; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001052 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001052
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpentatricopeptide repeat-containing protein At3g62470, mitochondrial-like
Genome locationchr4:23070579..23078155
RNA-Seq ExpressionLag0001052
SyntenyLag0001052
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT92874.1 hypothetical protein VIGAN_07173000 [Vigna angularis var. angularis]4.0e-0764Show/hide
Query:  QSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC
        +S+CA+LVVALCPCL+C +L+L+ + I+L+VKFH FCHTPLH L  KK C
Subjt:  QSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC
KAG7021046.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-0469.23Show/hide
Query:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
        LSLT RR SNFSAF  TIS+  C+IRRSLGREG+SF+ +
Subjt:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
XP_022937612.1 pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita moschata]7.1e-0469.23Show/hide
Query:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
        LSLT RR SNFSAF  TIS+  C+IRRSLGREG+SF+ +
Subjt:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
XP_022965638.1 pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita maxima]5.5e-0469.23Show/hide
Query:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
        LSLT RR SNFSAF ATIS+  C+I+RSLGREG+SF+ +
Subjt:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
XP_028186596.1 pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Glycine soja]3.1e-0764Show/hide
Query:  QSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC
        +S+CA+LVVALCPCL+C +L+L+ + I+L+VKFH FCHTPLH L  KK+C
Subjt:  QSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC
TrEMBL top hitse value%identityAlignment
A0A0S3SJ30 Uncharacterized protein2.0e-0764Show/hide
Query:  QSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC
        +S+CA+LVVALCPCL+C +L+L+ + I+L+VKFH FCHTPLH L  KK C
Subjt:  QSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC
A0A6J1FBQ0 pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like3.4e-0469.23Show/hide
Query:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
        LSLT RR SNFSAF  TIS+  C+IRRSLGREG+SF+ +
Subjt:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
A0A6J1HPJ9 pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like2.6e-0469.23Show/hide
Query:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
        LSLT RR SNFSAF ATIS+  C+I+RSLGREG+SF+ +
Subjt:  LSLTLRRASNFSAFTATISDVGCRIRRSLGREGQSFQSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGGTAAACTGCGACAGAGAGGAAATGGAGAAATTATATGAGGTGGAGGATCTAGGGGTTCTGCCCTCTCTATGGCATGAGATGGACTTCTGTTTGTTGGT
TGGACCTCAAACAGGTCCATTAGATACCACCGGTAGCTCGTATAAGAGAGAAAGCTCAAGAGAATTGTTCTCCCTTCCATTCCTTAGTAAACTGGTTCCCAAAATCCGCT
TAATAAGAATCCTTTGGAGATTACCGGTGTCATCTCGTGGTGGTGTTCTTGGAGAGATTATCCAGCATTTTGAAGATCAAGGGGCTGCTGTCTCTGATATGTTTCCACTG
CGTAAGGGTTTTCATCCCTATGGAAAATTGAAGCTTGAGAAGATCCGTACTGAAGACGTTGCAGCTGACGCATTAACCAAAGTGTTGCCTGCTAAAAAGGCTGGAGCTAA
GGGATTTGAGAGTGTTGCCTTGGGTTTGCAATTAGGTCTCTGTGATAGAGTAATTGTCGAAGAAAGTCGTGGAGTGCTTGTGAAGAAGATGACGATTAATCCTTCTATCA
GCGCCGCTTGCAGCCACCGCCGTCACCGGCCGCTGGCCGGAGACTCGTCGTCGGATCTGAAGCTGGCCGTTGGAAAAGAAAGAAGGAACCGCTTGGGGATTTCAGATCTG
ATGCGCGATTCCAGCTTGTTGCCCATGCTTGAGCTCGATGTTGGAGAAGGATCTCGCCGCCCGAACAGATCCGCTCACGATCTCGCTGGAACCCCACACCCTCGCCGCCC
AAATCTGCGCACGAACGCGAAGAACGCCATGAATGCACGAGATCCCCTAGATACGTCTTCTACTCCAAACTTCGACTTCATCCCTCTTCCATGGCGATTCATTGCTCTGT
TTTCACTGCAGCTGACAAAATCCACGCTCCGCCTCTCTCTATTGCAACCCATTTCTCCTTCATTCTTTACCTCATCGGCTCTCCGTTCATTGGCCTCTCACATTCCACAA
ATCGGAGTGCTTTTGTCTCAAACAGTGAGGAGGAAGCTCCTTTCAGTTTGCAATGGAGAGACCTCCTCTCTGTTTTCTTCAGAACTCCAAGGTTTTGGACCATGTGATGC
TTTTGGAAATGGATATGGACTATCGATATGTGAAGTAGGAGTTTTTTCCAAAGCCGTACTCTCCGCCGAGTCAACACTCTACCACTTCACTCAATCTTCCCTCTTTCCAC
CGCTTTCCACCAACTCCTCCGTCAAATTCATGGCATTTCAATGTCTCTCTCTAACTCTCCGTAGAGCTTCAAATTTCTCTGCCTTCACTGCAACAATTTCCGATGTCGGC
TGCCGGATTCGAAGATCGTTGGGACGAGAAGGACAAAGTTTCCAGAGCAGATGCGCGTTCCTGGTTGTAGCTCTCTGCCCTTGTCTCATATGTTTGATTCTCGTTCTCAT
GGTGGTTTTCATTCTTCTCATTGTCAAATTCCATTTGTTTTGCCACACACCTCTTCATTATCTGTTCCTCAAGAAACATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGGTAAACTGCGACAGAGAGGAAATGGAGAAATTATATGAGGTGGAGGATCTAGGGGTTCTGCCCTCTCTATGGCATGAGATGGACTTCTGTTTGTTGGT
TGGACCTCAAACAGGTCCATTAGATACCACCGGTAGCTCGTATAAGAGAGAAAGCTCAAGAGAATTGTTCTCCCTTCCATTCCTTAGTAAACTGGTTCCCAAAATCCGCT
TAATAAGAATCCTTTGGAGATTACCGGTGTCATCTCGTGGTGGTGTTCTTGGAGAGATTATCCAGCATTTTGAAGATCAAGGGGCTGCTGTCTCTGATATGTTTCCACTG
CGTAAGGGTTTTCATCCCTATGGAAAATTGAAGCTTGAGAAGATCCGTACTGAAGACGTTGCAGCTGACGCATTAACCAAAGTGTTGCCTGCTAAAAAGGCTGGAGCTAA
GGGATTTGAGAGTGTTGCCTTGGGTTTGCAATTAGGTCTCTGTGATAGAGTAATTGTCGAAGAAAGTCGTGGAGTGCTTGTGAAGAAGATGACGATTAATCCTTCTATCA
GCGCCGCTTGCAGCCACCGCCGTCACCGGCCGCTGGCCGGAGACTCGTCGTCGGATCTGAAGCTGGCCGTTGGAAAAGAAAGAAGGAACCGCTTGGGGATTTCAGATCTG
ATGCGCGATTCCAGCTTGTTGCCCATGCTTGAGCTCGATGTTGGAGAAGGATCTCGCCGCCCGAACAGATCCGCTCACGATCTCGCTGGAACCCCACACCCTCGCCGCCC
AAATCTGCGCACGAACGCGAAGAACGCCATGAATGCACGAGATCCCCTAGATACGTCTTCTACTCCAAACTTCGACTTCATCCCTCTTCCATGGCGATTCATTGCTCTGT
TTTCACTGCAGCTGACAAAATCCACGCTCCGCCTCTCTCTATTGCAACCCATTTCTCCTTCATTCTTTACCTCATCGGCTCTCCGTTCATTGGCCTCTCACATTCCACAA
ATCGGAGTGCTTTTGTCTCAAACAGTGAGGAGGAAGCTCCTTTCAGTTTGCAATGGAGAGACCTCCTCTCTGTTTTCTTCAGAACTCCAAGGTTTTGGACCATGTGATGC
TTTTGGAAATGGATATGGACTATCGATATGTGAAGTAGGAGTTTTTTCCAAAGCCGTACTCTCCGCCGAGTCAACACTCTACCACTTCACTCAATCTTCCCTCTTTCCAC
CGCTTTCCACCAACTCCTCCGTCAAATTCATGGCATTTCAATGTCTCTCTCTAACTCTCCGTAGAGCTTCAAATTTCTCTGCCTTCACTGCAACAATTTCCGATGTCGGC
TGCCGGATTCGAAGATCGTTGGGACGAGAAGGACAAAGTTTCCAGAGCAGATGCGCGTTCCTGGTTGTAGCTCTCTGCCCTTGTCTCATATGTTTGATTCTCGTTCTCAT
GGTGGTTTTCATTCTTCTCATTGTCAAATTCCATTTGTTTTGCCACACACCTCTTCATTATCTGTTCCTCAAGAAACATTGTTGA
Protein sequenceShow/hide protein sequence
MEKKVNCDREEMEKLYEVEDLGVLPSLWHEMDFCLLVGPQTGPLDTTGSSYKRESSRELFSLPFLSKLVPKIRLIRILWRLPVSSRGGVLGEIIQHFEDQGAAVSDMFPL
RKGFHPYGKLKLEKIRTEDVAADALTKVLPAKKAGAKGFESVALGLQLGLCDRVIVEESRGVLVKKMTINPSISAACSHRRHRPLAGDSSSDLKLAVGKERRNRLGISDL
MRDSSLLPMLELDVGEGSRRPNRSAHDLAGTPHPRRPNLRTNAKNAMNARDPLDTSSTPNFDFIPLPWRFIALFSLQLTKSTLRLSLLQPISPSFFTSSALRSLASHIPQ
IGVLLSQTVRRKLLSVCNGETSSLFSSELQGFGPCDAFGNGYGLSICEVGVFSKAVLSAESTLYHFTQSSLFPPLSTNSSVKFMAFQCLSLTLRRASNFSAFTATISDVG
CRIRRSLGREGQSFQSRCAFLVVALCPCLICLILVLMVVFILLIVKFHLFCHTPLHYLFLKKHC