; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001159 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001159
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:25766021..25767233
RNA-Seq ExpressionLag0001159
SyntenyLag0001159
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0035556 - intracellular signal transduction (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004435 - phosphatidylinositol phospholipase C activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001711 - Phospholipase C, phosphatidylinositol-specific, Y domain
IPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TKR86343.1 hypothetical protein D5086_0000239010 [Populus alba]1.5e-5141.61Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V S          WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

TKR89927.1 hypothetical protein D5086_0000238200 [Populus alba]1.2e-5141.29Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT  G    L+++R+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

TKS02608.1 hypothetical protein D5086_0000161380 [Populus alba]3.1e-5241.94Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG+V + +G   K  GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

TKS09800.1 hypothetical protein D5086_0000089010 [Populus alba]2.4e-5241.94Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG+V + +G   K  GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

TKS13843.1 hypothetical protein D5086_0000049350 [Populus alba]5.3e-5241.61Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG++ + +G      GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D GY   F+
Subjt:  ADDGYMSSFS

TrEMBL top hitse value%identityAlignment
A0A4U5NTA0 CCHC-type domain-containing protein7.4e-5241.61Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V S          WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

A0A4U5P1P0 CCHC-type domain-containing protein5.7e-5241.29Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT  G    L+++R+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

A0A4U5PY83 CCHC-type domain-containing protein1.5e-5241.94Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG+V + +G   K  GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

A0A4U5QGR0 Uncharacterized protein1.1e-5241.94Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG+V + +G   K  GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D G+   F+
Subjt:  ADDGYMSSFS

A0A4U5QS59 CCHC-type domain-containing protein2.6e-5241.61Show/hide
Query:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS
        + LS  VA  V  E +  KLME+L+  YEKPSANNKV+++KK FN++M E  SV  ++N   T+ NQL SV+IEF DE+ A+ LL SL  SWE M+T VS
Subjt:  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVS

Query:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN
        NS G + LK+ ++ DL +AEE+RR+ S + S+ GSAL + T+G+  D+        S   S+ K+  R +VEC+ C K GHF   C K K+ +     A 
Subjt:  NSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEAN

Query:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL
           V++ ++  V+S          WILDS AS H      +  ++ GG HG++ + +G      GIGDV +KT  G    L++VR+VP +K  LIS+G+L
Subjt:  I--VEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKL

Query:  ADDGYMSSFS
         D GY   F+
Subjt:  ADDGYMSSFS

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-3134.17Show/hide
Query:  LSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVSNS
        LS DV + +  E TA  +   L + Y   +  NK+Y+ K+ + + MSE  +  S++N    LI QL ++ ++  +E  AI LL SL  S++ + T + + 
Subjt:  LSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVSNS

Query:  TGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSALVMT-KGKDKVDEDNEPSSSRKKWKGRNEVE-----CYYCHKKGHFKYQC---RKFK-EDQKRKP
         G  T++  +V   L + E++R++  N+    G AL+   +G+      N    S  + K +N  +     CY C++ GHFK  C   RK K E   +K 
Subjt:  TGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSALVMT-KGKDKVDEDNEPSSSRKKWKGRNEVE-----CYYCHKKGHFKYQC---RKFK-EDQKRKP

Query:  EANIV------EEVVLACVESD--TKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIK
        + N        + VVL   E +     S   S W++D+AAS H    R LF  +  G  G V+MGN   SK  GIGD+ +KT  G  LVL+DVR+VP+++
Subjt:  EANIV------EEVVLACVESD--TKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIK

Query:  MNLISIGKLADDGYMSSFS
        MNLIS   L  DGY S F+
Subjt:  MNLISIGKLADDGYMSSFS

P25601 Putative transposon Ty5-1 protein YCL075W3.5e-0636.78Show/hide
Query:  CVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
        C+ S T  +  SS WI D+  + H+  DRS+F+SFT         G G +    G G V++     G + L DV YVP++ +NLIS+
Subjt:  CVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.6e-0522.84Show/hide
Query:  LSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETM-------
        +SM V   V+  TTA ++ E+L   Y  PS  + V  ++           +++ Y+  + T  +QL  +      +    ++L +L + ++ +       
Subjt:  LSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETM-------

Query:  -----KTPVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALVMTKGKDKVDEDNEPSSSRKKWK--------GRNEV-----ECYYCHKKGHFK
              T +     N+  K   V    +        S++ +T  +        ++ D  N  ++S K W+          N+      +C  C  +GH  
Subjt:  -----KTPVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALVMTKGKDKVDEDNEPSSSRKKWK--------GRNEV-----ECYYCHKKGHFK

Query:  YQCRKFK----EDQKRKPEANIVEEVVLACVESDTKYSNHSSGWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGK
         +C + +        ++P +        A +   + YS  S+ W+LDS A+ HI SD    SL   +TGG    V + +G T      G  SL T+    
Subjt:  YQCRKFK----EDQKRKPEANIVEEVVLACVESDTKYSNHSSGWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGK

Query:  LVLRDVRYVPNIKMNLISIGKLAD
        L L ++ YVPNI  NLIS+ +L +
Subjt:  LVLRDVRYVPNIKMNLISIGKLAD

Arabidopsis top hitse value%identityAlignment
AT3G20980.1 Gag-Pol-related retrotransposon family protein2.7e-0630.28Show/hide
Query:  NIVEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKT-----RGIGDVSLKTECGGKLVLRDVRYVPNIKMNLIS
        +++ EV     E  +KY+ H + W++ S  S H+      FT+        V+  +G  S+T      GIGDV+  T  G K  +++V YVP I+ N +S
Subjt:  NIVEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKT-----RGIGDVSLKTECGGKLVLRDVRYVPNIKMNLIS

Query:  IGKLADDGY
        + +L  +G+
Subjt:  IGKLADDGY

AT3G21000.1 Gag-Pol-related retrotransposon family protein1.4e-0721.15Show/hide
Query:  KKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALVMT
        K+  +++M ++ S +SY+++   ++ +L   K+E SD      + T+L  S++ + + +      + +    + +       R   S+ E  +   L   
Subjt:  KKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALVMT

Query:  KGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEANIVEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGG
               +D    S  +KW       C  C+K  H +  C+      K + E  IV +  L  V +    +     WI+   A +++      FT+    
Subjt:  KGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEANIVEEVVLACVESDTKYSNHSSGWILDSAASVHIASDRSLFTSFTGG

Query:  HHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMSS
            V   +G      G GDV ++ + G K  +R+V +VP +  N++S GK+    Y  S
Subjt:  HHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTGTCGATGGATGTGGCAAGTCTAGTAGCCCATGAGACAACTGCGGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGT
CTACGTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGAGGCTTCTGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCAGTTAAAATCTGTTAAGATAG
AATTTTCTGATGAGGTGTATGCTATTCAGTTGTTAACGTCTTTACTTGATAGTTGGGAAACGATGAAGACACCAGTGTCTAATTCGACTGGAAATAACACTTTAAAATTT
TCAGAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAGCTTTGGTTATGACTAAAGGTAAAGATAAGGTTGA
TGAAGATAATGAACCGAGTAGCAGTAGGAAAAAGTGGAAAGGTAGGAATGAGGTAGAATGTTATTACTGCCATAAGAAAGGTCACTTCAAGTATCAGTGTAGGAAATTTA
AAGAGGATCAGAAAAGAAAGCCAGAGGCAAATATAGTGGAAGAGGTTGTCTTAGCTTGTGTTGAGAGTGACACAAAGTATAGTAACCACTCATCAGGTTGGATATTAGAC
AGTGCAGCTTCTGTTCACATAGCTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGG
GATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGGTAAATTGGTACTGCGAGATGTCAGGTACGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAGTTGGCAG
ATGATGGTTACATGTCCTCCTTCTCTGTAAACTCTAACTTTGGTGAGTTTTCATCAAGTAGGAGCGAGTACATACCTTGCCCTCCGGGCTCTTGCTGTGCCTCTCGAACT
GCAGCTTTTCGCTTTCTACCTGACTCTCCTCCTGAGGTTCCTCCTAAAATTGTTCGAATCTCGAGCGGTGGGTTGGCACCACCCTTACCTTGGTCTGCTGGTAGTGGCCT
CTTGCTTCTGTCATTCCCCATGAATTCATTGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTGTCGATGGATGTGGCAAGTCTAGTAGCCCATGAGACAACTGCGGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGT
CTACGTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGAGGCTTCTGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCAGTTAAAATCTGTTAAGATAG
AATTTTCTGATGAGGTGTATGCTATTCAGTTGTTAACGTCTTTACTTGATAGTTGGGAAACGATGAAGACACCAGTGTCTAATTCGACTGGAAATAACACTTTAAAATTT
TCAGAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAGCTTTGGTTATGACTAAAGGTAAAGATAAGGTTGA
TGAAGATAATGAACCGAGTAGCAGTAGGAAAAAGTGGAAAGGTAGGAATGAGGTAGAATGTTATTACTGCCATAAGAAAGGTCACTTCAAGTATCAGTGTAGGAAATTTA
AAGAGGATCAGAAAAGAAAGCCAGAGGCAAATATAGTGGAAGAGGTTGTCTTAGCTTGTGTTGAGAGTGACACAAAGTATAGTAACCACTCATCAGGTTGGATATTAGAC
AGTGCAGCTTCTGTTCACATAGCTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGG
GATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGGTAAATTGGTACTGCGAGATGTCAGGTACGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAGTTGGCAG
ATGATGGTTACATGTCCTCCTTCTCTGTAAACTCTAACTTTGGTGAGTTTTCATCAAGTAGGAGCGAGTACATACCTTGCCCTCCGGGCTCTTGCTGTGCCTCTCGAACT
GCAGCTTTTCGCTTTCTACCTGACTCTCCTCCTGAGGTTCCTCCTAAAATTGTTCGAATCTCGAGCGGTGGGTTGGCACCACCCTTACCTTGGTCTGCTGGTAGTGGCCT
CTTGCTTCTGTCATTCCCCATGAATTCATTGAGGTAA
Protein sequenceShow/hide protein sequence
MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYVVKKFFNMQMSEEASVNSYINEVTTLINQLKSVKIEFSDEVYAIQLLTSLLDSWETMKTPVSNSTGNNTLKF
SEVCDLAIAEEIRRQGSNKESTVGSALVMTKGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKYQCRKFKEDQKRKPEANIVEEVVLACVESDTKYSNHSSGWILD
SAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMSSFSVNSNFGEFSSSRSEYIPCPPGSCCASRT
AAFRFLPDSPPEVPPKIVRISSGGLAPPLPWSAGSGLLLLSFPMNSLR