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Lag0001194 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001194
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr4:26425157..26425583
RNA-Seq ExpressionLag0001194
SyntenyLag0001194
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]5.4e-1535.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L + HL   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.6e-1435.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L +  L  AV ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.1e-1435.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L +  L  AV ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

TYK04516.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.1e-1434.44Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +L++L D NQP   GLS +VE+S  G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L +  L   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]5.4e-1535.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L + HL   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein2.6e-1535.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L + HL   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

A0A5A7TX42 Uncharacterized protein7.7e-1535.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L +  L  AV ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

A0A5A7TZN9 Putative mitochondrial protein1.0e-1434.44Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +L++L D NQP   GLS +VE+S  G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L +  L   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

A0A5D3C267 Putative mitochondrial protein1.0e-1434.44Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +L++L D NQP   GLS +VE+S  G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L +  L   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

A0A5D3D7V4 PMD domain-containing protein2.6e-1535.1Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW
        MV F E  +S   +LV+L D NQP   GLS +VE+   G                                               +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTG----------------------------------------------QMTLGRRIIDGSIRW

Query:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN
         +  K+  EF F   YWEWLELVVGR+  +L + HL   V ASLYTY+RN+
Subjt:  ESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGTTTTGCAGAACATATTGTCTCTGAAAAGACGTACCTCGTTCTCCTGAAAGACAACAATCAACCCATGAGAAGCGGACTCAGCTTCTTAGTAGAAGAGTCTAA
GACTGGACAGATGACGTTAGGGCGCCGAATAATTGATGGATCAATTCGTTGGGAATCCGCCTTGAAAATTTCAAGCGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGT
TGGAACTTGTCGTTGGTCGGAGTGAAGAGGTGCTTCAGACTGCTCATTTATTGGATGCAGTGGTGGCTTCCCTTTACACTTACAATCGAAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGTTTTGCAGAACATATTGTCTCTGAAAAGACGTACCTCGTTCTCCTGAAAGACAACAATCAACCCATGAGAAGCGGACTCAGCTTCTTAGTAGAAGAGTCTAA
GACTGGACAGATGACGTTAGGGCGCCGAATAATTGATGGATCAATTCGTTGGGAATCCGCCTTGAAAATTTCAAGCGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGT
TGGAACTTGTCGTTGGTCGGAGTGAAGAGGTGCTTCAGACTGCTCATTTATTGGATGCAGTGGTGGCTTCCCTTTACACTTACAATCGAAACAACTGA
Protein sequenceShow/hide protein sequence
MVCFAEHIVSEKTYLVLLKDNNQPMRSGLSFLVEESKTGQMTLGRRIIDGSIRWESALKISSEFLFIPRYWEWLELVVGRSEEVLQTAHLLDAVVASLYTYNRNN