; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001042 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001042
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr4:22758838..22760062
RNA-Seq ExpressionLag0001042
SyntenyLag0001042
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802238.1 uncharacterized protein G2W53_041349 [Senna tora]3.5e-1931.73Show/hide
Query:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITV--------------------------ALPQQ
        +DA+AGGAL++K  + AY +LE +S+ + QW + R    +V  V + D  +++ + IA L    K++ +                           L  +
Subjt:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITV--------------------------ALPQQ

Query:  NKQALPQQNSGN-SLESMMKDYMARNDVIIQSQQASLT--------VLEFQNPTLCTAPPYDPPLPF--PQRQESKNQD---GSPFLATGRSLMDVQQGE
        + QALP       SLE MM  YM++ND ++QSQ A           ++E     L        P+ F     +E KN     G PFLATGR+++DVQ+GE
Subjt:  NKQALPQQNSGN-SLESMMKDYMARNDVIIQSQQASLT--------VLEFQNPTLCTAPPYDPPLPF--PQRQESKNQD---GSPFLATGRSLMDVQQGE

Query:  FTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQVLDEIAEDHFEKELMEYH
         T RV DQ+VKF++F AMK P + E+C  + V++ + +   + + ++YH
Subjt:  FTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQVLDEIAEDHFEKELMEYH

KAF7814045.1 uncharacterized protein G2W53_028014 [Senna tora]1.2e-1933.48Show/hide
Query:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITV--------ALPQQNKQALPQQNSGNSLESMM
        +DA+A GAL++K  + AY +LE +S+ + QW + R    +V  V + D  +++ + IA L    K++ +           Q ++   P      SLE MM
Subjt:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITV--------ALPQQNKQALPQQNSGNSLESMM

Query:  KDYMARNDVIIQSQQASLT--------VLEFQNPTLCTAPPYDPPLPF--PQRQESKNQD---GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMK
          YM++ND ++QSQ A           ++E     L        P  F     +E KN     G PFLATGR+++DVQ+GE T RV DQ+VKF++F AMK
Subjt:  KDYMARNDVIIQSQQASLT--------VLEFQNPTLCTAPPYDPPLPF--PQRQESKNQD---GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMK

Query:  YPNDFEDCSFIQVLDEIAEDHFEKELMEYH
         P + E+C  + V+D   +D    + ++YH
Subjt:  YPNDFEDCSFIQVLDEIAEDHFEKELMEYH

KAF7814830.1 uncharacterized protein G2W53_028799 [Senna tora]2.2e-1832.51Show/hide
Query:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITVALPQQNKQALPQQNSGNSLESMMKDYMARND
        +DA+AGGAL++K  + AY +LE + + + QW + R    +V  V + D  +++ + I  L    K++  ALP       P      SLE MM  YM++N 
Subjt:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITVALPQQNKQALPQQNSGNSLESMMKDYMARND

Query:  VIIQSQQASLTVLEFQ----NPTLCTAPPYDPPLPFPQRQESKNQD-----GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQ
         ++QSQ A+   + +        L     +  P  F      ++++     G PFLATGR+++DVQ+GE   RV D++V F++F AMK P++ E+C  + 
Subjt:  VIIQSQQASLTVLEFQ----NPTLCTAPPYDPPLPFPQRQESKNQD-----GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQ

Query:  VLD
        V++
Subjt:  VLD

KAF7837570.1 uncharacterized protein G2W53_006052 [Senna tora]4.4e-2233.48Show/hide
Query:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITV--------ALPQQNKQALPQQNSGNSLESMM
        +DA+AGGAL++K  + AY +LE +S+ + QW + R    +V  V + D  +++ + IA L    K++ +           Q ++   P     +SLE MM
Subjt:  VDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITV--------ALPQQNKQALPQQNSGNSLESMM

Query:  KDYMARNDVIIQSQQASLT--------VLEFQNPTLCTAPPYDPPLPF--PQRQESKNQD---GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMK
          YM++ND ++QSQ A           ++E     L        P  F     +E KN     G PFLATGR+++DVQ+GE T RV DQ+VKF++F AMK
Subjt:  KDYMARNDVIIQSQQASLT--------VLEFQNPTLCTAPPYDPPLPF--PQRQESKNQD---GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMK

Query:  YPNDFEDCSFIQVLDEIAEDHFEKELMEYH
         P + E+C  + V+D + +   + + ++YH
Subjt:  YPNDFEDCSFIQVLDEIAEDHFEKELMEYH

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]3.5e-1936.45Show/hide
Query:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRADIAELANTFKNI--------TVALPQQNKQALP----------
        ++DASA GA+L+K++NEA+EILE I++ + QWSN R  +S+KV  V+EVD ++ + A +A + N   N+        +   P Q +QA P          
Subjt:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRADIAELANTFKNI--------TVALPQQNKQALP----------

Query:  ---QQNSGNSLESMMKDYMARNDVIIQSQQASLTVLEFQNPTLCTAPPYDPPLPFPQRQESKNQDG-----SPFLATGRSLMDVQQ-----GEFTTRVHD
           Q    +SLES+M+DYMA+ND +IQSQ ASL  LE Q   L       P    P   E+  +DG     S  L +G+ L + ++     GE T+  +D
Subjt:  ---QQNSGNSLESMMKDYMARNDVIIQSQQASLTVLEFQNPTLCTAPPYDPPLPFPQRQESKNQDG-----SPFLATGRSLMDVQQ-----GEFTTRVHD

Query:  QKV
        +K+
Subjt:  QKV

TrEMBL top hitse value%identityAlignment
A0A6J1CR66 uncharacterized protein LOC1110134313.2e-1036.84Show/hide
Query:  PQQNSGNSLESMMKDYMARNDVIIQSQQASLTVLEFQNPTLCTAPPYDPPLPFPQRQESKNQDGSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMK
        P    G+ ++ ++ D+ A  + +  S    L + E + PT+ T    D  +  P   E K +D   FL+T R L+DV QGE T RV DQ++KF ++D+MK
Subjt:  PQQNSGNSLESMMKDYMARNDVIIQSQQASLTVLEFQNPTLCTAPPYDPPLPFPQRQESKNQDGSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMK

Query:  YPNDFEDCSFIQVLDEIAEDHFEKELMEYHTKN
        YP+D E+C+F++VLDE        E+M  H  N
Subjt:  YPNDFEDCSFIQVLDEIAEDHFEKELMEYHTKN

A0A6J1EEI2 uncharacterized protein LOC1114333941.7e-1128.95Show/hide
Query:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNI-------------TVALPQQ-----------
        +VDASA GA+L+KT+NEAYEILERI++ +CQW++VR +  +K + V+EVD +S+I A +A + N  +N+             TVA+  Q           
Subjt:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNI-------------TVALPQQ-----------

Query:  -----------------------------------------------------NKQALPQQN-------------------------------SGNSLES
                                                             N+Q  P+ N                                G S+ES
Subjt:  -----------------------------------------------------NKQALPQQN-------------------------------SGNSLES

Query:  MMKDYMARNDVIIQSQQASLTVLEFQNP
        ++K+YMA+NDV+IQ+QQASL  LE Q P
Subjt:  MMKDYMARNDVIIQSQQASLTVLEFQNP

A0A6J1EQ90 uncharacterized protein LOC1114364112.9e-1150.7Show/hide
Query:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNITV
        +VDASA GA+L+KT+NEAYEILERI++ +CQW++VR +  +K + V+EVD +S+I A +A + N  +N+ +
Subjt:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNITV

A0A6J1EQ90 uncharacterized protein LOC1114364112.2e-0349.02Show/hide
Query:  GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQVL
        G PFL  GR+L+DV +G  T R+  QKV+F++ D+MKYP   E+CS +  L
Subjt:  GSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQVL

A0A6J1EQ90 uncharacterized protein LOC1114364111.4e-1052.17Show/hide
Query:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNI
        +VDASA G +L+KT+NEAYEILERI++ +CQW +VR +  KK + V+EVD +S+I A +A + N  +N+
Subjt:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNI

A0A6J1H7E4 uncharacterized protein LOC1114611681.7e-1153.62Show/hide
Query:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNI
        +VDASA GA+L+KT+NEAYEILERI++ +CQW++VR +  KK + V+EVD +S+I A +A + N  +N+
Subjt:  MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRADIAELANTFKNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCTTCTGCGGGAGGGGCTCTTTTGGCAAAAACTTTTAATGAAGCTTATGAGATTTTAGAGAGAATATCAACCTACAGTTGTCAATGGTCAAATGTTAGAGG
CTCTAGTAAGAAAGTTAAGAGTGTGATAGAAGTTGATGGTGTGTCTACCATCAGGGCCGATATTGCAGAATTAGCTAACACTTTTAAAAACATAACTGTGGCATTGCCCC
AGCAAAATAAGCAGGCTTTGCCTCAGCAAAATTCGGGTAATTCTCTGGAGTCAATGATGAAGGATTATATGGCTCGTAATGATGTCATAATCCAAAGTCAGCAGGCTTCA
TTGACAGTCCTAGAGTTTCAGAACCCCACCTTATGTACCGCCCCACCCTATGACCCACCCTTACCTTTTCCACAAAGGCAAGAGTCTAAGAACCAAGATGGTAGTCCATT
TTTAGCAACTGGTAGATCACTGATGGATGTCCAACAAGGGGAGTTTACAACGAGGGTGCATGACCAAAAGGTGAAGTTTCATATGTTTGATGCAATGAAATATCCTAATG
ATTTTGAGGATTGCTCGTTCATTCAGGTGTTGGATGAGATTGCTGAGGACCACTTTGAGAAGGAATTGATGGAATACCATACCAAAAATTTGGAGAAATCCAAATTGAGG
ATTTGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCTTCTGCGGGAGGGGCTCTTTTGGCAAAAACTTTTAATGAAGCTTATGAGATTTTAGAGAGAATATCAACCTACAGTTGTCAATGGTCAAATGTTAGAGG
CTCTAGTAAGAAAGTTAAGAGTGTGATAGAAGTTGATGGTGTGTCTACCATCAGGGCCGATATTGCAGAATTAGCTAACACTTTTAAAAACATAACTGTGGCATTGCCCC
AGCAAAATAAGCAGGCTTTGCCTCAGCAAAATTCGGGTAATTCTCTGGAGTCAATGATGAAGGATTATATGGCTCGTAATGATGTCATAATCCAAAGTCAGCAGGCTTCA
TTGACAGTCCTAGAGTTTCAGAACCCCACCTTATGTACCGCCCCACCCTATGACCCACCCTTACCTTTTCCACAAAGGCAAGAGTCTAAGAACCAAGATGGTAGTCCATT
TTTAGCAACTGGTAGATCACTGATGGATGTCCAACAAGGGGAGTTTACAACGAGGGTGCATGACCAAAAGGTGAAGTTTCATATGTTTGATGCAATGAAATATCCTAATG
ATTTTGAGGATTGCTCGTTCATTCAGGTGTTGGATGAGATTGCTGAGGACCACTTTGAGAAGGAATTGATGGAATACCATACCAAAAATTTGGAGAAATCCAAATTGAGG
ATTTGGAAATAG
Protein sequenceShow/hide protein sequence
MVDASAGGALLAKTFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRADIAELANTFKNITVALPQQNKQALPQQNSGNSLESMMKDYMARNDVIIQSQQAS
LTVLEFQNPTLCTAPPYDPPLPFPQRQESKNQDGSPFLATGRSLMDVQQGEFTTRVHDQKVKFHMFDAMKYPNDFEDCSFIQVLDEIAEDHFEKELMEYHTKNLEKSKLR
IWK