; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001215 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001215
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:26733564..26733920
RNA-Seq ExpressionLag0001215
SyntenyLag0001215
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]5.0e-2551.67Show/hide
Query:  MGGDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKW--
        +GGDFNEI  NSEK  G  R +SLMQ F++ +D+CGL+DPGF+G +FTWC+ H     IWERLDRFLIN  +       ++ HL  +AS+HRPILA+W  
Subjt:  MGGDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKW--

Query:  -KEEPPDQRAGKRYIKRFEE
          E    +R G+R   RFEE
Subjt:  -KEEPPDQRAGKRYIKRFEE

XP_023896927.1 uncharacterized protein LOC112008817 [Quercus suber]7.0e-1950.53Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPI
        GDFNEIT   EK+GGA+R E  MQ+FR+ +D+CGL D G+ G  FTWCN  +N  L+W RLDR +  V   DW   F   ++HHLP  +S+H+P+
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPI

XP_030923017.1 uncharacterized protein LOC115949892 [Quercus lobata]7.0e-1951.58Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPI
        GDFNEIT   EK+GGA+R E  MQ+FR+ +D+CGL D GF G  FTWCN  +N  L+W RLDR    V   DW   F   ++HHLP  +S+H+P+
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPI

XP_030930974.1 uncharacterized protein LOC115956830 [Quercus lobata]1.6e-1848.91Show/hide
Query:  DFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPIL
        DFNEI  ++EK+GG++RS+S MQ FR+++D CG +D GF+GP FTW  ++     +WERLDR L N ++       QVHHL   +S+HRP+L
Subjt:  DFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPIL

XP_030970102.1 uncharacterized protein LOC115990406 [Quercus lobata]3.1e-1951.58Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPI
        GDFNEIT   EK+GGA+R E  MQ+FR+ +D+CGL D GF G  FTWCN  +N  L+W RLDR +  V   DW   F   ++HHLP  +S+H+P+
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPI

TrEMBL top hitse value%identityAlignment
A0A2N9FVV5 Reverse transcriptase domain-containing protein2.2e-1842.98Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKWKEEP
        GDFNE+ S  EK GG  R+ES MQ FR+++D CG  D GF GP FTWCNN  N   +WE+LDR ++N +       ++VHH+    S+H P+   W    
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKWKEEP

Query:  PDQRAGKRYIKRFE
          +   +R + RFE
Subjt:  PDQRAGKRYIKRFE

A0A2N9H1U1 Reverse transcriptase domain-containing protein3.7e-1846.61Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPILAKWK
        GDFNE+ S  EK GG +RS   MQ+FR+ ID+CG +D G+ GP FTWCNN  +S  +WERLDR L  +    W N F   ++ HL    S+H PI    K
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPILAKWK

Query:  EEPPDQRAGKRYIKRFEE
              RA  R   RFEE
Subjt:  EEPPDQRAGKRYIKRFEE

A0A2N9IWN7 Uncharacterized protein2.9e-1844.92Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPILAKWK
        GDFNE+ S  EK GG +RS   MQ+FR+ ID CG  D G+ G  FTWCNN   +  +WERLDR L       W ++F   QVHHL  ++S+H PI  ++ 
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPILAKWK

Query:  EEPPDQRAGKRYIKRFEE
          P + R     I RF+E
Subjt:  EEPPDQRAGKRYIKRFEE

A0A2N9IXK4 RNase H domain-containing protein5.2e-2047.46Show/hide
Query:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPILAKWK
        GDFNE+ S  EK GG +RS   MQ+FR+ ID CG  D GF GP FTWCNN   S  +WERLDR L       W ++F   QV HL  ++S+H PI  ++ 
Subjt:  GDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVF---QVHHLPRIASNHRPILAKWK

Query:  EEPPDQRAGKRYIKRFEE
          P  +    R I RFEE
Subjt:  EEPPDQRAGKRYIKRFEE

A0A6J1DRA0 uncharacterized protein LOC1110224232.4e-2551.67Show/hide
Query:  MGGDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKW--
        +GGDFNEI  NSEK  G  R +SLMQ F++ +D+CGL+DPGF+G +FTWC+ H     IWERLDRFLIN  +       ++ HL  +AS+HRPILA+W  
Subjt:  MGGDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKW--

Query:  -KEEPPDQRAGKRYIKRFEE
          E    +R G+R   RFEE
Subjt:  -KEEPPDQRAGKRYIKRFEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGGACTTTAATGAGATTACTAGTAACAGTGAGAAGAATGGAGGTGCTTTGAGATCTGAGTCACTTATGCAGGAGTTCAGAGAGATTATAGATATTTGTGGTCT
CATTGACCCTGGTTTCATTGGTCCAATGTTCACTTGGTGCAACAATCATTTTAATAGTGACTTGATTTGGGAACGGTTAGATAGGTTTCTGATTAATGTTCAAATGCAAG
ATTGGTGCAATGTTTTCCAGGTTCACCATTTGCCACGAATAGCCTCAAACCATCGACCGATTCTTGCAAAATGGAAAGAAGAACCTCCAGATCAGAGAGCAGGGAAGAGA
TACATCAAGAGGTTTGAGGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGGACTTTAATGAGATTACTAGTAACAGTGAGAAGAATGGAGGTGCTTTGAGATCTGAGTCACTTATGCAGGAGTTCAGAGAGATTATAGATATTTGTGGTCT
CATTGACCCTGGTTTCATTGGTCCAATGTTCACTTGGTGCAACAATCATTTTAATAGTGACTTGATTTGGGAACGGTTAGATAGGTTTCTGATTAATGTTCAAATGCAAG
ATTGGTGCAATGTTTTCCAGGTTCACCATTTGCCACGAATAGCCTCAAACCATCGACCGATTCTTGCAAAATGGAAAGAAGAACCTCCAGATCAGAGAGCAGGGAAGAGA
TACATCAAGAGGTTTGAGGAAGCTTAG
Protein sequenceShow/hide protein sequence
MGGDFNEITSNSEKNGGALRSESLMQEFREIIDICGLIDPGFIGPMFTWCNNHFNSDLIWERLDRFLINVQMQDWCNVFQVHHLPRIASNHRPILAKWKEEPPDQRAGKR
YIKRFEEA