; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001131 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001131
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:25007823..25009063
RNA-Seq ExpressionLag0001131
SyntenyLag0001131
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.8e-2828.25Show/hide
Query:  AASSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTS
        +   +DE++W  DKKG + VKS Y LALN +  +E   S+ S    +W+  W +    + KI+ W+ L +ILP+A NL K+     P+C  C+   E+ S
Subjt:  AASSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTS

Query:  HTFWGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVE---KLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRP
        H    CK   +IW+   P     L        + DF+S + E   + S  E E+  +  W IW+ +NK + +  +S    +      +++   L+  +R 
Subjt:  HTFWGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVE---KLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRP

Query:  YQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDC
         +     G  +    Q  W P  QN  KLN  A+ +    + GLG IV D+ G  + VG+K       + + EA+ +  GL+    +S    +V  ESDC
Subjt:  YQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDC

Query:  LELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAA
         E++      +  R+E+      +R    +     F   PR+ N  A++LA+ A
Subjt:  LELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAA

XP_015382877.1 uncharacterized protein LOC107175700 [Citrus sinensis]1.1e-2824.73Show/hide
Query:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW
        +D +IW  DK GI+ VKS Y L +     +  S SD +  KS W+ +W      + KI+ W+   ++LP+  NL ++ +  +  C  C    E   H   
Subjt:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW

Query:  GCKVTIEIW--NQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPV
         C     +W   +F        +   +D  S+     L  K    ELE+   + W+IW  +N+++ +     P+     N ++R+I  +E   R      
Subjt:  GCKVTIEIW--NQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPV

Query:  DLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIA
              S  SQ+ W   P+ C+K+N  A+ N S  + GLG ++ +S G  +   ++       +  +EA+ +  G++S    +  P ++  ESD  E++ 
Subjt:  DLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIA

Query:  AFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSVQGLIPC
           + ++ ++E++     I+    +Q +    + PRS N +A+S+A+ A GF    F++++    I C
Subjt:  AFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSVQGLIPC

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]4.2e-3330.34Show/hide
Query:  AASSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTS
        A  ++DE++W  DK+G + VKS Y LAL        S ++ S     W  LW ++   + KI+ W+  N++LPSA NL K+ +   P C  C+ + E+ S
Subjt:  AASSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTS

Query:  HTFWGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWL---VEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRP
        H    CK   +IW Q   S F+     R +  S D +S L    ++L   +LE+   L WS W  +NK + D     P  I    +    +   +  ++P
Subjt:  HTFWGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWL---VEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRP

Query:  YQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDC
         QS + +   E    Q  W P PQN +K+N  A++N      G+G ++ DS G  +  G+          + EA+ +  GL+ L   +D   L+  ESDC
Subjt:  YQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDC

Query:  LELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATG
        LE++      +  RSE+     AI+         V  H PR  N  A+ LA+ A G
Subjt:  LELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATG

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]9.0e-2825.52Show/hide
Query:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW
        +D + W LDK G F V+SAY+LA   ++   +S S     +  W  +WK K   + KI+ WK  ++ L +  N RK+ + ++ +C++C +  E++ H   
Subjt:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW

Query:  GCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWS-WL---VEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPY-Q
         C     + +  + S    L     D  +  F + WL   +E L  +E E+  + +W  W ++N+I ++     P  +++  +   S      + R Y  
Subjt:  GCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWS-WL---VEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPY-Q

Query:  SPVDLGRCESFRSQVS------------------WNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSL
        + ++ G+    RS +S                  W        KLN   S++   G+GG+G I+ D+ GS ++   KS+         E +   EGL   
Subjt:  SPVDLGRCESFRSQVS------------------WNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSL

Query:  LTLSDRPPLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSVQGLIP
        L  + RP L+  E+DC+ L+        D SE+ +  + I+ L  ++   +     RS NGV++ LA  A          DS+ GL P
Subjt:  LTLSDRPPLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSVQGLIP

XP_042965942.1 uncharacterized protein LOC122299620 [Carya illinoinensis]1.2e-2725.48Show/hide
Query:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW
        +D  +WS ++ G F V+SAY L       +    S+ S L S+W+ +WK+K   + +I+ WK   D LP+  NL K+++D +P C LC +  E  SH   
Subjt:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW

Query:  GCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDL
         C   IE W   +P     LF  ++    +D  + +  K + +EL+   ++ WS W  +N+ ++D          +   I + +      +  + S    
Subjt:  GCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDL

Query:  GRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIAAF
           +  +    W+P P+   KLN   +      + G+G ++ D RG  I    K    I   + +E   +  GL+  L +      +  ESDC  L+   
Subjt:  GRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIAAF

Query:  TRD-EVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSV
         ++ + D S++ + T  ++ L     + + KH  R  N  A+ LAR A   + L  + +SV
Subjt:  TRD-EVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSV

TrEMBL top hitse value%identityAlignment
A0A2N9EF97 Reverse transcriptase domain-containing protein1.8e-2926.72Show/hide
Query:  SKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTF
        +KD +IW   K G++ V+S Y   L     +  S S PS++  VW+ +W ++   + +++TW+ L D LPS  NL K+ +  +P+C LC    E   H F
Subjt:  SKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTF

Query:  WGCKVTIEIWNQFIPSSFNFLFFCREDWTS----------LDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIF-----NQISRSI
        W C      W              +EDW S           D W+  V  LS+  +EV + + W IW  +NK+  +    K E++ IF      + S+S 
Subjt:  WGCKVTIEIWNQFIPSSFNFLFFCREDWTS----------LDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIF-----NQISRSI

Query:  HDLEGKKRPYQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRP
        +      R    PV           V W    Q C+K+N   +   ++   GLG ++ D  G  I    + +     ++ +EA      ++  + L  R 
Subjt:  HDLEGKKRPYQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRP

Query:  PLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAA
           E E D   +  A  R   +++      E  R L     +  F H  RS N VA++LAR A
Subjt:  PLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAA

A0A2N9F4S2 Reverse transcriptase domain-containing protein1.3e-2724.93Show/hide
Query:  DEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWG
        D++IWS +K G + V+SAY L    +  ++   SD    +  W+R+W ++   + + + W+   D LP+  N+R++NI     C  C+   E   H  W 
Subjt:  DEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWG

Query:  CKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDLG
        C V   +W     ++     F R   T LD  S L    + + + V A ++W +W  +NK L    R++ ES+     ++  +         Y S  +L 
Subjt:  CKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDLG

Query:  RC-ESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIAAF
         C  + +S+  W P   + +K+N  A+        G+G I+ D +G P+    K    ++ I   EA    E L+  + +     +VE E D L +  A 
Subjt:  RC-ESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIAAF

Query:  TRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCL
           +   +      +  RL+        F H  R  N  A+ LAR A  +  +
Subjt:  TRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFNCL

A0A2P6QWT3 Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein2.8e-2728.61Show/hide
Query:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW
        +D++IW  D KG F  KSAY LAL     +    S+ S    +W+++W  K   + KI+TW+  + ILP+   L+ +++  +  C  C  N E+  H   
Subjt:  KDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFW

Query:  GCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWL---VEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSP
         C    +++  F    F+ +F  RE   S+   SWL   +E LS  E  +  +L+WSIW  +N+ L   +R      Q++ Q+   +  L+         
Subjt:  GCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWL---VEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSP

Query:  VDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELI
        V        R + SW P P    K N   ++N  +  GG+G ++ DS GS +      ++ +    ++EA    E  +        P  +  ESDCL+L+
Subjt:  VDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELI

Query:  AAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSL
         A   DE D S      E IR L        F H  R SN  A+ L
Subjt:  AAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSL

A0A803P4T9 Uncharacterized protein4.8e-2725.28Show/hide
Query:  SSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHT
        + +D +IW     G + V+S +HLA +      +S SD   +   W+  W +   P+ +I+ WK L++ILP+A  L KK + ++  C LC  + ES  H 
Subjt:  SSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHT

Query:  FWGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKR--PYQS
         +GCK    IW     S F   F   ++  + D+   L   LS  + E+   ++W IWT +NK+++     +P +  I N   R + D    ++  P  +
Subjt:  FWGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKR--PYQS

Query:  PVD-----LGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAES
         +           + +    W P   N +K+N  A+ N+   + G+G ++ D  G+ +    K V   +    ++AK L+  L     L ++  +   E+
Subjt:  PVD-----LGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAES

Query:  DCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFN
        D L + +A      D S        +  L       +  H  RS+N  A+ LA+ A G +
Subjt:  DCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFN

A0A803QEG9 Uncharacterized protein8.8e-2925.54Show/hide
Query:  SKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTF
        ++D++IW     G F V+SAYHLA   S  +E   S  +     W+  W ++   + KI+ W+ ++D LP A +L ++ I ++  C +C++  EST H  
Subjt:  SKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTF

Query:  WGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQI-----------------SR
        +GCK    +W  F    FNF +       + D+  +L    +  E+E    ++W+IW  +NK+++  N  +   + +F  +                 + 
Subjt:  WGCKVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQI-----------------SR

Query:  SIHDLEGKKRPYQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSD
        +  D+ G   P Q P       +  S  SW P   +C+KLN+ A+  +S+   G+G ++ D+ GS        +   +    +EAK L+  L     L  
Subjt:  SIHDLEGKKRPYQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSD

Query:  RPPLVEAESDCLELIAAFT---RDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFN
        + P+   E+D L ++ A         + S++ S   ++   FP+  V    H  R++N  A+ LA+ A G +
Subjt:  RPPLVEAESDCLELIAAFT---RDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein1.9e-1221.83Show/hide
Query:  VKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGCKVTIEIW------
        ++S Y +A +   + E ++  P     V Q +WK+   P+ K + W+ +   L +   LR +NID++P+C  C   +E+  H  + C  T  +W      
Subjt:  VKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGCKVTIEIW------

Query:  --NQF-IPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKIL-----NDPNRSKPESIQIFNQISRSIHDLEGKK-RPYQSPVDL
          NQ+  PSSF       ED  +        +  ++ +  +   ++W +W  +N  L       P+    + IQ   +   +    E        +P+  
Subjt:  --NQF-IPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKIL-----NDPNRSKPESIQIFNQISRSIHDLEGKK-RPYQSPVDL

Query:  GRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVG
         R    R    WNP P+   K N  + +   +     GW + +  G  +  G
Subjt:  GRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVG

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.3e-1024.13Show/hide
Query:  CVLCRKNKESTSHTFWGCKVTIEIWN-QFIPSSFNFLFFCREDWTSLDFWS--WLVEKLSNKELEVTAI---------LIWSIWTLKNKIL-NDPNRSKP
        CV C  ++E+ +H  + C     +W    IP+      +   +WT   + +  W++    N E+E+  +         L+W +W  +N+++        P
Subjt:  CVLCRKNKESTSHTFWGCKVTIEIWN-QFIPSSFNFLFFCREDWTSLDFWS--WLVEKLSNKELEVTAI---------LIWSIWTLKNKIL-NDPNRSKP

Query:  E----SIQIFNQISRSIHDLEGKKRPYQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEA
        E    +++ F + S +  +LEGK    Q   +L         V W   P    K N+ A+W     R G+GWI+ +  G  +++G +++ +     VLEA
Subjt:  E----SIQIFNQISRSIHDLEGKKRPYQSPVDLGRCESFRSQVSWNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEA

Query:  KTLWEGLK-SLLTLSD-RPPLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFN
        +   E L+ ++LT+S      +  ESD   L+     D+   +   +  +  +LL   + V  F+  PR  N VA+ +AR +  F+
Subjt:  KTLWEGLK-SLLTLSD-RPPLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGFN

AT3G25270.1 Ribonuclease H-like superfamily protein1.9e-1221.36Show/hide
Query:  EASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGCKVTIEIWN-QFIP-SSFNFLFFCREDWT
        +  +  P     +  ++WK+K+ P+ K + WK L+  L +  NL++++I ++P C  C +  E++ H F+ C    ++W    IP           E   
Subjt:  EASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGCKVTIEIWN-QFIP-SSFNFLFFCREDWT

Query:  SLDFWSWLVEKLSNKELEVTAILIWSIWTL---KNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDLG-RCESFRSQ------VSWNPLPQN
         L     L   L+N++ ++  + IW +W L   +N+++      + +SI   N + R+ +D++  +        L  +  S R Q        W   P  
Subjt:  SLDFWSWLVEKLSNKELEVTAILIWSIWTL---KNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDLG-RCESFRSQ------VSWNPLPQN

Query:  CWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVG---------MKSVTQIWPIKVLEAKTLW-EGLKSLLTLSDRPPLVEAESDCLELIAAFTRDEVDRS
          K N   ++N        GW++ D  G  +Y+G           S+   +   ++  +  W +G + ++   D   + E  ++       F      R 
Subjt:  CWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVG---------MKSVTQIWPIKVLEAKTLW-EGLKSLLTLSDRPPLVEAESDCLELIAAFTRDEVDRS

Query:  EMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLAR
          K   EA           VFK  PR++N  A+ LA+
Subjt:  EMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLAR

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.9e-0535.71Show/hide
Query:  LWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGC
        +W +K  P+ K+  WK LN+ LP    L  +NI   P C  CR + E+ +H  + C
Subjt:  LWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGC

AT4G29090.1 Ribonuclease H-like superfamily protein3.0e-2122.89Show/hide
Query:  DEIIWSLDKKGIFKVKSAYHLALNC--SSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTF
        D   W     G + VKS Y +         S   VS+PS L  ++Q++WK ++ P+ + + WK L++ LP A  L  +++     C+ C   KE+ +H  
Subjt:  DEIIWSLDKKGIFKVKSAYHLALNC--SSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTF

Query:  WGC----------KVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEG
        + C           + I +  ++  S +  L++          W         K  ++   L+W +W  +N+++        + +     + R+  DLE 
Subjt:  WGC----------KVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEG

Query:  KKRPYQSPVDLGRCESFRSQVS-WNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVE
         +   ++     + +  RS    W P P    K N+ A+WN    R G+GW++ + +G   ++G +++ ++  +   E + +   + SL         V 
Subjt:  KKRPYQSPVDLGRCESFRSQVS-WNPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVE

Query:  AESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGF-NCLPFFVDSVQGLIPCW
         ESD   LI     DE+  S   +  +  RLL     V  F   PR  N +A  +AR +  F N  P     +  ++P W
Subjt:  AESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFPDQGVPVFKHCPRSSNGVANSLARAATGF-NCLPFFVDSVQGLIPCW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTATAGGGCAGCAAGTTCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCAATTGCTCATCAGT
CAGTGAGGCTTCTGTTTCAGACCCTAGTAAGCTGAAATCGGTTTGGCAGAGGCTGTGGAAAATTAAATCGATTCCAAGGGCCAAAATATACACCTGGAAATTTCTCAATG
ACATTCTTCCTAGTGCCCCCAACCTCCGAAAGAAAAATATTGATTCTAATCCCCTCTGTGTGTTGTGCAGGAAAAACAAGGAGTCTACTAGCCATACTTTTTGGGGATGC
AAGGTAACTATCGAAATATGGAACCAGTTTATTCCCTCCTCATTCAATTTTCTCTTTTTTTGCAGAGAAGATTGGACAAGCTTGGACTTTTGGAGCTGGTTGGTTGAGAA
GCTGAGCAATAAGGAGTTAGAGGTTACTGCCATCCTAATTTGGAGCATTTGGACTCTTAAGAACAAAATTCTCAATGATCCAAATAGATCAAAACCAGAATCGATACAGA
TATTCAATCAAATCAGCAGGAGCATTCATGATCTTGAAGGAAAAAAAAGGCCTTACCAGTCCCCCGTGGATTTGGGGAGATGCGAGAGCTTCCGAAGTCAAGTTTCTTGG
AATCCTCTGCCCCAGAACTGCTGGAAGCTAAATTCATATGCCTCTTGGAACGACTCAGCAGGCAGAGGTGGTTTAGGGTGGATCGTTCATGACTCCCGCGGGTCTCCTAT
CTACGTCGGAATGAAATCAGTTACTCAGATATGGCCCATTAAAGTGCTCGAAGCGAAGACGTTGTGGGAAGGGCTGAAATCATTGCTTACCTTGTCTGATAGACCGCCTC
TGGTTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCTGCCTTTACTAGAGATGAAGTTGATCGATCGGAGATGAAGAGCTGCACTGAAGCTATCCGTCTCCTGTTCCCT
GATCAGGGAGTGCCTGTCTTCAAGCACTGCCCTAGATCGTCAAATGGAGTTGCCAATTCCCTTGCTCGTGCTGCAACAGGATTCAATTGCCTCCCATTTTTTGTTGATTC
TGTGCAGGGTCTCATTCCATGCTGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTATAGGGCAGCAAGTTCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCAATTGCTCATCAGT
CAGTGAGGCTTCTGTTTCAGACCCTAGTAAGCTGAAATCGGTTTGGCAGAGGCTGTGGAAAATTAAATCGATTCCAAGGGCCAAAATATACACCTGGAAATTTCTCAATG
ACATTCTTCCTAGTGCCCCCAACCTCCGAAAGAAAAATATTGATTCTAATCCCCTCTGTGTGTTGTGCAGGAAAAACAAGGAGTCTACTAGCCATACTTTTTGGGGATGC
AAGGTAACTATCGAAATATGGAACCAGTTTATTCCCTCCTCATTCAATTTTCTCTTTTTTTGCAGAGAAGATTGGACAAGCTTGGACTTTTGGAGCTGGTTGGTTGAGAA
GCTGAGCAATAAGGAGTTAGAGGTTACTGCCATCCTAATTTGGAGCATTTGGACTCTTAAGAACAAAATTCTCAATGATCCAAATAGATCAAAACCAGAATCGATACAGA
TATTCAATCAAATCAGCAGGAGCATTCATGATCTTGAAGGAAAAAAAAGGCCTTACCAGTCCCCCGTGGATTTGGGGAGATGCGAGAGCTTCCGAAGTCAAGTTTCTTGG
AATCCTCTGCCCCAGAACTGCTGGAAGCTAAATTCATATGCCTCTTGGAACGACTCAGCAGGCAGAGGTGGTTTAGGGTGGATCGTTCATGACTCCCGCGGGTCTCCTAT
CTACGTCGGAATGAAATCAGTTACTCAGATATGGCCCATTAAAGTGCTCGAAGCGAAGACGTTGTGGGAAGGGCTGAAATCATTGCTTACCTTGTCTGATAGACCGCCTC
TGGTTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCTGCCTTTACTAGAGATGAAGTTGATCGATCGGAGATGAAGAGCTGCACTGAAGCTATCCGTCTCCTGTTCCCT
GATCAGGGAGTGCCTGTCTTCAAGCACTGCCCTAGATCGTCAAATGGAGTTGCCAATTCCCTTGCTCGTGCTGCAACAGGATTCAATTGCCTCCCATTTTTTGTTGATTC
TGTGCAGGGTCTCATTCCATGCTGGAAGTAG
Protein sequenceShow/hide protein sequence
MIYRAASSKDEIIWSLDKKGIFKVKSAYHLALNCSSVSEASVSDPSKLKSVWQRLWKIKSIPRAKIYTWKFLNDILPSAPNLRKKNIDSNPLCVLCRKNKESTSHTFWGC
KVTIEIWNQFIPSSFNFLFFCREDWTSLDFWSWLVEKLSNKELEVTAILIWSIWTLKNKILNDPNRSKPESIQIFNQISRSIHDLEGKKRPYQSPVDLGRCESFRSQVSW
NPLPQNCWKLNSYASWNDSAGRGGLGWIVHDSRGSPIYVGMKSVTQIWPIKVLEAKTLWEGLKSLLTLSDRPPLVEAESDCLELIAAFTRDEVDRSEMKSCTEAIRLLFP
DQGVPVFKHCPRSSNGVANSLARAATGFNCLPFFVDSVQGLIPCWK