; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001204 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001204
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr4:26520622..26522682
RNA-Seq ExpressionLag0001204
SyntenyLag0001204
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-5250.22Show/hide
Query:  EFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHRL
        + +K+ADV+F  +  S+IASH SP RF ATLQ+S   FT YS+   +S++ SL SFHDA+L    F S++ H+L++  Q  L ++  +     PPL   L
Subjt:  EFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHRL

Query:  PLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEGV-ETQFQIVLQPLSFFLLLSYKAE
        PLSP Q E L ++ +GKFF + S+ LR+++ ELP+  D++ V V  T ++VKFSIASKEI +TK+   C IVGYEG  ET+  I  +P+ FFL  +YKA 
Subjt:  PLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEGV-ETQFQIVLQPLSFFLLLSYKAE

Query:  RLWFYRTTNSHSVISLPAFGMYAQYVIYF
        R+WFY+TTNS SVIS+PAFGMY QYV+YF
Subjt:  RLWFYRTTNSHSVISLPAFGMYAQYVIYF

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]3.5e-4750.86Show/hide
Query:  ADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHRLPLSPS
        AD+KF P  F IIASH SP RF ATLQ+S  +FT +S+  +HS++ SL SFHDA+L    F S+T HLLD  NQ  L F T +      PL H L LSP 
Subjt:  ADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHRLPLSPS

Query:  QEE-------RLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGY-EGVETQFQIVLQPLSFFLLLSYK
        Q E        LD+    K+F++KS+ LRR++ +LPI Q++  + V +T+S+VKFSIASKEIILT + R C I G+ E VETQFQI+L P+ FFL  +YK
Subjt:  QEE-------RLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGY-EGVETQFQIVLQPLSFFLLLSYK

Query:  AERLWFYRT-TNSHSVISLPAFGMYAQYVIYF
        A R+WFY+T  N+++++ +PA+G++ QYVIYF
Subjt:  AERLWFYRT-TNSHSVISLPAFGMYAQYVIYF

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]2.5e-4550.22Show/hide
Query:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR
        A+ + EAD+KF    FS+I S+PS  RF AT QISH FF  YS+ RNHS+R SL+SF+DA+     F S+T H  +T ++  L F++S     T    HR
Subjt:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR

Query:  -LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYK
         L LSPSQEE L +I   +FF I S+D R ++  LP   +N  + V+LT S+VKF  AS+E ILTK+  +C I+GYEG  E  FQI L P  FF  LSY 
Subjt:  -LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYK

Query:  AERLWFYRTTNSHSVISLPAFGMYAQYVIYF
        A R+WFY+T +S  VI +PAFG+ AQYVIYF
Subjt:  AERLWFYRTTNSHSVISLPAFGMYAQYVIYF

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]7.0e-4848.4Show/hide
Query:  IDLKNDQRFLSWKQPPFAEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTL
        + LKN + F        A  A+EADVKF P  FSI  S+  P RF A L ++++ F  Y +  +H++R SL SFHDALL   G  S+T HLL  +NQ  L
Subjt:  IDLKNDQRFLSWKQPPFAEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTL

Query:  TFKTSTRLWRTPPLQHRLPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQF
         F++S+     P ++H L L PSQEE L +I + KFF I S+ LRRV+  LPI   +  +CVT T SQVKFSIASKEI+LTK++ +C IVGYEG  ET+ 
Subjt:  TFKTSTRLWRTPPLQHRLPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQF

Query:  QIVLQPLSFFLLLSYKAERLWFYRTTNSHSVISLPAFGMYAQYVIYFLPN
         I L P+ FFL  ++   R+WFY+TT  H  + +P+FG Y+QYVI F PN
Subjt:  QIVLQPLSFFLLLSYKAERLWFYRTTNSHSVISLPAFGMYAQYVIYFLPN

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]4.7e-5252.12Show/hide
Query:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR
        A+ +  ADVKF P  F +IA +PSP RF ATLQ+S   FT YS+   H+++  L SFHDA+L    F S+T HLL+  NQ  L F+T +     PPL H 
Subjt:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR

Query:  LPLSPSQ---EERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGY-EGVETQFQIVLQPLSFFLLLS
        L  SP Q        ++  GKFF++KSE LRR++ ELPI QD+  VCV +T SQ+KFSIASKEI+L  K + C IVG+ E VETQFQI+L+P+ FFL  +
Subjt:  LPLSPSQ---EERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGY-EGVETQFQIVLQPLSFFLLLS

Query:  YKAERLWFYRT-TNSHSVISLPAFGMYAQYVIYFLP
        YKA ++WFY+T  NS+SV+++PAFG+  QYVIYF P
Subjt:  YKAERLWFYRT-TNSHSVISLPAFGMYAQYVIYFLP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980102.5e-4351.49Show/hide
Query:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR
        A+ AK+ADVKF P    II S+ SP +F ATLQ+S   FT +S+  N S++ SL+ FHDA+L    F S+T HLLDT NQ  L F+T +     PPL H 
Subjt:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR

Query:  LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYKA
        L LSP Q E L ++ +G FF + S +LRR++ ELP+   +  V VT+T SQVKFSI SKEIILTK+   C IVGYEG VET+ Q+VL+P+ FFL  +Y+A
Subjt:  LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYKA

Query:  ER
         +
Subjt:  ER

A0A1S3CL88 uncharacterized protein LOC1035022501.7e-4750.86Show/hide
Query:  ADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHRLPLSPS
        AD+KF P  F IIASH SP RF ATLQ+S  +FT +S+  +HS++ SL SFHDA+L    F S+T HLLD  NQ  L F T +      PL H L LSP 
Subjt:  ADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHRLPLSPS

Query:  QEE-------RLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGY-EGVETQFQIVLQPLSFFLLLSYK
        Q E        LD+    K+F++KS+ LRR++ +LPI Q++  + V +T+S+VKFSIASKEIILT + R C I G+ E VETQFQI+L P+ FFL  +YK
Subjt:  QEE-------RLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGY-EGVETQFQIVLQPLSFFLLLSYK

Query:  AERLWFYRT-TNSHSVISLPAFGMYAQYVIYF
        A R+WFY+T  N+++++ +PA+G++ QYVIYF
Subjt:  AERLWFYRT-TNSHSVISLPAFGMYAQYVIYF

A0A6J1H2Z8 uncharacterized protein LOC1114600116.0e-4550.22Show/hide
Query:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR
        A+ + EAD+KF    FS+I S+PS  RF AT QISH FF  Y + RNHS+R SL+SF++A+ A   F S+T H  +T ++  L F++S     T    HR
Subjt:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR

Query:  -LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYK
         L LSPSQEE L +I   +FF I S+D R ++  LP   +N  + V+LT S+VKF  AS+E ILTK+  +C IVGYEG  E  FQI L P  FF  LSY 
Subjt:  -LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYK

Query:  AERLWFYRTTNSHSVISLPAFGMYAQYVIYF
        A R+WFY+T +S  VI +PAFG+ AQYVIYF
Subjt:  AERLWFYRTTNSHSVISLPAFGMYAQYVIYF

A0A6J1KIW5 uncharacterized protein LOC1114948745.6e-4344.59Show/hide
Query:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR
        A+ A+E+D+ F P +  +  S PSP RF ATLQI H  FT YS++ +H +R SL S HDALL      ++T HLL+  N   L F+T       P L+H 
Subjt:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR

Query:  LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYKA
          L P QE+ +++I + K   + S DLR+V+ ELP+   +  VCVT+T S+V+FSIAS+E+I  K+  +C I+G++G   T+F+IVL P+ FFL L+Y  
Subjt:  LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYKA

Query:  ERLWFYRT-TNSHSVISLPAFGMYAQYVIYF
        + +WF++T TN+H V+  P F ++AQYVIYF
Subjt:  ERLWFYRT-TNSHSVISLPAFGMYAQYVIYF

A0A6J1KZ05 uncharacterized protein LOC1114988871.2e-4550.22Show/hide
Query:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR
        A+ + EAD+KF    FS+I S+PS  RF AT QISH FF  YS+ RNHS+R SL+SF+DA+     F S+T H  +T ++  L F++S     T    HR
Subjt:  AEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTRLWRTPPLQHR

Query:  -LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYK
         L LSPSQEE L +I   +FF I S+D R ++  LP   +N  + V+LT S+VKF  AS+E ILTK+  +C I+GYEG  E  FQI L P  FF  LSY 
Subjt:  -LPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEG-VETQFQIVLQPLSFFLLLSYK

Query:  AERLWFYRTTNSHSVISLPAFGMYAQYVIYF
        A R+WFY+T +S  VI +PAFG+ AQYVIYF
Subjt:  AERLWFYRTTNSHSVISLPAFGMYAQYVIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAATCGATCTCAAGAATGATCAGAGGTTCCTCTCCTGGAAGCAACCTCCCTTCGCTGAATTTGCAAAGGAAGCCGACGTCAAATTCAAACCCTGGGCATTCTC
CATCATTGCCTCACACCCTTCCCCAGCTCGCTTCCATGCAACCCTCCAAATCTCTCACCATTTCTTCACCAAATACTCCCTCCATCGCAATCACAGCGCCAGGGCTTCCC
TTCGGTCCTTCCACGACGCTCTGTTGGCCGACCGAGGTTTCGATTCCATCACATTCCATCTTCTTGACACCCTAAACCAATTCACCCTCACCTTCAAGACTTCCACACGT
TTGTGGCGCACGCCGCCGTTGCAACATCGTTTGCCGTTGTCGCCTTCGCAAGAGGAGCGTTTGGACAAAATTGTATTCGGAAAGTTCTTCGTAATCAAATCGGAAGATTT
AAGGCGCGTTCTAATAGAACTGCCTATCCTCCAAGATAATATTCCTGTTTGTGTTACTCTAACGGATTCACAAGTCAAATTCTCTATTGCATCGAAAGAGATTATTCTTA
CCAAAAAGGATCGACAATGTACAATTGTAGGGTACGAGGGAGTTGAAACTCAGTTCCAAATCGTTCTTCAACCTTTGTCGTTTTTCCTTCTTTTATCATATAAAGCGGAG
AGGTTATGGTTTTATAGGACAACTAACTCTCATAGTGTAATTAGTCTTCCCGCTTTTGGAATGTATGCTCAATACGTGATCTATTTTCTCCCAAATGTGACACGCGGGAA
AATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAATCGATCTCAAGAATGATCAGAGGTTCCTCTCCTGGAAGCAACCTCCCTTCGCTGAATTTGCAAAGGAAGCCGACGTCAAATTCAAACCCTGGGCATTCTC
CATCATTGCCTCACACCCTTCCCCAGCTCGCTTCCATGCAACCCTCCAAATCTCTCACCATTTCTTCACCAAATACTCCCTCCATCGCAATCACAGCGCCAGGGCTTCCC
TTCGGTCCTTCCACGACGCTCTGTTGGCCGACCGAGGTTTCGATTCCATCACATTCCATCTTCTTGACACCCTAAACCAATTCACCCTCACCTTCAAGACTTCCACACGT
TTGTGGCGCACGCCGCCGTTGCAACATCGTTTGCCGTTGTCGCCTTCGCAAGAGGAGCGTTTGGACAAAATTGTATTCGGAAAGTTCTTCGTAATCAAATCGGAAGATTT
AAGGCGCGTTCTAATAGAACTGCCTATCCTCCAAGATAATATTCCTGTTTGTGTTACTCTAACGGATTCACAAGTCAAATTCTCTATTGCATCGAAAGAGATTATTCTTA
CCAAAAAGGATCGACAATGTACAATTGTAGGGTACGAGGGAGTTGAAACTCAGTTCCAAATCGTTCTTCAACCTTTGTCGTTTTTCCTTCTTTTATCATATAAAGCGGAG
AGGTTATGGTTTTATAGGACAACTAACTCTCATAGTGTAATTAGTCTTCCCGCTTTTGGAATGTATGCTCAATACGTGATCTATTTTCTCCCAAATGTGACACGCGGGAA
AATCTAG
Protein sequenceShow/hide protein sequence
MERIDLKNDQRFLSWKQPPFAEFAKEADVKFKPWAFSIIASHPSPARFHATLQISHHFFTKYSLHRNHSARASLRSFHDALLADRGFDSITFHLLDTLNQFTLTFKTSTR
LWRTPPLQHRLPLSPSQEERLDKIVFGKFFVIKSEDLRRVLIELPILQDNIPVCVTLTDSQVKFSIASKEIILTKKDRQCTIVGYEGVETQFQIVLQPLSFFLLLSYKAE
RLWFYRTTNSHSVISLPAFGMYAQYVIYFLPNVTRGKI