; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001166 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001166
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:25876805..25877756
RNA-Seq ExpressionLag0001166
SyntenyLag0001166
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG69190.1 hypothetical protein EZV62_004125 [Acer yangbiense]2.3e-2836.63Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        +VFL E        + ++++LG+     VD  G SGG+ LLW  E+  +L+SYS  HID  V       WR TG YGHP +  +   W L++   G    
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLIMRKMG-------------EGLSRQG--SCSVSGRRW-MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT
        PW + GDF +   +  K+G             E L   G       G R+   NRR  E  + ER+DRC+GN  W D+FS + + HLDF + DHRPILL 
Subjt:  PWLMRGDFMQCCLIMRKMG-------------EGLSRQG--SCSVSGRRW-MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT

Query:  LS
        +S
Subjt:  LS

VFQ69070.1 unnamed protein product [Cuscuta campestris]5.4e-3033.61Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDG-GASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        +VFL ETK      + +K +LG+   F +DS+GRSGG+AL W  E K SLISYS NH+D  VD  G  PWRFTG YGHP+   +  +W L+K  +     
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDG-GASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLIMRKMG-------------EGLS-----RQGSCSVSGRRWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPIL
        PW++ GDF   C+   K G             E LS       G C      W   R+   D V ER+DR +    WR +F S+ ++++  +  DH  +L
Subjt:  PWLMRGDFMQCCLIMRKMG-------------EGLS-----RQGSCSVSGRRWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPIL

Query:  LTLSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDR
        L+ +           R ++    D G   +   ++  +W+R
Subjt:  LTLSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDR

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]5.1e-2834.12Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWV--DGGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFE
        MVFL ETK+     + ++ +LG   CF VD  G SGG+ALLW  E++  + S+S  H+D  +  + G + W FTG YG+P   L++ +W L++  +    
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWV--DGGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFE

Query:  TPWLMRGDFMQCCLIMRKMGEGLSRQ----------GSCSVSGRRW------MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILL
         PWL  GDF +      K G     Q            C ++   +       CN R G+ ++ ER+DRC+ N  W + F    V+HL  +  DH PILL
Subjt:  TPWLMRGDFMQCCLIMRKMGEGLSRQ----------GSCSVSGRRW------MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILL

Query:  TL-SVCARSVH
         L  V A+  H
Subjt:  TL-SVCARSVH

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]2.7e-2934.65Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDG--GASPWRFTGIYGHPQVKLKARTWALMKHPRGSFE
        ++FL ETK+ +   + ++VR+G+ CCF V+S+GR GG+ALLW  E+K S+ S+S  HID  + G  G   W+FTG+YGH +++ +  TW+L++  R    
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDG--GASPWRFTGIYGHPQVKLKARTWALMKHPRGSFE

Query:  TPWLMRGDFMQCCLIMRKMG-----EGL-----SRQGSCSV-----SGRRW-MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILL
         PWL+ GDF +      KMG     E L     S    C++      G+++  CNRR  + +V ER+DR +    W+  F    V H   +  DH PI+L
Subjt:  TPWLMRGDFMQCCLIMRKMG-----EGL-----SRQGSCSV-----SGRRW-MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILL

Query:  TLSVCARSVHNAGRRIQSRIANDIGLGD
          S       +   R+++    D   GD
Subjt:  TLSVCARSVHNAGRRIQSRIANDIGLGD

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]6.4e-3137.81Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDGGA--SPWRFTGIYGHPQVKLKARTWALMKHPRGSFE
        ++FL ETK+     + +K  LGY CCF V S GRSGG+AL+W  E   ++ SYS NHID  +        W+FTG+YGHP  +L+  TW  ++  RG+  
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDGGA--SPWRFTGIYGHPQVKLKARTWALMKHPRGSFE

Query:  TPWLMRGDFMQCCLIMRKMGEGLSRQ-----------GSCSVSGRRWM------CNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPIL
         PWL+ GDF +      K G G +R              CS     +M      CN+R  +  V ER+DR + N  W D F  + V H   +  DH PIL
Subjt:  TPWLMRGDFMQCCLIMRKMGEGLSRQ-----------GSCSVSGRRWM------CNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPIL

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A2N9FP20 Reverse transcriptase domain-containing protein1.1e-2832.37Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        ++FL ETK+     + ++++L +  CF V S GRSGG+ALLW  EV+ S+ ++S NHID  V   G   WRFTG YG+P    +  +WAL++  R   E 
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLI-------------MRKMGEGLSRQGSCSVSGRRWMC---NRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT
        PWL+ GDF +   +             M + GE L+R G   +  R +     N R  E  V +R+DR + +VAW  +F+   + HL  S  DH PILL 
Subjt:  PWLMRGDFMQCCLI-------------MRKMGEGLSRQGSCSVSGRRWMC---NRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT

Query:  LSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDRPG-MGNFRYRIWVATDQIQGALER-LGSVGSRYDLQNEE
          +   S  +  +R   +      L  E        WD+P  +G+  Y +     Q +  L R   S+ S +  + +E
Subjt:  LSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDRPG-MGNFRYRIWVATDQIQGALER-LGSVGSRYDLQNEE

A0A2N9G933 Reverse transcriptase domain-containing protein1.1e-2832.37Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        ++FL ETK+     + ++++L +  CF V S GRSGG+ALLW  EV+ S+ ++S NHID  V   G   WRFTG YG+P    +  +WAL++  R   E 
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLI-------------MRKMGEGLSRQGSCSVSGRRWMC---NRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT
        PWL+ GDF +   +             M + GE L+R G   +  R +     N R  E  V +R+DR + +VAW  +F+   + HL  S  DH PILL 
Subjt:  PWLMRGDFMQCCLI-------------MRKMGEGLSRQGSCSVSGRRWMC---NRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT

Query:  LSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDRPG-MGNFRYRIWVATDQIQGALER-LGSVGSRYDLQNEE
          +   S  +  +R   +      L  E        WD+P  +G+  Y +     Q +  L R   S+ S +  + +E
Subjt:  LSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDRPG-MGNFRYRIWVATDQIQGALER-LGSVGSRYDLQNEE

A0A2N9GKZ7 Uncharacterized protein1.9e-2835.75Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        ++FL ETK+     + ++V+LG+  CF V   GRSGG+ALLW    + ++ ++S NH+D  V     + WRFTG YGHP+   K  +W L+        T
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLIMRKMGEGL-------------SRQGSCSVSGR----RWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILL
        PWL  GDF +   I  + GE L             +R G   +  R     W  NRR GE ++ +R+DR + N AW D F+   V H+  S  DH P+LL
Subjt:  PWLMRGDFMQCCLIMRKMGEGL-------------SRQGSCSVSGR----RWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILL

Query:  TLSVCAR
         +    R
Subjt:  TLSVCAR

A0A484KUT5 Uncharacterized protein2.6e-3033.61Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDG-GASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        +VFL ETK      + +K +LG+   F +DS+GRSGG+AL W  E K SLISYS NH+D  VD  G  PWRFTG YGHP+   +  +W L+K  +     
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDG-GASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLIMRKMG-------------EGLS-----RQGSCSVSGRRWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPIL
        PW++ GDF   C+   K G             E LS       G C      W   R+   D V ER+DR +    WR +F S+ ++++  +  DH  +L
Subjt:  PWLMRGDFMQCCLIMRKMG-------------EGLS-----RQGSCSVSGRRWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPIL

Query:  LTLSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDR
        L+ +           R ++    D G   +   ++  +W+R
Subjt:  LTLSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKWDR

A0A5C7IIT4 Uncharacterized protein1.1e-2836.63Show/hide
Query:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET
        +VFL E        + ++++LG+     VD  G SGG+ LLW  E+  +L+SYS  HID  V       WR TG YGHP +  +   W L++   G    
Subjt:  MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVD-GGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFET

Query:  PWLMRGDFMQCCLIMRKMG-------------EGLSRQG--SCSVSGRRW-MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT
        PW + GDF +   +  K+G             E L   G       G R+   NRR  E  + ER+DRC+GN  W D+FS + + HLDF + DHRPILL 
Subjt:  PWLMRGDFMQCCLIMRKMG-------------EGLSRQG--SCSVSGRRW-MCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLT

Query:  LS
        +S
Subjt:  LS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCCTAGCAGAAACGAAAGTGCAGACGGTGACGTTTGATGTGCTTAAAGTTAGACTGGGGTATCCGTGCTGCTTCTGTGTGGATAGTAATGGGAGAAGTGGAGG
TATGGCGCTGTTGTGGACTACAGAGGTTAAGTTCAGTCTTATCTCGTATTCCTCTAATCATATAGACGGATGGGTGGATGGAGGGGCGAGCCCATGGAGATTCACAGGGA
TATACGGGCATCCTCAAGTGAAACTAAAGGCTAGAACGTGGGCATTGATGAAGCATCCCCGTGGGAGTTTTGAGACCCCGTGGCTTATGAGGGGTGATTTTATGCAGTGT
TGTTTGATCATGAGAAAGATGGGGGAAGGCCTCAGCCGGCAGGGGAGCTGCTCGGTTTCCGGGAGGCGGTGGATGTGCAATAGGAGACCTGGGGAGGATATTGTTTGGGA
GAGAATTGATAGGTGTATGGGTAATGTGGCATGGCGAGATATGTTCTCTAGTTATGAGGTGTGGCATCTGGATTTTAGTAGGTTGGATCATAGACCTATTCTCCTGACGT
TGTCGGTGTGTGCTCGTTCGGTTCATAATGCAGGTCGTAGAATCCAAAGTAGGATCGCCAACGACATTGGCCTCGGCGACGAAACGGTGCATAACAGTCTTAGGAAATGG
GATAGGCCAGGGATGGGAAATTTTAGGTATCGTATCTGGGTGGCGACGGATCAGATTCAGGGGGCGTTAGAACGGCTGGGCAGTGTGGGATCCCGATATGATCTACAGAA
TGAAGAAGACGCGACACGTTCTCCATCTGGTTTCTGCGCTGCTCTCTCCTTCTTATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCCTAGCAGAAACGAAAGTGCAGACGGTGACGTTTGATGTGCTTAAAGTTAGACTGGGGTATCCGTGCTGCTTCTGTGTGGATAGTAATGGGAGAAGTGGAGG
TATGGCGCTGTTGTGGACTACAGAGGTTAAGTTCAGTCTTATCTCGTATTCCTCTAATCATATAGACGGATGGGTGGATGGAGGGGCGAGCCCATGGAGATTCACAGGGA
TATACGGGCATCCTCAAGTGAAACTAAAGGCTAGAACGTGGGCATTGATGAAGCATCCCCGTGGGAGTTTTGAGACCCCGTGGCTTATGAGGGGTGATTTTATGCAGTGT
TGTTTGATCATGAGAAAGATGGGGGAAGGCCTCAGCCGGCAGGGGAGCTGCTCGGTTTCCGGGAGGCGGTGGATGTGCAATAGGAGACCTGGGGAGGATATTGTTTGGGA
GAGAATTGATAGGTGTATGGGTAATGTGGCATGGCGAGATATGTTCTCTAGTTATGAGGTGTGGCATCTGGATTTTAGTAGGTTGGATCATAGACCTATTCTCCTGACGT
TGTCGGTGTGTGCTCGTTCGGTTCATAATGCAGGTCGTAGAATCCAAAGTAGGATCGCCAACGACATTGGCCTCGGCGACGAAACGGTGCATAACAGTCTTAGGAAATGG
GATAGGCCAGGGATGGGAAATTTTAGGTATCGTATCTGGGTGGCGACGGATCAGATTCAGGGGGCGTTAGAACGGCTGGGCAGTGTGGGATCCCGATATGATCTACAGAA
TGAAGAAGACGCGACACGTTCTCCATCTGGTTTCTGCGCTGCTCTCTCCTTCTTATCCTGA
Protein sequenceShow/hide protein sequence
MVFLAETKVQTVTFDVLKVRLGYPCCFCVDSNGRSGGMALLWTTEVKFSLISYSSNHIDGWVDGGASPWRFTGIYGHPQVKLKARTWALMKHPRGSFETPWLMRGDFMQC
CLIMRKMGEGLSRQGSCSVSGRRWMCNRRPGEDIVWERIDRCMGNVAWRDMFSSYEVWHLDFSRLDHRPILLTLSVCARSVHNAGRRIQSRIANDIGLGDETVHNSLRKW
DRPGMGNFRYRIWVATDQIQGALERLGSVGSRYDLQNEEDATRSPSGFCAALSFLS