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Lag0001112 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001112
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr4:24628781..24629107
RNA-Seq ExpressionLag0001112
SyntenyLag0001112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.4e-1850.52Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ +K  E++Y FNP+ T KRTLSKFL  VH  E+QK +K KG EE +  DYL ++ + +I+E+KGL LLA+CIYG V++P+ +GYVD  V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.2e-1952.58Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ EK  E++Y FNP+ T KRTLSKFL  VH  E+QK +KVKG EE +  DYL ++ + +I+E+KGL LLA+CIYG V++P+ +GYVD  V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]1.4e-1850.52Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ +K  E++Y FNP+ T KRTLSKFL  VH  E+QK +K KG EE +  DYL ++ + +I+E+KGL LLA+CIYG V++P+ +GYVD  V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]4.4e-2051.55Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ EK  E++Y FNP+ T KRTLSKFL  VH  E+QK +K+KG EE +  DYL ++ + +++E+KGL LLA+CIYG V++P+ +GYVDG V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]1.9e-1852.13Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVV
        ML++  K  E++Y FNP+ T KRTLSKFL  VH  ++QK +KVKG EE +  DYL ++ + +++E+KGL LLA+CIYG V++P+ +GYVDG  V
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVV

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein6.9e-1950.52Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ +K  E++Y FNP+ T KRTLSKFL  VH  E+QK +K KG EE +  DYL ++ + +I+E+KGL LLA+CIYG V++P+ +GYVD  V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

A0A5A7T5S7 Girdin-like1.1e-1952.58Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ EK  E++Y FNP+ T KRTLSKFL  VH  E+QK +KVKG EE +  DYL ++ + +I+E+KGL LLA+CIYG V++P+ +GYVD  V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

A0A5A7T6E2 Girdin-like6.9e-1950.52Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ +K  E++Y FNP+ T KRTLSKFL  VH  E+QK +K KG EE +  DYL ++ + +I+E+KGL LLA+CIYG V++P+ +GYVD  V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

A0A5A7UWQ6 Uncharacterized protein2.1e-2051.55Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY
        ML++ EK  E++Y FNP+ T KRTLSKFL  VH  E+QK +K+KG EE +  DYL ++ + +++E+KGL LLA+CIYG V++P+ +GYVDG V+  +
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFY

A0A5A7VFL0 Girdin-like9.0e-1952.13Show/hide
Query:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVV
        ML++  K  E++Y FNP+ T KRTLSKFL  VH  ++QK +KVKG EE +  DYL ++ + +++E+KGL LLA+CIYG V++P+ +GYVDG  V
Subjt:  MLNIEEKGGEMIYCFNPQLTAKRTLSKFL-VVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTGAACATTGAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAAATTTCTAGTTGTACACCTAAAGGAAGT
GCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTGTATATTTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGTCTGGTTCTGTTAGCTG
TGTGCATCTACGGGATGGTCTTGTATCCTAGAGTTAAAGGATATGTGGATGGTGATGTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTGAACATTGAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAAATTTCTAGTTGTACACCTAAAGGAAGT
GCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTGTATATTTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGTCTGGTTCTGTTAGCTG
TGTGCATCTACGGGATGGTCTTGTATCCTAGAGTTAAAGGATATGTGGATGGTGATGTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
Protein sequenceShow/hide protein sequence
MMLNIEEKGGEMIYCFNPQLTAKRTLSKFLVVHLKEVQKNVKVKGVEECIFADYLTELARKHINEEKGLVLLAVCIYGMVLYPRVKGYVDGDVVGFYALKLVDSECNR