; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001160 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001160
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:25767407..25768321
RNA-Seq ExpressionLag0001160
SyntenyLag0001160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]9.4e-3038.14Show/hide
Query:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---
        M+ +VP KFK+P   +YD   DP  HLD    W D +G  EA RCR F+  LT   R WF ++ RKSI SF+ELAR+FVTQF G  +R +P   LLT   
Subjt:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---

Query:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEG
                           VEG  D V L   ISG++DE+L+ S  +    T+ E  +RAQ Y+S  EL+ SK++ +  +    + R R    KRH +  
Subjt:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEG

Query:  RGQIQLSANGRGRPEAKEPQGRAEPKASFDKYTPLT
          + + S +G+GR   ++PQ +      F+KYTP T
Subjt:  RGQIQLSANGRGRPEAKEPQGRAEPKASFDKYTPLT

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.4e-2739.5Show/hide
Query:  DEIMEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT
        +EIM+ +VP KFK+P   Q+D   D   HLDA + WMD +G +EA +CR F+  L+  AR WF ++ R SI SF+ LA++FVTQF+G  SR +P   LLT
Subjt:  DEIMEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT

Query:  ----------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ
                              VEG  + V+L A +S ++DE L  S  +  P T+ E ++RAQ+Y+SA E   SK+E         SD++RE  G + Q
Subjt:  ----------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]6.1e-2940.71Show/hide
Query:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---
        M+ +   KFK+P   +YD   DP  HLDA + W D +   EA RCR F+  LT  AR WF ++ R SI SF+ELA +FVTQF+G   + KP   LLT   
Subjt:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---

Query:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLR-SKQEERESWRVAMSDRHREDRG-KRHQV
                           VEG  D VAL A +SG++DERL+ S  +  P T++E ++RAQ+Y+SA EL+  S+  ERE    A     RE RG KRH  
Subjt:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLR-SKQEERESWRVAMSDRHREDRG-KRHQV

Query:  EGRGQIQLSANGRGRPEAKEPQGRAE
          R   + S +G GR   ++PQ + E
Subjt:  EGRGQIQLSANGRGRPEAKEPQGRAE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]7.0e-3336.66Show/hide
Query:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ
        TR  D +K + + KS A      +HD    E  S    K  D  ++S+KR  ++    D+E L+ +  S FT+EIM  +VP KFK+P   Q+D   DP  
Subjt:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ

Query:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT----------------------VEGYDD
        HLDA + WMD +G +EA RCR F+  L   AR WF ++ R SI SF+ LAR+FVTQF+G   R +P   LLT                      VEG  D
Subjt:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT----------------------VEGYDD

Query:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEGRGQIQLSANGRGRPEAKEPQGRAEP
         V+L A +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E         +D  RE  G + Q               R E ++   + +P
Subjt:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEGRGQIQLSANGRGRPEAKEPQGRAEP

Query:  KASFDKYTPLT
           F+KYTP T
Subjt:  KASFDKYTPLT

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]6.5e-3137.5Show/hide
Query:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ
        TR  D +K++ + KS A      +HD    E  S    K  D  ++S+KR   +    D+E L+G+  S FT+EIM  +VP KFK+P    +D   +P  
Subjt:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ

Query:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLTV----------------------EGYDD
        HLDA + WMD +G ++A RCR F+  L   AR WF ++ R SI SF+ LAR+F+TQF+G   R +P   LLT+                      EG  D
Subjt:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLTV----------------------EGYDD

Query:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ
         V+L A +SG++DE L  S E+  P T+ E ++RAQRY+SA E   SK+E         +D+ RE  G + Q
Subjt:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166194.6e-3038.14Show/hide
Query:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---
        M+ +VP KFK+P   +YD   DP  HLD    W D +G  EA RCR F+  LT   R WF ++ RKSI SF+ELAR+FVTQF G  +R +P   LLT   
Subjt:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---

Query:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEG
                           VEG  D V L   ISG++DE+L+ S  +    T+ E  +RAQ Y+S  EL+ SK++ +  +    + R R    KRH +  
Subjt:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEG

Query:  RGQIQLSANGRGRPEAKEPQGRAEPKASFDKYTPLT
          + + S +G+GR   ++PQ +      F+KYTP T
Subjt:  RGQIQLSANGRGRPEAKEPQGRAEPKASFDKYTPLT

A0A6J1D7D2 uncharacterized protein LOC1110183071.6e-2739.5Show/hide
Query:  DEIMEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT
        +EIM+ +VP KFK+P   Q+D   D   HLDA + WMD +G +EA +CR F+  L+  AR WF ++ R SI SF+ LA++FVTQF+G  SR +P   LLT
Subjt:  DEIMEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT

Query:  ----------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ
                              VEG  + V+L A +S ++DE L  S  +  P T+ E ++RAQ+Y+SA E   SK+E         SD++RE  G + Q
Subjt:  ----------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ

A0A6J1DWY0 uncharacterized protein LOC1110252933.4e-3336.66Show/hide
Query:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ
        TR  D +K + + KS A      +HD    E  S    K  D  ++S+KR  ++    D+E L+ +  S FT+EIM  +VP KFK+P   Q+D   DP  
Subjt:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ

Query:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT----------------------VEGYDD
        HLDA + WMD +G +EA RCR F+  L   AR WF ++ R SI SF+ LAR+FVTQF+G   R +P   LLT                      VEG  D
Subjt:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT----------------------VEGYDD

Query:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEGRGQIQLSANGRGRPEAKEPQGRAEP
         V+L A +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E         +D  RE  G + Q               R E ++   + +P
Subjt:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQVEGRGQIQLSANGRGRPEAKEPQGRAEP

Query:  KASFDKYTPLT
           F+KYTP T
Subjt:  KASFDKYTPLT

A0A6J1DZ49 uncharacterized protein LOC1110248513.0e-2940.71Show/hide
Query:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---
        M+ +   KFK+P   +YD   DP  HLDA + W D +   EA RCR F+  LT  AR WF ++ R SI SF+ELA +FVTQF+G   + KP   LLT   
Subjt:  MEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLT---

Query:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLR-SKQEERESWRVAMSDRHREDRG-KRHQV
                           VEG  D VAL A +SG++DERL+ S  +  P T++E ++RAQ+Y+SA EL+  S+  ERE    A     RE RG KRH  
Subjt:  -------------------VEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLR-SKQEERESWRVAMSDRHREDRG-KRHQV

Query:  EGRGQIQLSANGRGRPEAKEPQGRAE
          R   + S +G GR   ++PQ + E
Subjt:  EGRGQIQLSANGRGRPEAKEPQGRAE

A0A6J1E1E7 uncharacterized protein LOC1110255483.2e-3137.5Show/hide
Query:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ
        TR  D +K++ + KS A      +HD    E  S    K  D  ++S+KR   +    D+E L+G+  S FT+EIM  +VP KFK+P    +D   +P  
Subjt:  TRNNDRKKLEARAKSEA------EHDKTKRE--SSKWVKEEDSYQTSQKRAENE----DIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQ

Query:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLTV----------------------EGYDD
        HLDA + WMD +G ++A RCR F+  L   AR WF ++ R SI SF+ LAR+F+TQF+G   R +P   LLT+                      EG  D
Subjt:  HLDANQTWMDFHGANEATRCRAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLTV----------------------EGYDD

Query:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ
         V+L A +SG++DE L  S E+  P T+ E ++RAQRY+SA E   SK+E         +D+ RE  G + Q
Subjt:  GVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEERESWRVAMSDRHREDRGKRHQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACACAAGGAATAATGACAGGAAAAAGTTGGAGGCTCGGGCAAAGTCCGAGGCCGAGCACGACAAAACGAAACGAGAGTCATCCAAGTGGGTGAAAGAGGAAGACAG
TTACCAAACCTCCCAGAAGAGGGCGGAGAACGAGGACATAGAAGGGTTGATCGGGGAGGTGGGGTCAGTCTTCACCGACGAAATAATGGAAGGAGAGGTGCCGCACAAAT
TCAAAATACCAAACTTCCCGCAGTATGACAGGAAGAAGGATCCGAAGCAACACTTAGACGCAAACCAAACCTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTGC
CGAGCCTTTGCACTAATACTCACAGATTTAGCCAGGCAATGGTTTGGCAAGATACCCCGAAAGTCAATTGGTTCGTTCAGAGAGCTGGCCCGGTCGTTTGTTACGCAATT
TCTAGGAGCCCATAGCCGACAGAAGCCTCATATCAACCTGCTGACAGTGGAGGGTTACGACGATGGAGTTGCCTTGGCTGCTGTGATTTCAGGTTTACAGGATGAGAGAC
TGCTCAACTCAATCGAAGAGAGCCAACCGTGGACGTACGTGGAGTTTATGACCCGAGCGCAAAGATACATAAGCGCCGAGGAACTATTGAGATCCAAACAGGAAGAAAGA
GAGAGCTGGAGAGTGGCGATGTCAGATCGACATCGAGAAGACAGAGGAAAAAGGCACCAGGTCGAGGGAAGAGGTCAAATCCAACTTTCGGCCAATGGCCGAGGCCGACC
AGAGGCTAAGGAGCCGCAGGGCCGGGCGGAGCCAAAAGCTAGCTTCGACAAGTATACACCGCTAACAGCTTCGCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACACAAGGAATAATGACAGGAAAAAGTTGGAGGCTCGGGCAAAGTCCGAGGCCGAGCACGACAAAACGAAACGAGAGTCATCCAAGTGGGTGAAAGAGGAAGACAG
TTACCAAACCTCCCAGAAGAGGGCGGAGAACGAGGACATAGAAGGGTTGATCGGGGAGGTGGGGTCAGTCTTCACCGACGAAATAATGGAAGGAGAGGTGCCGCACAAAT
TCAAAATACCAAACTTCCCGCAGTATGACAGGAAGAAGGATCCGAAGCAACACTTAGACGCAAACCAAACCTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTGC
CGAGCCTTTGCACTAATACTCACAGATTTAGCCAGGCAATGGTTTGGCAAGATACCCCGAAAGTCAATTGGTTCGTTCAGAGAGCTGGCCCGGTCGTTTGTTACGCAATT
TCTAGGAGCCCATAGCCGACAGAAGCCTCATATCAACCTGCTGACAGTGGAGGGTTACGACGATGGAGTTGCCTTGGCTGCTGTGATTTCAGGTTTACAGGATGAGAGAC
TGCTCAACTCAATCGAAGAGAGCCAACCGTGGACGTACGTGGAGTTTATGACCCGAGCGCAAAGATACATAAGCGCCGAGGAACTATTGAGATCCAAACAGGAAGAAAGA
GAGAGCTGGAGAGTGGCGATGTCAGATCGACATCGAGAAGACAGAGGAAAAAGGCACCAGGTCGAGGGAAGAGGTCAAATCCAACTTTCGGCCAATGGCCGAGGCCGACC
AGAGGCTAAGGAGCCGCAGGGCCGGGCGGAGCCAAAAGCTAGCTTCGACAAGTATACACCGCTAACAGCTTCGCGTTAG
Protein sequenceShow/hide protein sequence
MYTRNNDRKKLEARAKSEAEHDKTKRESSKWVKEEDSYQTSQKRAENEDIEGLIGEVGSVFTDEIMEGEVPHKFKIPNFPQYDRKKDPKQHLDANQTWMDFHGANEATRC
RAFALILTDLARQWFGKIPRKSIGSFRELARSFVTQFLGAHSRQKPHINLLTVEGYDDGVALAAVISGLQDERLLNSIEESQPWTYVEFMTRAQRYISAEELLRSKQEER
ESWRVAMSDRHREDRGKRHQVEGRGQIQLSANGRGRPEAKEPQGRAEPKASFDKYTPLTASR