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Lag0001228 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001228
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:27224514..27224891
RNA-Seq ExpressionLag0001228
SyntenyLag0001228
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571728.1 hypothetical protein SDJN03_28456, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4584.13Show/hide
Query:  MAKSISTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSH-TSRRGATASPPTTLIEDIFEEIGDGA
        MAKSIS+CKNRRF+TS FS+SEIDVAIQL+HLSEDSDY  +  ASSTSCSDDKS ASATSATNAAGMEDDGSH +SRRGAT  P T+LIEDIFEEIGD +
Subjt:  MAKSISTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSH-TSRRGATASPPTTLIEDIFEEIGDGA

Query:  NRRRRKRRSRSVYEIYKLTKPVISVK
        NRRRRKRRSRSVYEIYKLTKP ISVK
Subjt:  NRRRRKRRSRSVYEIYKLTKPVISVK
KAG6588821.1 hypothetical protein SDJN03_17386, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3876.8Show/hide
Query:  MAKSISTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATASPPTTLIEDIFEEIGDGAN
        MA+S+ST +NRRFQTS FS+SEIDVAIQLIHLSEDSDYHD++ ASSTSCSDDKS ASA S +NA  MEDDG +  RRG   +P    IEDI+EEIGDGAN
Subjt:  MAKSISTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATASPPTTLIEDIFEEIGDGAN

Query:  RRRRKRRSRSVYEIYKLTKPVISVK
        RRRRKRRSRSVYEIYKLTKPVI VK
Subjt:  RRRRKRRSRSVYEIYKLTKPVISVK
TrEMBL top hitse value%identityAlignment
A0A5N6RSQ1 Uncharacterized protein5.5e-0440.16Show/hide
Query:  MAKSISTCKNRRFQTS---FFSESEIDVAIQLIHLSEDSD--YHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATASPPTTLIEDIFEEI
        MAKS   CK RR Q      FSESE+DVA QLI LS +SD  +H+D   ++TSC + K         N  G   D S T+         TT+ E   E+ 
Subjt:  MAKSISTCKNRRFQTS---FFSESEIDVAIQLIHLSEDSD--YHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATASPPTTLIEDIFEEI

Query:  GDGANRRRRKRRSRSVYEIYKLTKPVI
         +      RKRR RS+  +Y  TKPVI
Subjt:  GDGANRRRRKRRSRSVYEIYKLTKPVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCAATTTCCACCTGCAAAAATCGAAGATTCCAGACCTCCTTCTTCTCCGAATCTGAAATCGACGTCGCAATACAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACGACATCACCGCCTCCTCGACTAGTTGCAGCGACGACAAATCCTTCGCCTCCGCCACCAGCGCCACCAACGCCGCTGGAATGGAAGACGACGGAAGCCACA
CCAGCCGTCGCGGAGCCACGGCGTCGCCTCCAACCACTCTGATAGAAGACATCTTCGAAGAAATCGGAGACGGCGCGAATCGGAGGCGGAGGAAGCGCCGGTCGCGTTCG
GTTTACGAGATTTACAAATTGACGAAGCCTGTAATCTCCGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAATCAATTTCCACCTGCAAAAATCGAAGATTCCAGACCTCCTTCTTCTCCGAATCTGAAATCGACGTCGCAATACAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACGACATCACCGCCTCCTCGACTAGTTGCAGCGACGACAAATCCTTCGCCTCCGCCACCAGCGCCACCAACGCCGCTGGAATGGAAGACGACGGAAGCCACA
CCAGCCGTCGCGGAGCCACGGCGTCGCCTCCAACCACTCTGATAGAAGACATCTTCGAAGAAATCGGAGACGGCGCGAATCGGAGGCGGAGGAAGCGCCGGTCGCGTTCG
GTTTACGAGATTTACAAATTGACGAAGCCTGTAATCTCCGTGAAGTAA
Protein sequenceShow/hide protein sequence
MAKSISTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATASPPTTLIEDIFEEIGDGANRRRRKRRSRS
VYEIYKLTKPVISVK