; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001146 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001146
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description1-deoxy-D-xylulose 5-phosphate synthase family protein
Genome locationchr4:25347084..25347488
RNA-Seq ExpressionLag0001146
SyntenyLag0001146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]8.2e-0846.38Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEE
        +PT+HDST+S ER+ +LY I++G +IN+G +I +EI  C  +  GKLFF  LIT+  +    VP  N+E
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]5.7e-0936.36Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL---------QQNNAQ
        +PTTH  T+S +R++LLY+++ G  IN+G +I  EI +C  +++G LFF SLITQL +  +     NEE+      ID   + ++         QQ +  
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL---------QQNNAQ

Query:  RKDKASASQA
        R   AS+S+A
Subjt:  RKDKASASQA

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]6.3e-0836.63Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS
        +PTTH  T+S ERV+LLY+++ G  IN+G II  EI +   +++G LFF SLIT++    +     NEE+      ID   + ++ Q+  A+   + S+S
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS

Query:  Q
        +
Subjt:  Q

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]8.2e-0833.93Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS
        +PTTH   +S E V+LLY+++ G  IN+G II  EI +C  ++ G LFF SLIT++ +  +     NEE+      ID   + ++ Q+  A+   ++S+S
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS

Query:  QATPSLGLTPTS
        + + +   + TS
Subjt:  QATPSLGLTPTS

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.0e-0936.94Show/hide
Query:  PTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIV-------KIVPRKNEERHFYKPTIDFPLIGKLQQNNAQRKD
        PTTHDS+ISVE+++LLY ++ G  IN+G ++ + IL C ++R GKLFF SLI +L            +V ++ EE    K TID   + KL++ + + ++
Subjt:  PTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIV-------KIVPRKNEERHFYKPTIDFPLIGKLQQNNAQRKD

Query:  KASASQATPSL
            ++A   L
Subjt:  KASASQATPSL

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein2.8e-0936.36Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL---------QQNNAQ
        +PTTH  T+S +R++LLY+++ G  IN+G +I  EI +C  +++G LFF SLITQL +  +     NEE+      ID   + ++         QQ +  
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL---------QQNNAQ

Query:  RKDKASASQA
        R   AS+S+A
Subjt:  RKDKASASQA

A0A2P5CPE8 Uncharacterized protein3.0e-0836.63Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS
        +PTTH  T+S ERV+LLY+++ G  IN+G II  EI +   +++G LFF SLIT++    +     NEE+      ID   + ++ Q+  A+   + S+S
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS

Query:  Q
        +
Subjt:  Q

A0A2P5CXU3 Uncharacterized protein (Fragment)4.0e-0833.93Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS
        +PTTH   +S E V+LLY+++ G  IN+G II  EI +C  ++ G LFF SLIT++ +  +     NEE+      ID   + ++ Q+  A+   ++S+S
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKL-QQNNAQRKDKASAS

Query:  QATPSLGLTPTS
        + + +   + TS
Subjt:  QATPSLGLTPTS

A0A7J6FZ22 Uncharacterized protein4.0e-0846.38Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEE
        +PT+HDST+S ER+ +LY I++G +IN+G +I +EI  C  +  GKLFF  LIT+  +    VP  N+E
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEE

A0A803Q715 Uncharacterized protein4.0e-0846.38Show/hide
Query:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEE
        +PT+HDST+S ER+ +LY I++G +IN+G +I +EI  C  +  GKLFF  LIT+  +    VP  N+E
Subjt:  MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACCACCCATGACAGCACGATTTCAGTAGAGAGGGTCATGCTTCTCTACAATATAATGCAGGGGTTGGAAATTAATATTGGGAGCATCATTAGAGAGGAGATTCT
GTCCTGTGGAAGAAAGCGAGCGGGGAAGCTATTCTTTGGGTCTCTCATAACTCAACTTTATCAGATAGTCAAGATTGTTCCTAGAAAGAATGAGGAACGACATTTTTACA
AGCCTACCATTGACTTTCCTCTGATAGGGAAGCTGCAGCAGAACAATGCACAAAGAAAAGATAAAGCTTCTGCCTCTCAAGCTACTCCTTCTCTGGGGCTGACACCTACT
TCACCTCCAACACATAGTCCTATTTCAGGGCCTACACCATCAATCAAGGTCCTTGCATTTGCTTTTGCCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCACCACCCATGACAGCACGATTTCAGTAGAGAGGGTCATGCTTCTCTACAATATAATGCAGGGGTTGGAAATTAATATTGGGAGCATCATTAGAGAGGAGATTCT
GTCCTGTGGAAGAAAGCGAGCGGGGAAGCTATTCTTTGGGTCTCTCATAACTCAACTTTATCAGATAGTCAAGATTGTTCCTAGAAAGAATGAGGAACGACATTTTTACA
AGCCTACCATTGACTTTCCTCTGATAGGGAAGCTGCAGCAGAACAATGCACAAAGAAAAGATAAAGCTTCTGCCTCTCAAGCTACTCCTTCTCTGGGGCTGACACCTACT
TCACCTCCAACACATAGTCCTATTTCAGGGCCTACACCATCAATCAAGGTCCTTGCATTTGCTTTTGCCAGCTAG
Protein sequenceShow/hide protein sequence
MPTTHDSTISVERVMLLYNIMQGLEINIGSIIREEILSCGRKRAGKLFFGSLITQLYQIVKIVPRKNEERHFYKPTIDFPLIGKLQQNNAQRKDKASASQATPSLGLTPT
SPPTHSPISGPTPSIKVLAFAFAS