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Lag0001017 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001017
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:21740091..21740762
RNA-Seq ExpressionLag0001017
SyntenyLag0001017
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RXI09603.1 hypothetical protein DVH24_034794 [Malus domestica]7.4e-3195.77Show/hide
Query:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        MAV QVCPHRL VQDISLSRRQRGFDFPWGRVLRKEVD GLSISLELILPGSMPERLMGTDCKFVGNMSTL
Subjt:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
THU42232.1 hypothetical protein C4D60_Mb00t02970 [Musa balbisiana]1.1e-1584.62Show/hide
Query:  RRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        + QRGFDFPWG    KEVDHGLSISLE ILPGSMPERLMGTDCKFVG+MSTL
Subjt:  RRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
THU42368.1 hypothetical protein C4D60_Mb00t08350 [Musa balbisiana]1.3e-1973.24Show/hide
Query:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        M VG++CP+RLVVQDISLSRRQRGFDFPWG   R         +LE ILPGSMPERLMGTDCKFVG+MSTL
Subjt:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
THU43611.1 hypothetical protein C4D60_Mb00t10690 [Musa balbisiana]5.5e-1869.01Show/hide
Query:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        M VG++CP+RLVVQDISLSRRQRGFDFPWG                 ILPGSMPERLMGTDCKFVG+MSTL
Subjt:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
XP_021842836.1 uncharacterized protein LOC110782893 [Spinacia oleracea]1.7e-1485.42Show/hide
Query:  MMAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLEL
        MMAVG +CPHRL VQDISLSRRQRGFDFPWGRVL+KEVD  LSISL+L
Subjt:  MMAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLEL
TrEMBL top hitse value%identityAlignment
A0A498KXE4 Uncharacterized protein3.6e-3195.77Show/hide
Query:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        MAV QVCPHRL VQDISLSRRQRGFDFPWGRVLRKEVD GLSISLELILPGSMPERLMGTDCKFVGNMSTL
Subjt:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
A0A4S8I301 Uncharacterized protein6.3e-2073.24Show/hide
Query:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        M VG++CP+RLVVQDISLSRRQRGFDFPWG   R         +LE ILPGSMPERLMGTDCKFVG+MSTL
Subjt:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
A0A4S8I5K5 Uncharacterized protein5.6e-1684.62Show/hide
Query:  RRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        + QRGFDFPWG    KEVDHGLSISLE ILPGSMPERLMGTDCKFVG+MSTL
Subjt:  RRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
A0A4S8I5L6 Uncharacterized protein4.4e-1384Show/hide
Query:  GFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTLFN
        G   P G VLRKEVDHGLSISLE ILPGSMPERLMGTDCKFVG+MSTL N
Subjt:  GFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTLFN
A0A4S8I727 Uncharacterized protein2.7e-1869.01Show/hide
Query:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
        M VG++CP+RLVVQDISLSRRQRGFDFPWG                 ILPGSMPERLMGTDCKFVG+MSTL
Subjt:  MAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20362.1 unknown protein1.4e-1193.55Show/hide
Query:  MMAVGQVCPHRLVVQDISLSRRQRGFDFPWG
        MMAV QVCPHRLVVQDISLSRRQ+GFDFPWG
Subjt:  MMAVGQVCPHRLVVQDISLSRRQRGFDFPWG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCAGTCGGGCAAGTATGCCCCCATCGTCTAGTGGTTCAGGACATCTCTCTTTCAAGGAGGCAGCGGGGATTCGACTTCCCCTGGGGTAGGGTACTACGAAAGGA
AGTTGATCATGGATTATCAATAAGCTTGGAATTGATTCTTCCCGGGTCGATGCCCGAGCGGTTAATGGGGACGGACTGTAAATTCGTTGGCAATATGTCTACGCTGTTCA
ATTGGTCAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAGCCCCGTCAGTCCCGATGGATCCAAATCCAATAAAAAATACATCAATTCATCTCTTCCTTTCCTG
TGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCAGTCGGGCAAGTATGCCCCCATCGTCTAGTGGTTCAGGACATCTCTCTTTCAAGGAGGCAGCGGGGATTCGACTTCCCCTGGGGTAGGGTACTACGAAAGGA
AGTTGATCATGGATTATCAATAAGCTTGGAATTGATTCTTCCCGGGTCGATGCCCGAGCGGTTAATGGGGACGGACTGTAAATTCGTTGGCAATATGTCTACGCTGTTCA
ATTGGTCAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAGCCCCGTCAGTCCCGATGGATCCAAATCCAATAAAAAATACATCAATTCATCTCTTCCTTTCCTG
TGA
Protein sequenceShow/hide protein sequence
MMAVGQVCPHRLVVQDISLSRRQRGFDFPWGRVLRKEVDHGLSISLELILPGSMPERLMGTDCKFVGNMSTLFNWSEHRPVKAEAAGSSPVSPDGSKSNKKYINSSLPFL