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Lag0001190 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001190
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr4:26280350..26280856
RNA-Seq ExpressionLag0001190
SyntenyLag0001190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035612.1 No apical meristem (NAM) protein [Cucumis melo var. makuwa]2.3e-1542.62Show/hide
Query:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        FSSL++ QY+QLM LLN +  A     IT  +++THT  I S  S+   S    WI+ S ASR +C+      NW   + + V+LP G  ++V+ IGDI 
Subjt:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLIS
         +  LLL DV++VP+F Y+LIS
Subjt:  FSDHLLLLDVIYVPKFTYNLIS

KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]9.6e-2242.76Show/hide
Query:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        FSSL++ QY+QLM LLN +  A     IT  +++THT GI +  S+   S    WI+DS ASR IC+      NW   + + V+LP G  ++V+ IGDI 
Subjt:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED
         +  L L DV++V +F YNLISVS LLI +++ ++F  + C I+D
Subjt:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED

KAA8523936.1 hypothetical protein F0562_010359 [Nyssa sinensis]4.5e-1137.31Show/hide
Query:  SLSTNQYTQLMELLNTY-AHATKVEAITAVSSVTHTVGIC-SFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        +L++NQY QLM +L+T+ + +TKV      S      GIC S +   + S +  WI+DS A+R IC++  +  +   +H   V LP    + V F GD+ 
Subjt:  SLSTNQYTQLMELLNTY-AHATKVEAITAVSSVTHTVGIC-SFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFI
            L+L DV++VP+F +NLISVS L+    L I
Subjt:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFI

XP_012833844.1 PREDICTED: uncharacterized protein LOC105954710 [Erythranthe guttata]3.4e-1131.82Show/hide
Query:  SLSTNQYTQLMELLNTYAHATKVEAITAV----------SSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMT
        S++ +Q  Q M + +++  A + ++  ++          ++V+   GIC+ +     S ++ WILDS AS+ IC+  +   N R V   +V+LP    + 
Subjt:  SLSTNQYTQLMELLNTYAHATKVEAITAV----------SSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMT

Query:  VEFIGDIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIEDR
        V F+GD+  S  + L  V YVP+F +NLISVS  L +   FI FS  +  I+D+
Subjt:  VEFIGDIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIEDR

XP_022856063.1 uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris]2.6e-1133.1Show/hide
Query:  SLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYL--IASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        SL+  QY QLM +L    H T  +  T     T+ V    F+  L    +    W++DS A+  IC    + ++ + +    V LP    + V F+G + 
Subjt:  SLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYL--IASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED
        FS++L+L DV+YVP F +NL+SVS L+ D ++ + F  + C I+D
Subjt:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED

TrEMBL top hitse value%identityAlignment
A0A151R5Y3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)3.7e-1141.49Show/hide
Query:  SNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED
        +NIWILDS A+  IC   +     RR+  +K+ LP G  +T    G I FS+   L DV+Y+P+F +NL+SVS L+      + FSG  C I+D
Subjt:  SNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED

A0A151T7D7 Retrotrans_gag domain-containing protein2.2e-1134.46Show/hide
Query:  STNQYTQLMELL---NTYAHATKVEAITAVSSVTH--TVGICSFNSYLIASKSNI--WILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIG
        S  Q+  L+ L+   N    A+    +  + SV+   T+GIC  NS + ++K ++  WILDS A+  + +   +  ++  +  I V LP G H+T    G
Subjt:  STNQYTQLMELL---NTYAHATKVEAITAVSSVTH--TVGICSFNSYLIASKSNI--WILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIG

Query:  DIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED
         + FS+ L L+DV+Y+P F +NLISVS L+      + FS SSC I++
Subjt:  DIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 84.6e-2242.76Show/hide
Query:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        FSSL++ QY+QLM LLN +  A     IT  +++THT GI +  S+   S    WI+DS ASR IC+      NW   + + V+LP G  ++V+ IGDI 
Subjt:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED
         +  L L DV++V +F YNLISVS LLI +++ ++F  + C I+D
Subjt:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIED

A0A5D3E5P0 No apical meristem (NAM) protein1.1e-1542.62Show/hide
Query:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        FSSL++ QY+QLM LLN +  A     IT  +++THT  I S  S+   S    WI+ S ASR +C+      NW   + + V+LP G  ++V+ IGDI 
Subjt:  FSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLIS
         +  LLL DV++VP+F Y+LIS
Subjt:  FSDHLLLLDVIYVPKFTYNLIS

A0A5J5A1K4 Retrotrans_gag domain-containing protein2.2e-1137.31Show/hide
Query:  SLSTNQYTQLMELLNTY-AHATKVEAITAVSSVTHTVGIC-SFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG
        +L++NQY QLM +L+T+ + +TKV      S      GIC S +   + S +  WI+DS A+R IC++  +  +   +H   V LP    + V F GD+ 
Subjt:  SLSTNQYTQLMELLNTY-AHATKVEAITAVSSVTHTVGIC-SFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGFHMTVEFIGDIG

Query:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFI
            L+L DV++VP+F +NLISVS L+    L I
Subjt:  FSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTCTAGTCCAAAGCAAGCTGAAACTAATGCTGTCTCTCAGCCTTAATAAAAAAAATTTCTCCAGTCTTAGCACAAATCAATACACTCAACTGATGGAACTCCT
TAATACTTATGCTCACGCTACTAAAGTTGAGGCAATTACTGCAGTGTCATCTGTCACGCATACTGTAGGTATTTGCTCCTTTAATTCTTATCTGATTGCATCTAAATCAA
ACATTTGGATTTTAGATTCCAGAGCATCTAGACCCATTTGTAATCGTTATGAGTCAATTCATAATTGGCGTCGAGTACATGGAATCAAAGTTGTTCTTCCAACTGGTTTT
CACATGACAGTTGAATTCATTGGGGACATTGGATTTTCAGATCATTTGTTGCTACTGGATGTTATTTATGTTCCAAAATTCACGTATAACCTCATATCCGTCAGCTATTT
ATTGATTGATCAAGACTTGTTCATTAACTTTTCTGGTTCATCTTGCACCATTGAGGACAGATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTCTAGTCCAAAGCAAGCTGAAACTAATGCTGTCTCTCAGCCTTAATAAAAAAAATTTCTCCAGTCTTAGCACAAATCAATACACTCAACTGATGGAACTCCT
TAATACTTATGCTCACGCTACTAAAGTTGAGGCAATTACTGCAGTGTCATCTGTCACGCATACTGTAGGTATTTGCTCCTTTAATTCTTATCTGATTGCATCTAAATCAA
ACATTTGGATTTTAGATTCCAGAGCATCTAGACCCATTTGTAATCGTTATGAGTCAATTCATAATTGGCGTCGAGTACATGGAATCAAAGTTGTTCTTCCAACTGGTTTT
CACATGACAGTTGAATTCATTGGGGACATTGGATTTTCAGATCATTTGTTGCTACTGGATGTTATTTATGTTCCAAAATTCACGTATAACCTCATATCCGTCAGCTATTT
ATTGATTGATCAAGACTTGTTCATTAACTTTTCTGGTTCATCTTGCACCATTGAGGACAGATGCTAA
Protein sequenceShow/hide protein sequence
MKPLVQSKLKLMLSLSLNKKNFSSLSTNQYTQLMELLNTYAHATKVEAITAVSSVTHTVGICSFNSYLIASKSNIWILDSRASRPICNRYESIHNWRRVHGIKVVLPTGF
HMTVEFIGDIGFSDHLLLLDVIYVPKFTYNLISVSYLLIDQDLFINFSGSSCTIEDRC