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Lag0001145 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001145
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr4:25316825..25329131
RNA-Seq ExpressionLag0001145
SyntenyLag0001145
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042022.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-1554.55Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYKVDLQEETRHLRHGILLSKELCPETPQEVEDMRHMPYA
        +E  LS+++ MNDVD DQ IK MDLEM+S++FNS+ +LV+L +GV PI             RHG+ LSKE CP+TPQEVED+R +PYA
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYKVDLQEETRHLRHGILLSKELCPETPQEVEDMRHMPYA

KAA0048172.1 gag/pol protein [Cucumis melo var. makuwa]2.4e-1651.02Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG----YKVDL------QEETRHLRHGILLSKELCPETPQEVEDMRHMPYA
        +E  LS+++ MNDVD DQ +K MDLEM  ++FNS++ L+NLL+GV PIG    YK          ++  H +H + LSKE CP T QEVEDMRH+PYA
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG----YKVDL------QEETRHLRHGILLSKELCPETPQEVEDMRHMPYA

KAA0054064.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-1551.55Show/hide
Query:  LSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG------YKVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPYA
        LS ++ MNDVD DQ +K MDLEM+S++FNS+++LV+L +GV PIG       K D   + +  +       HG+ LSKE CP+TPQEVEDMRH+PYA
Subjt:  LSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG------YKVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPYA

KAA0062799.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-1442.02Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYK------------------------------VDLQEETRHL-RHGILLSK
        +E  L+F+K + DVD D+ IK M+LE++S++FNS++DLV+ LDGV PIG K                              VD +E    +  HG+ LSK
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYK------------------------------VDLQEETRHL-RHGILLSK

Query:  ELCPETPQEVEDMRHMPYA
        E CP+TPQ+VE+MRH+PYA
Subjt:  ELCPETPQEVEDMRHMPYA

KAA0067075.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-1448.51Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGY------KVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPY
        +E  LS+++ MNDV  DQ +K MDLEM+S++FNS++ LV+L +GV PIGY      K D   + +  +       HG+ LSKE CP+TPQEVEDMR + Y
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGY------KVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPY

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A5A7TF12 Gag/pol protein9.9e-1654.55Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYKVDLQEETRHLRHGILLSKELCPETPQEVEDMRHMPYA
        +E  LS+++ MNDVD DQ IK MDLEM+S++FNS+ +LV+L +GV PI             RHG+ LSKE CP+TPQEVED+R +PYA
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYKVDLQEETRHLRHGILLSKELCPETPQEVEDMRHMPYA

A0A5A7UFT7 Gag/pol protein7.6e-1651.55Show/hide
Query:  LSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG------YKVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPYA
        LS ++ MNDVD DQ +K MDLEM+S++FNS+++LV+L +GV PIG       K D   + +  +       HG+ LSKE CP+TPQEVEDMRH+PYA
Subjt:  LSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG------YKVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPYA

A0A5D3BE74 Gag/pol protein8.3e-1542.02Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYK------------------------------VDLQEETRHL-RHGILLSK
        +E  L+F+K + DVD D+ IK M+LE++S++FNS++DLV+ LDGV PIG K                              VD +E    +  HG+ LSK
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGYK------------------------------VDLQEETRHL-RHGILLSK

Query:  ELCPETPQEVEDMRHMPYA
        E CP+TPQ+VE+MRH+PYA
Subjt:  ELCPETPQEVEDMRHMPYA

A0A5D3CA62 Gag/pol protein1.2e-1651.02Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG----YKVDL------QEETRHLRHGILLSKELCPETPQEVEDMRHMPYA
        +E  LS+++ MNDVD DQ +K MDLEM  ++FNS++ L+NLL+GV PIG    YK          ++  H +H + LSKE CP T QEVEDMRH+PYA
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIG----YKVDL------QEETRHLRHGILLSKELCPETPQEVEDMRHMPYA

A0A5D3DS77 Gag/pol protein6.4e-1548.51Show/hide
Query:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGY------KVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPY
        +E  LS+++ MNDV  DQ +K MDLEM+S++FNS++ LV+L +GV PIGY      K D   + +  +       HG+ LSKE CP+TPQEVEDMR + Y
Subjt:  LEGSLSFRKKMNDVDNDQRIKVMDLEMKSLHFNSIFDLVNLLDGVTPIGY------KVDLQEETRHLR-------HGILLSKELCPETPQEVEDMRHMPY

Query:  A
        A
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCTGCACGAGGGCAATTATGTCCCTTCGAAGGTCAACACTACTACATCCTCGATCCTAATCCTAAAGGTAAAGCCCGGGAGCCTTGTTGGAAATAAAAAAAAAGC
GGCGGCACGGTGGCGGTACGACAGTGGCGGCGACGACAGTGGTGGCGGCAACGGCGGTACGGCAGTGAGTGGCGGCGTCGGTACGACGGTGAGTGGCGGCGGCGGTACGG
TGCTCTTGAGATATTCGAAGGAGCTTAGGACGAAAGTTGAAAACTTGTTAGAGGGTTCATTATCTTTTAGAAAGAAAATGAATGATGTTGACAACGATCAGAGGATTAAA
GTCATGGACTTGGAAATGAAGTCTTTGCATTTCAATTCCATCTTCGATCTTGTAAATTTGCTTGATGGGGTAACACCTATAGGTTACAAAGTGGATTTACAAGAGGAAAC
GAGACATTTAAGGCATGGAATTCTTTTGTCTAAAGAACTGTGTCCTGAGACACCTCAAGAAGTTGAGGACATGAGACATATGCCCTATGCAGTAGGGTTACGTATTGATC
CAAGGCGTCCATGTGGGAGAAATGCGAGCGGGGGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGAAT
TCAGTCCCACAACTGAGTTCCCAAACTCAGAGGATAACAGGGCAAATCTTGTGGTGGTGTCCCAAGATTTCATTTTTGGTCCCTGACATTCAAGAAGGCGTTCTTGAAGA
ATTCAGAGTCGTCAGACGACGGTGCCACTTGTCTCGTTTGCTTTTCCTTGCAAGGAATAAGCTCATGGCAACAGTTGCAAATAGGTGGGATGACTCTCAGATTTTGATCT
GGAGAAACTTAAGAGCCAAAGAGCCCTTGGAGCTTGTACATTTGGATCCTTGTGGTCCAGACGTAAAGATTGTTTACGTTCCTTTAAATTTTGGGGTGTCCAGCACTTGT
GCTTGTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCCTGCACGAGGGCAATTATGTCCCTTCGAAGGTCAACACTACTACATCCTCGATCCTAATCCTAAAGGTAAAGCCCGGGAGCCTTGTTGGAAATAAAAAAAAAGC
GGCGGCACGGTGGCGGTACGACAGTGGCGGCGACGACAGTGGTGGCGGCAACGGCGGTACGGCAGTGAGTGGCGGCGTCGGTACGACGGTGAGTGGCGGCGGCGGTACGG
TGCTCTTGAGATATTCGAAGGAGCTTAGGACGAAAGTTGAAAACTTGTTAGAGGGTTCATTATCTTTTAGAAAGAAAATGAATGATGTTGACAACGATCAGAGGATTAAA
GTCATGGACTTGGAAATGAAGTCTTTGCATTTCAATTCCATCTTCGATCTTGTAAATTTGCTTGATGGGGTAACACCTATAGGTTACAAAGTGGATTTACAAGAGGAAAC
GAGACATTTAAGGCATGGAATTCTTTTGTCTAAAGAACTGTGTCCTGAGACACCTCAAGAAGTTGAGGACATGAGACATATGCCCTATGCAGTAGGGTTACGTATTGATC
CAAGGCGTCCATGTGGGAGAAATGCGAGCGGGGGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGAAT
TCAGTCCCACAACTGAGTTCCCAAACTCAGAGGATAACAGGGCAAATCTTGTGGTGGTGTCCCAAGATTTCATTTTTGGTCCCTGACATTCAAGAAGGCGTTCTTGAAGA
ATTCAGAGTCGTCAGACGACGGTGCCACTTGTCTCGTTTGCTTTTCCTTGCAAGGAATAAGCTCATGGCAACAGTTGCAAATAGGTGGGATGACTCTCAGATTTTGATCT
GGAGAAACTTAAGAGCCAAAGAGCCCTTGGAGCTTGTACATTTGGATCCTTGTGGTCCAGACGTAAAGATTGTTTACGTTCCTTTAAATTTTGGGGTGTCCAGCACTTGT
GCTTGTGACTAA
Protein sequenceShow/hide protein sequence
MRLHEGNYVPSKVNTTTSSILILKVKPGSLVGNKKKAAARWRYDSGGDDSGGGNGGTAVSGGVGTTVSGGGGTVLLRYSKELRTKVENLLEGSLSFRKKMNDVDNDQRIK
VMDLEMKSLHFNSIFDLVNLLDGVTPIGYKVDLQEETRHLRHGILLSKELCPETPQEVEDMRHMPYAVGLRIDPRRPCGRNASGGLEQRDPALSLAREGLSVYWLDHKQN
SVPQLSSQTQRITGQILWWCPKISFLVPDIQEGVLEEFRVVRRRCHLSRLLFLARNKLMATVANRWDDSQILIWRNLRAKEPLELVHLDPCGPDVKIVYVPLNFGVSSTC
ACD