; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001063 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001063
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:23424665..23427796
RNA-Seq ExpressionLag0001063
SyntenyLag0001063
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]5.9e-0929.61Show/hide
Query:  VGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINL-DGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRYGGKS
        +GE+ +VD     F WG  +RVRV +D+S PL+R  K+ L D   C  W+ + YE L +FC    ++GH+ ++  EF     +      YG WLR G  S
Subjt:  VGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINL-DGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRYGGKS

Query:  GLIVWHV--KCLPSHTPRSVTRPGVSMSELGKGHS--DLNQSAFYRLSRGLVFSPTRRKDFSLTSGLQRWRPKFVGILI----------GAASLDDGQFG
            W V          R+   P     E  KG S   +N+ A   L   L           +T G +   P FV  L           G A +D G+ G
Subjt:  GLIVWHV--KCLPSHTPRSVTRPGVSMSELGKGHS--DLNQSAFYRLSRGLVFSPTRRKDFSLTSGLQRWRPKFVGILI----------GAASLDDGQFG

Query:  VLEIKN
          +  N
Subjt:  VLEIKN

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.6e-1751.4Show/hide
Query:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYG
        KT + RL NA+G +EDV+S   +F WG+ LRVRVR DV +PL RGIK+NLDGPM G WI IQYE L +F      + H  KD  +      S S   QYG
Subjt:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYG

Query:  EWLRYGG
         WLR+ G
Subjt:  EWLRYGG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.2e-2255.36Show/hide
Query:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSAT-QY
        KT + RL NA+G + DVD     F WGASLR+RV ID+++PLRRGIKIN+DGPM G WI IQYE L +FC F  +IGH+  D    Y  A+  S AT +Y
Subjt:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSAT-QY

Query:  GEWLRY-GGKSG
        G WLR+ G K+G
Subjt:  GEWLRY-GGKSG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.4e-1546.08Show/hide
Query:  RLENAVGEYEDVDSRNFH-FWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRY
        RL NA+G +E+ D  + +  WG++LRVRV +D+S+PLRRGIK+NLDGP+ G+WI IQYE L +FC               ++    S     QYG WLRY
Subjt:  RLENAVGEYEDVDSRNFH-FWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRY

Query:  GG
         G
Subjt:  GG

XP_024924622.1 uncharacterized protein LOC112489822 [Ziziphus jujuba]7.0e-1034.76Show/hide
Query:  KTESERLENAVGEYEDVDS-RNFHFWGASLRVRVR--IDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQ
        KT    + + +G+   VDS    H WG  +RVRVR  ID+ +PLRRG+ I  DG     W+  QYE L EFC    ++GH+ KD       +     A Q
Subjt:  KTESERLENAVGEYEDVDS-RNFHFWGASLRVRVR--IDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQ

Query:  YGEWLRYGGKSGLIVWHVKCLPSHTPRSVTRPGVSMSELGKGHSDLNQSAFYRLSRGLVFSPTR
        YG WLR    +     + K +  H  + V+R G  + E        NQ      SR  + SPTR
Subjt:  YGEWLRYGGKSGLIVWHVKCLPSHTPRSVTRPGVSMSELGKGHSDLNQSAFYRLSRGLVFSPTR

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054811.3e-1751.4Show/hide
Query:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYG
        KT + RL NA+G +EDV+S   +F WG+ LRVRVR DV +PL RGIK+NLDGPM G WI IQYE L +F      + H  KD  +      S S   QYG
Subjt:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYG

Query:  EWLRYGG
         WLR+ G
Subjt:  EWLRYGG

A0A6J1DU55 uncharacterized protein LOC1110231355.9e-2355.36Show/hide
Query:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSAT-QY
        KT + RL NA+G + DVD     F WGASLR+RV ID+++PLRRGIKIN+DGPM G WI IQYE L +FC F  +IGH+  D    Y  A+  S AT +Y
Subjt:  KTESERLENAVGEYEDVDSRNFHF-WGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSAT-QY

Query:  GEWLRY-GGKSG
        G WLR+ G K+G
Subjt:  GEWLRY-GGKSG

A0A6J1DX30 uncharacterized protein LOC1110248744.5e-1546.08Show/hide
Query:  RLENAVGEYEDVDSRNFH-FWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRY
        RL NA+G +E+ D  + +  WG++LRVRV +D+S+PLRRGIK+NLDGP+ G+WI IQYE L +FC               ++    S     QYG WLRY
Subjt:  RLENAVGEYEDVDSRNFH-FWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRY

Query:  GG
         G
Subjt:  GG

A0A6P6FRB5 uncharacterized protein LOC1124898223.4e-1034.76Show/hide
Query:  KTESERLENAVGEYEDVDS-RNFHFWGASLRVRVR--IDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQ
        KT    + + +G+   VDS    H WG  +RVRVR  ID+ +PLRRG+ I  DG     W+  QYE L EFC    ++GH+ KD       +     A Q
Subjt:  KTESERLENAVGEYEDVDS-RNFHFWGASLRVRVR--IDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQ

Query:  YGEWLRYGGKSGLIVWHVKCLPSHTPRSVTRPGVSMSELGKGHSDLNQSAFYRLSRGLVFSPTR
        YG WLR    +     + K +  H  + V+R G  + E        NQ      SR  + SPTR
Subjt:  YGEWLRYGGKSGLIVWHVKCLPSHTPRSVTRPGVSMSELGKGHSDLNQSAFYRLSRGLVFSPTR

A0A6P9EGW2 uncharacterized protein LOC1183486454.1e-0839.45Show/hide
Query:  TFWKTESERLENAVGE--YEDVDSRNFHFWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHS-S
        T  K  SE+L  + G+    DVD +    WG  LRV+V ID+S+PL RG  IN+      SWI  +YE L  FC +  I+ HT       +    +H+ S
Subjt:  TFWKTESERLENAVGE--YEDVDSRNFHFWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHS-S

Query:  ATQYGEWLR
          QYG WLR
Subjt:  ATQYGEWLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATATCAATCTGAAATAGTGAGCAGCTGTGTACCACATTGTATAGCAATATCGGTGAGTGTTTGGGTGCTTTCGATTCGAGTTGTTTTTTATCCCTCTTTTCTCAA
TGTGCAAATGGATCCTCTTTACTTGGCAGAAGACTGGTCCAAATTAAGCTTAAGCCTCACTCAAGCTGAGGAAGATGTTTCTGTTGATGTGAATCGTTCTGCTCTGGAGT
TTACGAGTCAACTTTTGAGTTGTTGCTTGTTTGGAAAATTGTTTTCTCACAAGATTTTGGCCGCTGAAATCATGAAGAAAACTTTTTGGAAGACAGAGAGTGAAAGGCTA
GAAAATGCAGTAGGGGAATATGAAGACGTTGATAGTAGGAATTTCCATTTCTGGGGTGCTAGCCTTCGTGTGCGTGTTCGGATTGATGTCTCTCGACCTCTTCGACGTGG
AATCAAAATCAATCTTGATGGTCCCATGTGTGGTAGCTGGATAACCATTCAGTATGAAATATTGTCGGAGTTTTGTTCATTCAGTGAAATTATTGGCCACACTTGGAAGG
ATGGTGGTGAGTTTTATAAATACGCTAGATCTCACAGTTCTGCTACTCAATATGGGGAATGGCTTCGATATGGTGGGAAGAGTGGTCTGATTGTTTGGCACGTCAAATGT
TTACCTTCTCACACGCCTAGGAGTGTAACTCGACCAGGTGTATCGATGTCAGAGTTGGGGAAGGGTCACTCTGATCTTAATCAATCGGCTTTCTACAGGCTGTCGAGAGG
CCTCGTTTTTTCTCCCACCAGAAGGAAGGATTTCAGTCTGACGTCTGGTCTGCAAAGGTGGAGGCCTAAGTTTGTGGGAATACTCATCGGAGCTGCCAGTCTGGACGACG
GTCAATTTGGTGTTCTCGAGATCAAGAATGACATTTTGCTCACTCTCACGAAAAATATTCACAGAAAACAATCTGCTCTCCCATTCCCTTCAGAGAAAGTTTTTTCTTGT
CCCCACAAGCAACCTCTGTCATTGCCTTGTGAGAATACTGGTGAAGACTGTGTGGTGGTGTTTTTTGGAGAACGGTCCAGCAAGGAACAAGTTCAAGGCTGCTGCAATTT
CGTAGAAAAACACAAGGAAACGGTGAATTCGGTCAAGATTGTTAACAGGAATTTTGATGGGCGGAAATTAGCTTGTGCTAAATGGCTGGTCATGGAGGAAGTGAAGATGC
TGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTATATCAATCTGAAATAGTGAGCAGCTGTGTACCACATTGTATAGCAATATCGGTGAGTGTTTGGGTGCTTTCGATTCGAGTTGTTTTTTATCCCTCTTTTCTCAA
TGTGCAAATGGATCCTCTTTACTTGGCAGAAGACTGGTCCAAATTAAGCTTAAGCCTCACTCAAGCTGAGGAAGATGTTTCTGTTGATGTGAATCGTTCTGCTCTGGAGT
TTACGAGTCAACTTTTGAGTTGTTGCTTGTTTGGAAAATTGTTTTCTCACAAGATTTTGGCCGCTGAAATCATGAAGAAAACTTTTTGGAAGACAGAGAGTGAAAGGCTA
GAAAATGCAGTAGGGGAATATGAAGACGTTGATAGTAGGAATTTCCATTTCTGGGGTGCTAGCCTTCGTGTGCGTGTTCGGATTGATGTCTCTCGACCTCTTCGACGTGG
AATCAAAATCAATCTTGATGGTCCCATGTGTGGTAGCTGGATAACCATTCAGTATGAAATATTGTCGGAGTTTTGTTCATTCAGTGAAATTATTGGCCACACTTGGAAGG
ATGGTGGTGAGTTTTATAAATACGCTAGATCTCACAGTTCTGCTACTCAATATGGGGAATGGCTTCGATATGGTGGGAAGAGTGGTCTGATTGTTTGGCACGTCAAATGT
TTACCTTCTCACACGCCTAGGAGTGTAACTCGACCAGGTGTATCGATGTCAGAGTTGGGGAAGGGTCACTCTGATCTTAATCAATCGGCTTTCTACAGGCTGTCGAGAGG
CCTCGTTTTTTCTCCCACCAGAAGGAAGGATTTCAGTCTGACGTCTGGTCTGCAAAGGTGGAGGCCTAAGTTTGTGGGAATACTCATCGGAGCTGCCAGTCTGGACGACG
GTCAATTTGGTGTTCTCGAGATCAAGAATGACATTTTGCTCACTCTCACGAAAAATATTCACAGAAAACAATCTGCTCTCCCATTCCCTTCAGAGAAAGTTTTTTCTTGT
CCCCACAAGCAACCTCTGTCATTGCCTTGTGAGAATACTGGTGAAGACTGTGTGGTGGTGTTTTTTGGAGAACGGTCCAGCAAGGAACAAGTTCAAGGCTGCTGCAATTT
CGTAGAAAAACACAAGGAAACGGTGAATTCGGTCAAGATTGTTAACAGGAATTTTGATGGGCGGAAATTAGCTTGTGCTAAATGGCTGGTCATGGAGGAAGTGAAGATGC
TGTAG
Protein sequenceShow/hide protein sequence
MLYQSEIVSSCVPHCIAISVSVWVLSIRVVFYPSFLNVQMDPLYLAEDWSKLSLSLTQAEEDVSVDVNRSALEFTSQLLSCCLFGKLFSHKILAAEIMKKTFWKTESERL
ENAVGEYEDVDSRNFHFWGASLRVRVRIDVSRPLRRGIKINLDGPMCGSWITIQYEILSEFCSFSEIIGHTWKDGGEFYKYARSHSSATQYGEWLRYGGKSGLIVWHVKC
LPSHTPRSVTRPGVSMSELGKGHSDLNQSAFYRLSRGLVFSPTRRKDFSLTSGLQRWRPKFVGILIGAASLDDGQFGVLEIKNDILLTLTKNIHRKQSALPFPSEKVFSC
PHKQPLSLPCENTGEDCVVVFFGERSSKEQVQGCCNFVEKHKETVNSVKIVNRNFDGRKLACAKWLVMEEVKML