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Lag0001036 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001036
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase, eukaryota
Genome locationchr4:22501547..22501894
RNA-Seq ExpressionLag0001036
SyntenyLag0001036
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4078111.1 unnamed protein product [Lactuca saligna]4.4e-1847.42Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGLS+N RK+ + G+ +  QEVE W    GC    LP  +LG  +G N +RKS WN++I+N + KL  WKS SLS GGR+ LA+ VL N+P +  S+
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

EOY02885.1 Uncharacterized protein TCM_017287 [Theobroma cacao]1.3e-1746.39Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGL +N  K+SL G++ME + +E+W +  GC R+ LP +YLG  LG NH  +  W  VI  ++ +L GW+S  L  GG+ITL +SVL+N+P Y  SI
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

PRQ36601.1 putative RNA-directed DNA polymerase [Rosa chinensis]1.3e-1745.36Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGL +NK K S++G+N E   +E+  D  GC     P+ YLG  LGGN  + S+WN V++ ++  LEGWK   LS+GGR+TL Q+VL+++P Y  S+
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

XP_015950345.1 uncharacterized protein LOC107475226 [Arachis duranensis]8.3e-1743.3Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        +G+ +N RK+++IGLN +++ V+   D  GCS+ +LPI YLG  LG N  R   W  VI+ ++ +L GWK   LSK G++ L ++V+NN+P+Y  SI
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

XP_039060736.1 uncharacterized protein LOC120204786 [Hibiscus syriacus]6.4e-1745.36Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGL LN RK  L G+N+  ++V +WT+  GCS    P  YLG  LG + +  + WN VI N   KL GWK+ SLS  GR+ L +SVL ++P+Y  S+
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

TrEMBL top hitse value%identityAlignment
A0A061ED22 Uncharacterized protein6.2e-1846.39Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGL +N  K+SL G++ME + +E+W +  GC R+ LP +YLG  LG NH  +  W  VI  ++ +L GW+S  L  GG+ITL +SVL+N+P Y  SI
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

A0A2P6QQZ3 Putative RNA-directed DNA polymerase6.2e-1845.36Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGL +NK K S++G+N E   +E+  D  GC     P+ YLG  LGGN  + S+WN V++ ++  LEGWK   LS+GGR+TL Q+VL+++P Y  S+
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

A0A6A2XXQ6 Kinase-related family protein4.0e-1745.36Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGL LN +K+ L G+N+ QQEV+ W D  GC   + P NYLG  LG   +    W  V+ N  +KL GWK+ +LS  GR+ L +SVL+++P Y  SI
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

A0A6P4CG65 uncharacterized protein LOC1074752264.0e-1743.3Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        +G+ +N RK+++IGLN +++ V+   D  GCS+ +LPI YLG  LG N  R   W  VI+ ++ +L GWK   LSK G++ L ++V+NN+P+Y  SI
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

A0A6S7L5W5 Reverse transcriptase domain-containing protein2.1e-1847.42Show/hide
Query:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI
        SGLS+N RK+ + G+ +  QEVE W    GC    LP  +LG  +G N +RKS WN++I+N + KL  WKS SLS GGR+ LA+ VL N+P +  S+
Subjt:  SGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGTCGGGGCTCTCTCTAAACAAAAGGAAAACTTCCTTGATAGGCCTAAATATGGAGCAGCAGGAAGTTGAGAAATGGACTGACAAATTTGGCTGTAGCAGAGA
AGATCTCCCCATTAATTACCTCGGTTTTAGGCTGGGAGGTAATCACCATAGGAAATCCTACTGGAATATGGTTATTGACAACCTAAAGGCCAAATTGGAAGGTTGGAAAA
GCATCTCGTTATCGAAAGGTGGCAGAATCACGCTTGCACAATCGGTCTTAAATAACATCCCCTTGTATCAATTCTCTATTCTGTATTTTCAAAAAAAAAAAAAAAATTTC
TATTCTGAAAGCGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGTCGGGGCTCTCTCTAAACAAAAGGAAAACTTCCTTGATAGGCCTAAATATGGAGCAGCAGGAAGTTGAGAAATGGACTGACAAATTTGGCTGTAGCAGAGA
AGATCTCCCCATTAATTACCTCGGTTTTAGGCTGGGAGGTAATCACCATAGGAAATCCTACTGGAATATGGTTATTGACAACCTAAAGGCCAAATTGGAAGGTTGGAAAA
GCATCTCGTTATCGAAAGGTGGCAGAATCACGCTTGCACAATCGGTCTTAAATAACATCCCCTTGTATCAATTCTCTATTCTGTATTTTCAAAAAAAAAAAAAAAATTTC
TATTCTGAAAGCGCCTAA
Protein sequenceShow/hide protein sequence
MEGSGLSLNKRKTSLIGLNMEQQEVEKWTDKFGCSREDLPINYLGFRLGGNHHRKSYWNMVIDNLKAKLEGWKSISLSKGGRITLAQSVLNNIPLYQFSILYFQKKKKNF
YSESA