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Lag0001129 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001129
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiongeneral transcription factor 3C polypeptide 5-like
Genome locationchr4:24895743..24896606
RNA-Seq ExpressionLag0001129
SyntenyLag0001129
Gene Ontology termsGO:0006384 - transcription initiation from RNA polymerase III promoter (biological process)
GO:0015074 - DNA integration (biological process)
GO:0000127 - transcription factor TFIIIC complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588837.1 General transcription factor 3C polypeptide 5, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3886.67Show/hide
Query:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS
        +IN+DKLEAN  EED EDGLAVESGDEALD Y+E++MVGDDDEISLQ HSYLNMDDVSRTHLQELFGSFPS+DED QK+DDGD SEEEYQIYEQDSDIDS
Subjt:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS

Query:  DDDDS
        DDDDS
Subjt:  DDDDS

KAG7022593.1 General transcription factor 3C polypeptide 5, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-3886.67Show/hide
Query:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS
        +IN+DKLEAN  EED EDGLAVESGDEALD Y+E++MVGDDDEISLQ HSYLNMDDVSRTHLQELFGSFPS+DED QK+DDGD SEEEYQIYEQDSDIDS
Subjt:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS

Query:  DDDDS
        DDDDS
Subjt:  DDDDS

XP_022989615.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima]2.3e-3785.71Show/hide
Query:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS
        +IN+DKLE N  EED EDGLAVESGDEALD Y+E++MVGDDDEISLQ HSYLNMDDVSRTHLQELFGSFPS+DED QK+DDGD SEEEYQIYEQDSDIDS
Subjt:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS

Query:  DDDDS
        DDDDS
Subjt:  DDDDS

XP_023530657.1 general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo]7.8e-3886.67Show/hide
Query:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS
        +IN+DKLEAN  EED EDGLAVESGDEALD Y+E++MVGDDDEISLQ HSYLNMDDVSRTHLQELFGSFPS+DED QK+DDGD SEEEYQIYEQDSDIDS
Subjt:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS

Query:  DDDDS
        DDDDS
Subjt:  DDDDS

XP_038888323.1 transcription factor tau subunit sfc1-like [Benincasa hispida]1.6e-3885.19Show/hide
Query:  MINEDKLEANYAEEDE---EDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSD
        +IN+DKLEANYAEEDE   EDGL VESGDEALDAY+ +DMVGDDDEISLQ HSYLNM++VSRTHLQELFGSFPSLDEDG KMDDGD SEEEYQIYEQD+D
Subjt:  MINEDKLEANYAEEDE---EDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSD

Query:  IDSDDDDS
        +DSDDDDS
Subjt:  IDSDDDDS

TrEMBL top hitse value%identityAlignment
A0A0A0KV91 Uncharacterized protein9.6e-3477.67Show/hide
Query:  NEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQK-MDDGDCSEEEYQIYEQDSDIDSD
        ++DKL+A+YAEEDEEDG+ VESG+EALDAY++++MVGDDDE SL  HSYL M+DVSRTHLQELFGSFPSLDEDG+K MDDGD S+EEYQIYEQD+D+DSD
Subjt:  NEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQK-MDDGDCSEEEYQIYEQDSDIDSD

Query:  DDD
        +DD
Subjt:  DDD

A0A1S4E516 general transcription factor 3C polypeptide 5-like isoform X11.4e-3275.45Show/hide
Query:  MINEDKL-EANY----AEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQK-MDDGDCSEEEYQIYEQ
        +I++DKL +A+Y    AEEDEEDGL VESG+EALDAY++++MVGDDDE SLQ HSYL+M+D+SRTHLQELFGSFPSLDEDG+K MDDGD S+EEYQIYEQ
Subjt:  MINEDKL-EANY----AEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQK-MDDGDCSEEEYQIYEQ

Query:  DSDIDSDDDD
        D+D+DSDDDD
Subjt:  DSDIDSDDDD

A0A5D3DYA7 General transcription factor 3C polypeptide 5-like isoform X21.4e-3275.45Show/hide
Query:  MINEDKL-EANY----AEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQK-MDDGDCSEEEYQIYEQ
        +I++DKL +A+Y    AEEDEEDGL VESG+EALDAY++++MVGDDDE SLQ HSYL+M+D+SRTHLQELFGSFPSLDEDG+K MDDGD S+EEYQIYEQ
Subjt:  MINEDKL-EANY----AEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQK-MDDGDCSEEEYQIYEQ

Query:  DSDIDSDDDD
        D+D+DSDDDD
Subjt:  DSDIDSDDDD

A0A6J1EPX9 general transcription factor 3C polypeptide 5-like3.2e-3784.76Show/hide
Query:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS
        +IN+DKLEAN  E  +EDGLAVESGDEALD Y+E++MVGDDDEISLQ HSYLNMDDVSRTHLQELFGSFPS+DED QK+DDGD SEEEYQIYEQDSDIDS
Subjt:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS

Query:  DDDDS
        DDDDS
Subjt:  DDDDS

A0A6J1JKL2 general transcription factor 3C polypeptide 5-like1.1e-3785.71Show/hide
Query:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS
        +IN+DKLE N  EED EDGLAVESGDEALD Y+E++MVGDDDEISLQ HSYLNMDDVSRTHLQELFGSFPS+DED QK+DDGD SEEEYQIYEQDSDIDS
Subjt:  MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDS

Query:  DDDDS
        DDDDS
Subjt:  DDDDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49410.1 Transcription factor IIIC, subunit 53.1e-0842.86Show/hide
Query:  INEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDED---GQKMDDGDCSEEEYQIYEQDS--
        +NE+ ++AN  E+ E++ L  E  DE  +  EE DM   D+EISL  H YL+ ++ SRT+LQ LF SFPS + +      +DDG  S+ E+QIYE++S  
Subjt:  INEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDED---GQKMDDGDCSEEEYQIYEQDS--

Query:  ----DIDSDDDD
            D D +DDD
Subjt:  ----DIDSDDDD

AT5G24450.1 Transcription factor IIIC, subunit 54.9e-0637.5Show/hide
Query:  EDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDED--GQKMDDGDCSEEEYQIYEQDSD-IDS
        +D  +     ++++D +  +   E LD  +EY+   +DD+IS+  H Y +M++ SRT+LQ LF  FPS      G   DD D S+ EY IYEQ+S+ +D 
Subjt:  EDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDED--GQKMDDGDCSEEEYQIYEQDSD-IDS

Query:  DDDD
        D++D
Subjt:  DDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATGAAGACAAACTGGAAGCTAATTACGCTGAAGAAGATGAAGAAGATGGCCTAGCAGTTGAGAGCGGTGATGAGGCATTAGATGCGTATGAAGAATATGATAT
GGTTGGTGACGACGACGAGATCTCTCTACAGCCACATTCATATCTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAGCTGTTTGGTAGCTTTCCGTCATTGGATG
AAGATGGCCAGAAAATGGACGATGGAGATTGCAGTGAGGAAGAGTATCAAATATACGAGCAAGATAGTGATATTGACTCTGACGACGATGACTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAATGAAGACAAACTGGAAGCTAATTACGCTGAAGAAGATGAAGAAGATGGCCTAGCAGTTGAGAGCGGTGATGAGGCATTAGATGCGTATGAAGAATATGATAT
GGTTGGTGACGACGACGAGATCTCTCTACAGCCACATTCATATCTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAGCTGTTTGGTAGCTTTCCGTCATTGGATG
AAGATGGCCAGAAAATGGACGATGGAGATTGCAGTGAGGAAGAGTATCAAATATACGAGCAAGATAGTGATATTGACTCTGACGACGATGACTCATAG
Protein sequenceShow/hide protein sequence
MINEDKLEANYAEEDEEDGLAVESGDEALDAYEEYDMVGDDDEISLQPHSYLNMDDVSRTHLQELFGSFPSLDEDGQKMDDGDCSEEEYQIYEQDSDIDSDDDDS