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Lag0001231 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001231
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:27453478..27454044
RNA-Seq ExpressionLag0001231
SyntenyLag0001231
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]3.4e-1641.18Show/hide
Query:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA
        ++DC L DLGF G   T  NRR G+  V+ERIDR L++ AW +LFP   + HL ++ SDH+PLLLS ++  +  R   ++  +FE  WL+  +  +V+  
Subjt:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA

Query:  SW
        +W
Subjt:  SW

XP_023906330.1 uncharacterized protein LOC112018052 [Quercus suber]3.1e-1744.95Show/hide
Query:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSASWR
        C L DLGF+G+ FT  N RPG E V+ERIDR  +N  W +LFP   + HL  S SDH P+LL +  N    R      RRFEE W+ + + G ++  +WR
Subjt:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSASWR

Query:  SETPVSSPM
            V SPM
Subjt:  SETPVSSPM

XP_030964861.1 uncharacterized protein LOC115986145 [Quercus lobata]2.6e-1935.98Show/hide
Query:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA
        +E C L DLGFRG  +T  N+RPG+   R R+DR  +   W+E FP+  + HL    SDH P++L + ++ R +R  GQR  +FEETWL + +  EVV+A
Subjt:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA

Query:  SWRS------------ETPVSSPMELES-AASRSN--------VQQAMGRLGSS----ESQAELQRAEGQLESLLVEEEVYWRQRSRDS
        +WR             +  V    EL++   +RS+        +Q+ +  L S+    ES+A+      +L+ LL+++E+YW QRSR S
Subjt:  SWRS------------ETPVSSPMELES-AASRSN--------VQQAMGRLGSS----ESQAELQRAEGQLESLLVEEEVYWRQRSRDS

XP_042939411.1 uncharacterized protein LOC122274439 [Carya illinoinensis]2.6e-1640.78Show/hide
Query:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA
        +E+C L DLGF G  FT CNRR G + +  R+DR  SN  W  L+P+  + H   + SDH P++L ++   RV R  G+R+ RFE  W+++ D  ++V  
Subjt:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA

Query:  SWR
        +WR
Subjt:  SWR

XP_042944747.1 uncharacterized protein LOC122278633 [Carya illinoinensis]9.1e-1741.75Show/hide
Query:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA
        +E+C L DLGF G  FT CNRR G + + ER+DR  SN  W  L+P+  + H   + SDH P++L ++   RV R  G+R+ RFE  W+++ D  ++V  
Subjt:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA

Query:  SWR
        +WR
Subjt:  SWR

TrEMBL top hitse value%identityAlignment
A0A2N9IXX1 Reverse transcriptase domain-containing protein9.8e-1732.61Show/hide
Query:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSASWR
        C   DLGFRG  FT  NRR    ++++R+DR ++NV W +LF +  + H+  S SDH PL+L M  ++ + R   +R R+FEE W    D   V++ +W 
Subjt:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSASWR

Query:  SETPVSSPM------------------ELESAASRSNVQQAMGRL-------GSSESQAELQRAEGQLESLLVEEEVYWRQRSR
        + TP  SPM                  +  S   +  +Q+   +L        + E+ A +   +  + SLL+ EE++WRQRSR
Subjt:  SETPVSSPM------------------ELESAASRSNVQQAMGRL-------GSSESQAELQRAEGQLESLLVEEEVYWRQRSR

A0A7N2LLK4 Uncharacterized protein1.2e-1935.98Show/hide
Query:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA
        +E C L DLGFRG  +T  N+RPG+   R R+DR  +   W+E FP+  + HL    SDH P++L + ++ R +R  GQR  +FEETWL + +  EVV+A
Subjt:  MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSA

Query:  SWRS------------ETPVSSPMELES-AASRSN--------VQQAMGRLGSS----ESQAELQRAEGQLESLLVEEEVYWRQRSRDS
        +WR             +  V    EL++   +RS+        +Q+ +  L S+    ES+A+      +L+ LL+++E+YW QRSR S
Subjt:  SWRS------------ETPVSSPMELES-AASRSN--------VQQAMGRLGSS----ESQAELQRAEGQLESLLVEEEVYWRQRSRDS

A0A803KXJ5 Uncharacterized protein3.4e-1732.58Show/hide
Query:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNN-ARVVRSAGQRIRRFEETWLQSTDFGEVVSASW
        CEL D+GF G  +T  N R G++ V+ERIDR L+N  W+ELF    ++HL   +SDH PLLL +S +  +  +   +++ RFEE WL+    G++V+ +W
Subjt:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNN-ARVVRSAGQRIRRFEETWLQSTDFGEVVSASW

Query:  RSETPVSSPME------------------LESAASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSR
          E  + S +                    E    ++ ++  MG   + E  ++++  + +++ L   EE+YWRQRSR
Subjt:  RSETPVSSPME------------------LESAASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSR

A0A803L8S1 Uncharacterized protein9.8e-1732.4Show/hide
Query:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIR--RFEETWLQSTDFGEVVSAS
        C+L DLG+ G  FT  N R G E V+E++DR L+N AW+E FP   +THL   RSDH P+LL + +         +++R  RFEE WL+  +  ++V+++
Subjt:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIR--RFEETWLQSTDFGEVVSAS

Query:  WRSETPVSSPMELESA------------------ASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSR
        W     + S +   S                     R  ++  M    S E  A+++  + +++ L   EE+YW+QRSR
Subjt:  WRSETPVSSPMELESA------------------ASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSR

A0A803MKN4 Uncharacterized protein7.5e-1732.4Show/hide
Query:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSM--SNNARVVRSAGQRIRRFEETWLQSTDFGEVVSAS
        C+L DLGF G  FT  N R GEE ++ER+DR L+N AW++ F    +THL   +SDH P+LL +  +  ++  +   +R+ RFEE WL+  +  ++VS +
Subjt:  CELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSM--SNNARVVRSAGQRIRRFEETWLQSTDFGEVVSAS

Query:  WRSETPVSSPMELESA------------------ASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSR
        W     + S +   S                   A ++ ++   G + S+E  A+++  + +++ L   EE+YW+QRSR
Subjt:  WRSETPVSSPMELESA------------------ASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACTGCGAGCTGTTTGATTTGGGTTTTAGGGGGGCTGTCTTCACTTTGTGTAATAGGAGGCCGGGGGAGGAAGTAGTTAGGGAGAGGATTGACAGATGTCTGAG
TAATGTTGCTTGGCAGGAGTTATTTCCCGTGCATGAGTTGACACACCTGGACTTTAGTCGATCAGACCACAAGCCTCTTTTGCTCTCGATGTCAAATAATGCCCGGGTGG
TTCGTAGTGCAGGGCAGAGGATTCGGAGGTTTGAGGAAACTTGGCTCCAGTCCACTGATTTTGGGGAGGTAGTTTCAGCAAGTTGGAGGTCTGAGACTCCCGTTAGCTCG
CCTATGGAGTTGGAATCAGCAGCTTCCCGGTCAAATGTCCAACAGGCGATGGGTAGGTTGGGTTCTTCTGAATCCCAAGCAGAACTACAGAGGGCAGAAGGGCAGCTAGA
ATCTCTTCTTGTGGAGGAGGAGGTGTACTGGAGGCAGAGGTCTCGAGATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACTGCGAGCTGTTTGATTTGGGTTTTAGGGGGGCTGTCTTCACTTTGTGTAATAGGAGGCCGGGGGAGGAAGTAGTTAGGGAGAGGATTGACAGATGTCTGAG
TAATGTTGCTTGGCAGGAGTTATTTCCCGTGCATGAGTTGACACACCTGGACTTTAGTCGATCAGACCACAAGCCTCTTTTGCTCTCGATGTCAAATAATGCCCGGGTGG
TTCGTAGTGCAGGGCAGAGGATTCGGAGGTTTGAGGAAACTTGGCTCCAGTCCACTGATTTTGGGGAGGTAGTTTCAGCAAGTTGGAGGTCTGAGACTCCCGTTAGCTCG
CCTATGGAGTTGGAATCAGCAGCTTCCCGGTCAAATGTCCAACAGGCGATGGGTAGGTTGGGTTCTTCTGAATCCCAAGCAGAACTACAGAGGGCAGAAGGGCAGCTAGA
ATCTCTTCTTGTGGAGGAGGAGGTGTACTGGAGGCAGAGGTCTCGAGATAGCTAG
Protein sequenceShow/hide protein sequence
MEDCELFDLGFRGAVFTLCNRRPGEEVVRERIDRCLSNVAWQELFPVHELTHLDFSRSDHKPLLLSMSNNARVVRSAGQRIRRFEETWLQSTDFGEVVSASWRSETPVSS
PMELESAASRSNVQQAMGRLGSSESQAELQRAEGQLESLLVEEEVYWRQRSRDS