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Lag0001171 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001171
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioninactive poly [ADP-ribose] polymerase RCD1-like
Genome locationchr4:25978827..25983402
RNA-Seq ExpressionLag0001171
SyntenyLag0001171
Gene Ontology termsGO:0003950 - NAD+ ADP-ribosyltransferase activity (molecular function)
InterPro domainsIPR022003 - RST domain
IPR044964 - Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571640.1 Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3986.73Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

KAG7011369.1 Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3986.73Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

XP_022963963.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita moschata]4.3e-3986.73Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

XP_022967219.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita maxima]2.2e-3885.71Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

XP_023553913.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo]4.3e-3986.73Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

TrEMBL top hitse value%identityAlignment
A0A6J1E4V0 inactive poly [ADP-ribose] polymerase RCD1-like isoform X12.0e-3788.42Show/hide
Query:  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        EDCVSSPAP KRCT K  DHGSSSLKTPKSPWM FS LFNAISKEVSLNDMKLVNGHYGLFREKKI++DEFI RLRSIVGDPLLRSTL SLQCK+
Subjt:  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

A0A6J1ET05 inactive poly [ADP-ribose] polymerase RCD1-like4.0e-3880.39Show/hide
Query:  INALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQC
        +N   +++EDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV  HYGLFREKKI++DEFIRRLRSIVGDPLLRS L SL C
Subjt:  INALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQC

Query:  KL
        KL
Subjt:  KL

A0A6J1HJF2 inactive poly [ADP-ribose] polymerase RCD1-like isoform X12.1e-3986.73Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

A0A6J1HW58 inactive poly [ADP-ribose] polymerase RCD1-like isoform X11.0e-3885.71Show/hide
Query:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        +   EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V GHY LFREKKI++DEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  VVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

A0A6J1K3U5 inactive poly [ADP-ribose] polymerase RCD1-like4.0e-3880.39Show/hide
Query:  INALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQC
        +N   +++EDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV  HYGLFREKKI++DEFIRRLRSIVGDPLLRS L SL C
Subjt:  INALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQC

Query:  KL
        KL
Subjt:  KL

SwissProt top hitse value%identityAlignment
O82289 Probable inactive poly [ADP-ribose] polymerase SRO12.9e-0945.57Show/hide
Query:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVG-DPLLRSTLKSLQCKLG
        +  SSS + P+SP M F +LF AIS +++  DM L+   Y   REKK+++ EF + L  IVG D LL ST+  LQ  LG
Subjt:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVG-DPLLRSTLKSLQCKLG

Q8RY59 Inactive poly [ADP-ribose] polymerase RCD13.8e-1457.14Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N  Y   R+KK+ + EF+R+LR IVGD LLRST+ +LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ

Q9FJJ3 Probable inactive poly [ADP-ribose] polymerase SRO52.9e-0635.06Show/hide
Query:  CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKS
        C + P + + S K  +SPWM F +L  A+SK +  + + ++  HY   + ++I + E I+R+RSI GD LL   +K+
Subjt:  CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKS

Q9STU1 Probable inactive poly [ADP-ribose] polymerase SRO41.3e-0936.96Show/hide
Query:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++ HY   ++++I++ E I+RLRSI GD LL   +KS+  K+
Subjt:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL

Q9ZUD9 Probable inactive poly [ADP-ribose] polymerase SRO25.0e-0629Show/hide
Query:  SCFINALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKS
        SC +N+ ++ +   VS  +P  R +            P SPW+ F+ L + +S  +  + M L+   Y  FR++KI +D+ +R++R + GD LL   +K+
Subjt:  SCFINALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKS

Arabidopsis top hitse value%identityAlignment
AT1G32230.1 WWE protein-protein interaction domain protein family2.7e-1557.14Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N  Y   R+KK+ + EF+R+LR IVGD LLRST+ +LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ

AT1G32230.2 WWE protein-protein interaction domain protein family2.7e-1557.14Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N  Y   R+KK+ + EF+R+LR IVGD LLRST+ +LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ

AT1G32230.3 WWE protein-protein interaction domain protein family2.7e-1557.14Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N  Y   R+KK+ + EF+R+LR IVGD LLRST+ +LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQ

AT2G35510.1 similar to RCD one 12.0e-1045.57Show/hide
Query:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVG-DPLLRSTLKSLQCKLG
        +  SSS + P+SP M F +LF AIS +++  DM L+   Y   REKK+++ EF + L  IVG D LL ST+  LQ  LG
Subjt:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVG-DPLLRSTLKSLQCKLG

AT3G47720.1 similar to RCD one 49.1e-1136.96Show/hide
Query:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL
        C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++ HY   ++++I++ E I+RLRSI GD LL   +KS+  K+
Subjt:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRLRSIVGDPLLRSTLKSLQCKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGAACCTGCCAAAGGTTGAAGAAGGGAGGCTTCGAAGTTGCGGCGGCCAAAGGAAGGCCGAGGAAACAATCTTGTTTTATCAATGCCCTTGTAGTCAAAACTGA
GGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGT
TTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTCATTATGGCTTATTTAGAGAAAAGAAGATCAATAAGGACGAATTCATTAGAAGGCTG
AGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAAAGAGTCTCCAGTGCAAGCTTGGATGCATGAATGATTTCAACAAGGCTCCCCCTTTTTTGTATGGAAATGT
GAAGAACGTAGCGACAACGGGTCAGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTGTGTCACTGAACATCTTTTTCAGCGACATCGGGTCGGACGTTACTG
AAAGTGATCTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCGAACCTGCCAAAGGTTGAAGAAGGGAGGCTTCGAAGTTGCGGCGGCCAAAGGAAGGCCGAGGAAACAATCTTGTTTTATCAATGCCCTTGTAGTCAAAACTGA
GGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGT
TTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTCATTATGGCTTATTTAGAGAAAAGAAGATCAATAAGGACGAATTCATTAGAAGGCTG
AGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAAAGAGTCTCCAGTGCAAGCTTGGATGCATGAATGATTTCAACAAGGCTCCCCCTTTTTTGTATGGAAATGT
GAAGAACGTAGCGACAACGGGTCAGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTGTGTCACTGAACATCTTTTTCAGCGACATCGGGTCGGACGTTACTG
AAAGTGATCTTCAGTGA
Protein sequenceShow/hide protein sequence
MNRTCQRLKKGGFEVAAAKGRPRKQSCFINALVVKTEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGHYGLFREKKINKDEFIRRL
RSIVGDPLLRSTLKSLQCKLGCMNDFNKAPPFLYGNVKNVATTGQMLLKVYGFSDVLTVSLNIFFSDIGSDVTESDLQ