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Lag0001062 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001062
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:23417597..23418759
RNA-Seq ExpressionLag0001062
SyntenyLag0001062
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]2.8e-1644.66Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII
        N LD CSL DLGF+G  FTW NKR     V  RLD++  N ++ DLF   +V N D+  SDHRPI  ++++ +  Q + + + FRFE  W K  +C+EII
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII

Query:  AQS
         +S
Subjt:  AQS

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]2.8e-1644.66Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII
        N LD CSL DLGF+G  FTW NKR     V  RLD++  N ++ DLF   +V N D+  SDHRPI  ++++ +  Q + + + FRFE  W K  +C+EII
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII

Query:  AQS
         +S
Subjt:  AQS

KAF4399953.1 hypothetical protein G4B88_021167 [Cannabis sativa]1.8e-1537.27Show/hide
Query:  MILEVNMNVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKR
        M+++V+    + C L+D+GF+G  FTW NKR  +  V  RLD++  N  + +LF   +V N D+  SDHRPI   +++    + H + K FRFE  W K 
Subjt:  MILEVNMNVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKR

Query:  DDCKEIIAQS
         +C++I+ Q+
Subjt:  DDCKEIIAQS

KAF7832946.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]1.1e-1543.14Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRH--KHFRFEEFWSKRDDCKE
        +V+DEC+L+DLG+ G  FTWCN RD    V  RLD  +ANL++ DLF ++R+ +L    SDH PI L +++   V    ++  + FRFE+ W   DDC +
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRH--KHFRFEEFWSKRDDCKE

Query:  II
        I+
Subjt:  II

XP_022158772.1 uncharacterized protein LOC111025237 [Momordica charantia]6.7e-1846.53Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII
        NV+D CSL D+GF GG FTWCN R   DQ+   LD+FL N  F  LF D  + +L W+KSDHR I L + +    Q  + HK  RFEE+W +  +C+++I
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII

Query:  A
        +
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A6J1DY29 uncharacterized protein LOC1110252373.3e-1846.53Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII
        NV+D CSL D+GF GG FTWCN R   DQ+   LD+FL N  F  LF D  + +L W+KSDHR I L + +    Q  + HK  RFEE+W +  +C+++I
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII

Query:  A
        +
Subjt:  A

A0A7J6FPV7 CCHC-type domain-containing protein8.9e-1639.6Show/hide
Query:  LDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEIIAQ
        LD+C L+D+GF+G  FTW NKR  +  V  RLD++  N  + +LF   +V N D+  SDHRPI   +++    + + + K FRFE  W K  +C++I+ Q
Subjt:  LDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEIIAQ

Query:  S
        +
Subjt:  S

A0A7J6GGL8 CCHC-type domain-containing protein1.4e-1644.66Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII
        N LD CSL DLGF+G  FTW NKR     V  RLD++  N ++ DLF   +V N D+  SDHRPI  ++++ +  Q + + + FRFE  W K  +C+EII
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII

Query:  AQS
         +S
Subjt:  AQS

A0A7J6GL46 CCHC-type domain-containing protein1.4e-1644.66Show/hide
Query:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII
        N LD CSL DLGF+G  FTW NKR     V  RLD++  N ++ DLF   +V N D+  SDHRPI  ++++ +  Q + + + FRFE  W K  +C+EII
Subjt:  NVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEII

Query:  AQS
         +S
Subjt:  AQS

A0A7J6I9P4 CCHC-type domain-containing protein8.9e-1637.27Show/hide
Query:  MILEVNMNVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKR
        M+++V+    + C L+D+GF+G  FTW NKR  +  V  RLD++  N  + +LF   +V N D+  SDHRPI   +++    + H + K FRFE  W K 
Subjt:  MILEVNMNVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLANLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKR

Query:  DDCKEIIAQS
         +C++I+ Q+
Subjt:  DDCKEIIAQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGTGGAGATATTTCAATGATTCAAGACCATAAGGATTTTATTCCTTGTATTGGAGTTCCTAGTACTCAAGATCATGTTGGTCATTCTTCTGTCGCTAAGGAGAA
GAGGCTAGCAGAAAATAATAAAAGAAAAAAGAAAGGAGCCACTTGGAAGAAGCGAGCACGTGCAAGATTTATTCCGAAGGGGATGATTTTGGAGGTGAATATGAATGTTT
TAGATGAATGCTCTCTCCTAGATCTGGGGTTCCAAGGTGGAACATTCACTTGGTGTAACAAGCGGGATATGATTGATCAGGTGAGCACGAGATTAGATCAATTTCTTGCT
AACCTTCAATTCTGTGATCTCTTTCAAGATTATCGGGTGAATAATCTAGATTGGGCTAAGTCTGACCATCGTCCAATCCAATTGTCTATTGATTCGACGACGTTGGTCCA
AAACCATAAACGACATAAACATTTTCGCTTTGAAGAGTTCTGGTCAAAGCGAGATGATTGCAAAGAGATTATTGCCCAATCGGCGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGTGGAGATATTTCAATGATTCAAGACCATAAGGATTTTATTCCTTGTATTGGAGTTCCTAGTACTCAAGATCATGTTGGTCATTCTTCTGTCGCTAAGGAGAA
GAGGCTAGCAGAAAATAATAAAAGAAAAAAGAAAGGAGCCACTTGGAAGAAGCGAGCACGTGCAAGATTTATTCCGAAGGGGATGATTTTGGAGGTGAATATGAATGTTT
TAGATGAATGCTCTCTCCTAGATCTGGGGTTCCAAGGTGGAACATTCACTTGGTGTAACAAGCGGGATATGATTGATCAGGTGAGCACGAGATTAGATCAATTTCTTGCT
AACCTTCAATTCTGTGATCTCTTTCAAGATTATCGGGTGAATAATCTAGATTGGGCTAAGTCTGACCATCGTCCAATCCAATTGTCTATTGATTCGACGACGTTGGTCCA
AAACCATAAACGACATAAACATTTTCGCTTTGAAGAGTTCTGGTCAAAGCGAGATGATTGCAAAGAGATTATTGCCCAATCGGCGAAATGA
Protein sequenceShow/hide protein sequence
MPRGDISMIQDHKDFIPCIGVPSTQDHVGHSSVAKEKRLAENNKRKKKGATWKKRARARFIPKGMILEVNMNVLDECSLLDLGFQGGTFTWCNKRDMIDQVSTRLDQFLA
NLQFCDLFQDYRVNNLDWAKSDHRPIQLSIDSTTLVQNHKRHKHFRFEEFWSKRDDCKEIIAQSAK