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Lag0001175 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001175
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTubulin-specific chaperone A
Genome locationchr4:26046540..26048026
RNA-Seq ExpressionLag0001175
SyntenyLag0001175
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5929883.1 hypothetical protein HYC85_000104 [Camellia sinensis]1.7e-0659.65Show/hide
Query:  FNRCTCQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
        FNR     + +L ++     ++  E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQV
Subjt:  FNRCTCQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
KAF5960772.1 hypothetical protein HYC85_001981 [Camellia sinensis]4.9e-0676.74Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQS
        E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQ+   ++LAA S
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQS
OMO60888.1 Tubulin binding cofactor A [Corchorus olitorius]2.9e-0663.46Show/hide
Query:  CQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
        C  + +L ++ P   +   E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQV
Subjt:  CQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
XP_022745790.1 tubulin-folding cofactor A-like [Durio zibethinus]2.2e-0693.75Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGADHYDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
XP_028100028.1 tubulin-folding cofactor A-like [Camellia sinensis]4.9e-0676.74Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQS
        E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQ+   ++LAA S
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQS
TrEMBL top hitse value%identityAlignment
A0A1R3GRY7 Tubulin-specific chaperone A1.4e-0663.46Show/hide
Query:  CQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
        C  + +L ++ P   +   E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQV
Subjt:  CQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
A0A6P5YZT8 Tubulin-specific chaperone A1.1e-0693.75Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGADHYDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
A0A7J7FP89 Tubulin-specific chaperone A8.1e-0759.65Show/hide
Query:  FNRCTCQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
        FNR     + +L ++     ++  E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQV
Subjt:  FNRCTCQCIGHLILRKPQIAQL--ELHSYEKEVEREAAKTANMKEKGADHYDLKQQV
A0A7J7HJY8 Tubulin-specific chaperone A3.1e-0688.57Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGA
        E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQV A
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGA
A0A7J7I6W3 Tubulin-specific chaperone A2.4e-0676.74Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQS
        E+HSYEKEVEREAAKTA+MKEKGAD YDLKQQ+   ++LAA S
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQS
SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A4.1e-0890.62Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
Arabidopsis top hitse value%identityAlignment
AT2G30410.1 tubulin folding cofactor A (KIESEL)2.9e-0990.62Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
AT2G30410.2 tubulin folding cofactor A (KIESEL)2.9e-0990.62Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTAATCGTTTTCGCCGCTCCCTTTTCACATCTCCTCCGCCCGCTGCCCGGAAAATCTCCTGCAAAGCGTTTGAGATCTCTGTGGCCGAGGAATCGTCGACATCT
GGTAACTGGGTCTCCTGCTGAAGGTGCTTACACTGAAGGCCTCATCAATGCCAAGCTAACGATGGTTGAGTTCTTCCCTTACCTTTTCTTTTATCTAATTTCTTTTGGTT
CTGCAGATTTTTTTTTCAATCGTTGTACTTGCCAATGCATTGGGCACTTGATTTTGAGAAAACCACAAATTGCCCAATTGGAGTTGCATTCTTATGAGAAGGAGGTAGAG
AGAGAAGCTGCCAAAACAGCTAACATGAAAGAAAAAGGAGCTGACCATTATGACCTTAAGCAACAGGTAGGTGCAGACATTGTTTTGGCTGCTCAGAGTCACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTAATCGTTTTCGCCGCTCCCTTTTCACATCTCCTCCGCCCGCTGCCCGGAAAATCTCCTGCAAAGCGTTTGAGATCTCTGTGGCCGAGGAATCGTCGACATCT
GGTAACTGGGTCTCCTGCTGAAGGTGCTTACACTGAAGGCCTCATCAATGCCAAGCTAACGATGGTTGAGTTCTTCCCTTACCTTTTCTTTTATCTAATTTCTTTTGGTT
CTGCAGATTTTTTTTTCAATCGTTGTACTTGCCAATGCATTGGGCACTTGATTTTGAGAAAACCACAAATTGCCCAATTGGAGTTGCATTCTTATGAGAAGGAGGTAGAG
AGAGAAGCTGCCAAAACAGCTAACATGAAAGAAAAAGGAGCTGACCATTATGACCTTAAGCAACAGGTAGGTGCAGACATTGTTTTGGCTGCTCAGAGTCACTTGTGA
Protein sequenceShow/hide protein sequence
MALIVFAAPFSHLLRPLPGKSPAKRLRSLWPRNRRHLVTGSPAEGAYTEGLINAKLTMVEFFPYLFFYLISFGSADFFFNRCTCQCIGHLILRKPQIAQLELHSYEKEVE
REAAKTANMKEKGADHYDLKQQVGADIVLAAQSHL