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Lag0001109 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001109
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr4:24596230..24596727
RNA-Seq ExpressionLag0001109
SyntenyLag0001109
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020080379.1 uncharacterized protein LOC109704055 [Ananas comosus]3.0e-2847.89Show/hide
Query:  SSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICL
        SSW+A++Y+ RFR    W L    E V ++++ S+S+++ YRAKRKA+R I G+   QY  LWDY  E+++SN GS+  I CD      N  F+ LY+CL
Subjt:  SSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICL

Query:  MGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI
          CK GFL GCR  ISLD C LK    G L++AVG+D ND I
Subjt:  MGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI

XP_020410864.1 uncharacterized protein LOC18790822 [Prunus persica]1.6e-2941.55Show/hide
Query:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI
        ++SSW+  +Y+   +    W +   +E V+ +    +S+ Q YRAK +A+R+I G  T QY R+WDYC EL+++N G++ K+ CD   +  + VF+RLY+
Subjt:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI

Query:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGND
        CL  CK GF+ GCR  I LD C LKG  +G  ++AVG+D N+
Subjt:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGND

XP_020421390.1 uncharacterized protein LOC18773438 [Prunus persica]2.5e-3042.66Show/hide
Query:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI
        M+SSW++ +Y+   +    W +   +E V  + N  +S+ Q YRAK +A+R+I G  T QY R+W+YC EL+++N G++ K+LCD   +  + VF+RLY+
Subjt:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI

Query:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD
        C   CK GF+VGCR  I LD C LKG   G  ++AVG+D N++
Subjt:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD

XP_021809684.1 uncharacterized protein LOC110753168 [Prunus avium]9.4e-3041.26Show/hide
Query:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI
        ++SSW+  +Y+   +    W +   +E V+ + N  +S+ Q YRAK +A+R+I G  T QY R+WDYC EL+++N G+++K+ CD   +  + VF+ LY+
Subjt:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI

Query:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD
        CL  CK GF+ GCR  I LD C LKG   G  ++AVG+D N++
Subjt:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD

XP_034200674.1 uncharacterized protein LOC117615656 [Prunus dulcis]2.1e-2941.55Show/hide
Query:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI
        ++SSW+  +Y+   +    W +   +E V+ +    +S+ Q YRAK +A+R+I G  T QY R+WDYC EL+++N G++ K+ CD   +  + VF+RLY+
Subjt:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI

Query:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGND
        CL  CK GF+ GCR  I LD C LKG  +G  ++AVG+D N+
Subjt:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGND

TrEMBL top hitse value%identityAlignment
A0A6P5EAS5 uncharacterized protein LOC1097040551.5e-2847.89Show/hide
Query:  SSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICL
        SSW+A++Y+ RFR    W L    E V ++++ S+S+++ YRAKRKA+R I G+   QY  LWDY  E+++SN GS+  I CD      N  F+ LY+CL
Subjt:  SSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICL

Query:  MGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI
          CK GFL GCR  ISLD C LK    G L++AVG+D ND I
Subjt:  MGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI

A0A6P5RGQ6 uncharacterized protein LOC1107461081.9e-2844.29Show/hide
Query:  WIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICLMG
        WI  R+ ++ ++   W L      V    +  +SK+Q YRAK+ A  +I G    QY RLWDY  +L+++N+GS+VKI CD V  ++  +F+R+Y+CL  
Subjt:  WIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICLMG

Query:  CKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI
        CK GFL GCR  I +DACHLKGP  G +++AVG+DGN+ +
Subjt:  CKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI

A0A6P5RMH4 uncharacterized protein LOC1107501383.3e-2843.57Show/hide
Query:  WIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICLMG
        WI  R+ ++ ++   W L      V    +  +SK+Q YRAK+ A  +I G    QY RLWDY  +L+++N+GS+VKI CD V  ++  +F+R+Y+CL+ 
Subjt:  WIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICLMG

Query:  CKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI
        CK GFL GCR  I +DACHLKGP  G +++AVG++GN+ +
Subjt:  CKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDI

A0A6P5S249 uncharacterized protein LOC1107531684.6e-3041.26Show/hide
Query:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI
        ++SSW+  +Y+   +    W +   +E V+ + N  +S+ Q YRAK +A+R+I G  T QY R+WDYC EL+++N G+++K+ CD   +  + VF+ LY+
Subjt:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI

Query:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD
        CL  CK GF+ GCR  I LD C LKG   G  ++AVG+D N++
Subjt:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD

M5WE74 MULE domain-containing protein1.2e-3042.66Show/hide
Query:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI
        M+SSW++ +Y+   +    W +   +E V  + N  +S+ Q YRAK +A+R+I G  T QY R+W+YC EL+++N G++ K+LCD   +  + VF+RLY+
Subjt:  MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYI

Query:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD
        C   CK GF+VGCR  I LD C LKG   G  ++AVG+D N++
Subjt:  CLMGCKDGFLVGCRQFISLDACHLKGPCQGHLMSAVGMDGNDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCGTCCTGGATTGCTAGAAGATACCTAGCAAGGTTTAGACAACAACTGGATTGGAGGTTGTGTGATATCATTGAAAGAGTGAAGAGTGAGCTTAACTGTTCTCT
TTCGAAGAGCCAGACATATAGGGCTAAAAGGAAGGCAGTTAGAGAGATTAATGGGACCATGACTGCACAATACCAACGGTTGTGGGATTATTGTGCTGAGCTTCAGAGGT
CGAATGAGGGATCATCTGTGAAAATACTATGTGATAGGGTGACTGAGGACAGTAATCATGTATTTAGACGCCTATACATTTGCTTGATGGGTTGCAAGGATGGTTTCTTG
GTAGGATGTAGACAATTCATTTCACTAGACGCATGCCACTTGAAGGGTCCATGTCAAGGACACCTTATGTCTGCGGTTGGAATGGATGGGAATGACGACATTGAAGGGAA
TAAAAGTCCCCACGTAGTGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCGTCCTGGATTGCTAGAAGATACCTAGCAAGGTTTAGACAACAACTGGATTGGAGGTTGTGTGATATCATTGAAAGAGTGAAGAGTGAGCTTAACTGTTCTCT
TTCGAAGAGCCAGACATATAGGGCTAAAAGGAAGGCAGTTAGAGAGATTAATGGGACCATGACTGCACAATACCAACGGTTGTGGGATTATTGTGCTGAGCTTCAGAGGT
CGAATGAGGGATCATCTGTGAAAATACTATGTGATAGGGTGACTGAGGACAGTAATCATGTATTTAGACGCCTATACATTTGCTTGATGGGTTGCAAGGATGGTTTCTTG
GTAGGATGTAGACAATTCATTTCACTAGACGCATGCCACTTGAAGGGTCCATGTCAAGGACACCTTATGTCTGCGGTTGGAATGGATGGGAATGACGACATTGAAGGGAA
TAAAAGTCCCCACGTAGTGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAA
Protein sequenceShow/hide protein sequence
MRSSWIARRYLARFRQQLDWRLCDIIERVKSELNCSLSKSQTYRAKRKAVREINGTMTAQYQRLWDYCAELQRSNEGSSVKILCDRVTEDSNHVFRRLYICLMGCKDGFL
VGCRQFISLDACHLKGPCQGHLMSAVGMDGNDDIEGNKSPHVVEAHRLDLTPYIN