; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001071 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001071
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:23510946..23511992
RNA-Seq ExpressionLag0001071
SyntenyLag0001071
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.3e-4452.87Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS R WF++LKR+SIS FK+LARAF+ QF G   + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ

Query:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK
        +  ESL DY+ RFN E LQVEG  +   L+   +G++DE+L+ S GK    T++E  SRAQ YMS  EL+ SK+
Subjt:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.4e-4654.8Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLT
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS+A++CR F  TL+GSAR WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLT

Query:  VKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK
        +KQ+  ESL DY+ RFN+E LQVEG     +L+A  + + DE L  S GK  P T++E +SRAQKYMSA E   SK+
Subjt:  VKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]4.9e-4750.74Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + + +AIRCR F FTLTGSAR+WF +LKR SIS FK+LA AF+ QF+G R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ

Query:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLK------------SKKTEREHERFSSSSYD
        +  ESL +Y+ RFN+E LQVEG  +  AL+A  +G++DERL+ S GK  P T+ E +SRAQKYMSA EL+             S K ER  E+   SS++
Subjt:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLK------------SKKTEREHERFSSSSYD

Query:  RVD
        R D
Subjt:  RVD

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.8e-5642.26Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG
        +EEL+DQ D PFTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+RCR F  TL GSAR WF +LKR SIS FK LARAF+ QF+G
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG

Query:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------K
         R + +P   LLT+KQ+  ESL DY+ RFN+E LQVEG  +  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMSA E   SK          K
Subjt:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------K

Query:  TEREHERFSSSSYDRVDFDGDTE-------YKP-------------------------AQRAQKAE-------------VKNCIQLKDEIEALIRNGYLK
         ER  ++   S +++ D     +       Y P                         A  A++++              ++C  LK+E+E LIR GYLK
Subjt:  TEREHERFSSSSYDRVDFDGDTE-------YKP-------------------------AQRAQKAE-------------VKNCIQLKDEIEALIRNGYLK

Query:  EFTTKAEADQ
        E+  + +A Q
Subjt:  EFTTKAEADQ

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]4.6e-5354.19Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG
        +EEL+ Q D PFTEE+M+ +VP KFK+PT KP+DG  +PV HL+AY+ WMD +GVSDAIRCR F  TL GSAR WF +LKR SIS FK LARAF+ QF+G
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG

Query:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKS------KKTERE
         R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG  +  +L+A  +G+ DE L  S  K  P T++E +SRAQ+YMSA E   S      K+T+++
Subjt:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKS------KKTERE

Query:  HER
         ER
Subjt:  HER

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166196.4e-4552.87Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS R WF++LKR+SIS FK+LARAF+ QF G   + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ

Query:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK
        +  ESL DY+ RFN E LQVEG  +   L+   +G++DE+L+ S GK    T++E  SRAQ YMS  EL+ SK+
Subjt:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK

A0A6J1D7D2 uncharacterized protein LOC1110183076.9e-4754.8Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLT
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS+A++CR F  TL+GSAR WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLT

Query:  VKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK
        +KQ+  ESL DY+ RFN+E LQVEG     +L+A  + + DE L  S GK  P T++E +SRAQKYMSA E   SK+
Subjt:  VKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK

A0A6J1DWY0 uncharacterized protein LOC1110252932.8e-5642.26Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG
        +EEL+DQ D PFTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+RCR F  TL GSAR WF +LKR SIS FK LARAF+ QF+G
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG

Query:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------K
         R + +P   LLT+KQ+  ESL DY+ RFN+E LQVEG  +  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMSA E   SK          K
Subjt:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------K

Query:  TEREHERFSSSSYDRVDFDGDTE-------YKP-------------------------AQRAQKAE-------------VKNCIQLKDEIEALIRNGYLK
         ER  ++   S +++ D     +       Y P                         A  A++++              ++C  LK+E+E LIR GYLK
Subjt:  TEREHERFSSSSYDRVDFDGDTE-------YKP-------------------------AQRAQKAE-------------VKNCIQLKDEIEALIRNGYLK

Query:  EFTTKAEADQ
        E+  + +A Q
Subjt:  EFTTKAEADQ

A0A6J1DZ49 uncharacterized protein LOC1110248512.4e-4750.74Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + + +AIRCR F FTLTGSAR+WF +LKR SIS FK+LA AF+ QF+G R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQ

Query:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLK------------SKKTEREHERFSSSSYD
        +  ESL +Y+ RFN+E LQVEG  +  AL+A  +G++DERL+ S GK  P T+ E +SRAQKYMSA EL+             S K ER  E+   SS++
Subjt:  QPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLK------------SKKTEREHERFSSSSYD

Query:  RVD
        R D
Subjt:  RVD

A0A6J1E1E7 uncharacterized protein LOC1110255482.2e-5354.19Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG
        +EEL+ Q D PFTEE+M+ +VP KFK+PT KP+DG  +PV HL+AY+ WMD +GVSDAIRCR F  TL GSAR WF +LKR SIS FK LARAF+ QF+G
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMG

Query:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKS------KKTERE
         R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG  +  +L+A  +G+ DE L  S  K  P T++E +SRAQ+YMSA E   S      K+T+++
Subjt:  AREQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKS------KKTERE

Query:  HER
         ER
Subjt:  HER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATTAATCGACCAAGTTGACCCACCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGCAAGAA
AGACCCTGTCCAGCATCTAAACGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCCGTGCATTCTTTTTCACCCTAACAGGATCAGCCAGAC
ATTGGTTTGAGAGGTTGAAAAGGAGATCCATCAGCTGTTTCAAGGATTTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAACGCAAGCCTCACATCAAC
CTTTTAACAGTCAAACAGCAGCCGGGGGAGAGCTTGTGTGATTACATAACGCGCTTTAACGACGAAGCACTGCAGGTTGAGGGATACGGTGAGGGAGCGGCCCTAGTAGC
CATCACAGCCGGACTGGAAGACGAAAGACTACTCAACTCAATAGGTAAGAGCCAACCCCGAACCTATGCAGAGTTCGTCTCCCGGGCGCAGAAATACATGAGCGCAGAGG
AGTTGCTCAAGTCAAAGAAGACGGAACGAGAGCACGAGAGGTTTTCTTCATCTAGCTATGACAGAGTAGATTTTGATGGAGATACGGAATACAAGCCTGCTCAACGCGCC
CAGAAAGCTGAAGTCAAGAACTGCATCCAGCTAAAAGACGAAATTGAAGCACTAATTCGGAACGGATACTTGAAAGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATG
GTCGGGGCCGACTAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCTCTGGAAATCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATTAATCGACCAAGTTGACCCACCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGCAAGAA
AGACCCTGTCCAGCATCTAAACGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCCGTGCATTCTTTTTCACCCTAACAGGATCAGCCAGAC
ATTGGTTTGAGAGGTTGAAAAGGAGATCCATCAGCTGTTTCAAGGATTTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAACGCAAGCCTCACATCAAC
CTTTTAACAGTCAAACAGCAGCCGGGGGAGAGCTTGTGTGATTACATAACGCGCTTTAACGACGAAGCACTGCAGGTTGAGGGATACGGTGAGGGAGCGGCCCTAGTAGC
CATCACAGCCGGACTGGAAGACGAAAGACTACTCAACTCAATAGGTAAGAGCCAACCCCGAACCTATGCAGAGTTCGTCTCCCGGGCGCAGAAATACATGAGCGCAGAGG
AGTTGCTCAAGTCAAAGAAGACGGAACGAGAGCACGAGAGGTTTTCTTCATCTAGCTATGACAGAGTAGATTTTGATGGAGATACGGAATACAAGCCTGCTCAACGCGCC
CAGAAAGCTGAAGTCAAGAACTGCATCCAGCTAAAAGACGAAATTGAAGCACTAATTCGGAACGGATACTTGAAAGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATG
GTCGGGGCCGACTAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCTCTGGAAATCCGTTGA
Protein sequenceShow/hide protein sequence
MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSARHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHIN
LLTVKQQPGESLCDYITRFNDEALQVEGYGEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKKTEREHERFSSSSYDRVDFDGDTEYKPAQRA
QKAEVKNCIQLKDEIEALIRNGYLKEFTTKAEADQRWSGPTRDDPDKNGGGPPLEIR