuclear RNA polymerase C1 | 3.0e-14 | 36.89 | Show/hide |
Query: NKEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLY
++ + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD L +
Subjt: NKEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLY
Query: VLT
++T
Subjt: VLT
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 1.6e-52 | 88.03 | Show/hide |
Query: MAERADLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQS
MAERA+LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD +KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQS
Subjt: MAERADLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDVIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQS
Query: IEIWTSTLVNEEIRRQL
IEIW +T +E +R+++
Subjt: IEIWTSTLVNEEIRRQL
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| ATCG00180.1 DNA-directed RNA polymerase family protein | 1.8e-64 | 58.8 | Show/hide |
Query: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
MCQ+KLVQEAVDTLLDNGIRGQPMRDGHNK
Subjt: MCQDKLVQEAVDTLLDNGIRGQPMRDGHNK----------------------------------------------------------------------
Query: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
EVMQGHPVLLNRAPTLHRLGIQ+FQPILVEGR ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Subjt: ---------------------EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
AIGDPISVPTQDMLIGLYVLTSG RRGICANR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
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