; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001244 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001244
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr4:27644583..27647794
RNA-Seq ExpressionLag0001244
SyntenyLag0001244
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047393.1 protein Ycf2-like [Cucumis melo var. makuwa]3.4e-0628.46Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL
        +++K +   +  LE+ PM+AT  +MGM +F PF++ E +  +E E+EL K K+  ++ ++ LNR  P+  E + +R  ++ IENN  ++++  +E I   
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL

Query:  VNCLKTKWMIMDEDASHDLYKELEELEEEQ
        + C++ K     E+    +   +E +  +Q
Subjt:  VNCLKTKWMIMDEDASHDLYKELEELEEEQ

KAA0062455.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-0432.63Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIE
        +++K +   +  LE+ PM+AT  E+ M +F PF++ E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IEN+  R    V E
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIE

TYK13893.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-0429.75Show/hide
Query:  LEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSLVNCLKTKW-MIM
        LE+ PM AT +E+G+ +F PF++ E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IE    ++++  +E I   +  ++ K     
Subjt:  LEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSLVNCLKTKW-MIM

Query:  DEDASHDLYKELEELEEEQKE
        +E  +    K L+++EE+Q+E
Subjt:  DEDASHDLYKELEELEEEQKE

TYK23192.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-0427.82Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL
        +++K +   +  LE+ PM+AT +E+GM +F PF + E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IE +  ++++  +E +   
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL

Query:  VNCLKTKWMIMDEDASHDLYKE-LEELEEEQKE
        +  ++ K     E+     ++E L+++EE+Q+E
Subjt:  VNCLKTKWMIMDEDASHDLYKE-LEELEEEQKE

TYK27429.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-0432.63Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIE
        +++K +   +  LE+ PM+AT  E+ M +F PF++ E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IEN+  R    V E
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIE

TrEMBL top hitse value%identityAlignment
A0A5D3CEX9 Protein Ycf2-like2.0e-0427.82Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL
        +++K +   +  LE+ PM+AT +E+GM +F PF + E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IE +  ++++  +E +   
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL

Query:  VNCLKTKWMIMDEDASHDLYKE-LEELEEEQKE
        +  ++ K     E+     ++E L+++EE+Q+E
Subjt:  VNCLKTKWMIMDEDASHDLYKE-LEELEEEQKE

A0A5D3CPV6 Protein Ycf2-like6.9e-0529.75Show/hide
Query:  LEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSLVNCLKTKW-MIM
        LE+ PM AT +E+G+ +F PF++ E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IE    ++++  +E I   +  ++ K     
Subjt:  LEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSLVNCLKTKW-MIM

Query:  DEDASHDLYKELEELEEEQKE
        +E  +    K L+++EE+Q+E
Subjt:  DEDASHDLYKELEELEEEQKE

A0A5D3CRP6 Protein Ycf2-like1.6e-0628.46Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL
        +++K +   +  LE+ PM+AT  +MGM +F PF++ E +  +E E+EL K K+  ++ ++ LNR  P+  E + +R  ++ IENN  ++++  +E I   
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL

Query:  VNCLKTKWMIMDEDASHDLYKELEELEEEQ
        + C++ K     E+    +   +E +  +Q
Subjt:  VNCLKTKWMIMDEDASHDLYKELEELEEEQ

A0A5D3DCN3 Protein Ycf2-like3.4e-0424.67Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL
        +++K +   ++ LE+ PM+AT +E+GM +F PF++ E +  +E E+EL K K+  ++ +++LN+  P+  E + +R  ++ IE +  ++++  +E++   
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL

Query:  VNCLKTKWMIMDEDASHDLYKELEELEEEQK--ELEHEKEFPENADDPKI
        + C++ K      +   +L +++  + E  K  E    + F E+ D  ++
Subjt:  VNCLKTKWMIMDEDASHDLYKELEELEEEQK--ELEHEKEFPENADDPKI

A0A5D3DHZ2 Protein Ycf2-like9.0e-0527.82Show/hide
Query:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL
        +++K +   +  LE+ PM+AT +E+GM +F PF + E +  +E E+EL K K+  ++ +++LNR  P+  E + +R  ++ IE +  ++++  +E +   
Subjt:  ENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENELTKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSL

Query:  VNCLKTKWMIMDEDASHDLYKE-LEELEEEQKE
        +  ++ K     E+     ++E L+++EE+Q+E
Subjt:  VNCLKTKWMIMDEDASHDLYKE-LEELEEEQKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTAATAATTGCAACTTTAATTCTGAAGGGAGAAGATGAAGAAGAGCAACCTGAGGAGAAGGATCATTCGAAAATGATTGAGGATGGTGAAGAAGAAAGTTCAAA
GAAACTTTCAAAAACTGAGAAGAGAAACTCCGGTGAAGACAAATCTGAAATGCAAACTGGTGAAGAAACTCCTACCGAGAATATGAAGAATGAGAGAATTCGAGCAATTA
AGTTGGAGATATACCCTATGATTGCTACTGAGGAGGAAATGGGAATGGCTTACTTTAATCCTTTTGTTGATAAGGAGATTGAGTTTAGAAGGGAGTTGGAGAATGAGCTA
ACAAAGCAGAAGTCTGGCGCCAATCTAATAAATTTAACTTTGAATAGATCGACACCAACTATACTTGAAAATTCTTACATAAGAGATAGACTAGACTCCATAGAGAATAA
CCTCAACAGAAAATTAGATCAAGTGATAGAAACAATCAATTCATTGGTGAATTGTCTTAAAACAAAATGGATGATAATGGACGAAGATGCGAGCCATGATTTATACAAGG
AGTTGGAAGAGTTGGAGGAAGAACAAAAAGAGCTGGAACATGAGAAAGAGTTTCCTGAAAATGCAGACGACCCAAAGATCAAAAGTGTGACGCCCGAGAAGCGGTTTAAG
ACGAGTATGGTGACGTCGTCAGACCATCAGGGATGTAGGGAATGTCGGGGTCGTGAGGTGTCGAATCCAGATTCCGAATCCTGGGCTTGGGGTGTTACAAAAGGCAGAAG
GGATGATGATGATGAGGAGGACCCTTCAGGCCAACCACAACAGACGTCACTGCTAGGTGCCTCTATTATCTCCCTCTTACAGACTAAACGAGGAGAAGAAAAAGCCCAAG
GGAAAGATGATCAAAACCAAGGGAAAAATACAGATGTCAAGGATGAATCTGACATATGTATGGGAGTCGGAACATTGATAAACAGAGGACCAGTTGCAAAAAGAGCAAGA
AAACTGACATTCGAAGCTGAGCCAAAGGATAAGGGACAAACAAGTTCTAAAAAGAAACACTTCATTCCACCACGACATGAATTGGGAAGACCAAGGAAGTTATTTATAGG
AAAGAGTCCTGAGGTGAAGAGAGCAAAGGATAAGTCTAAACAAAGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTAATAATTGCAACTTTAATTCTGAAGGGAGAAGATGAAGAAGAGCAACCTGAGGAGAAGGATCATTCGAAAATGATTGAGGATGGTGAAGAAGAAAGTTCAAA
GAAACTTTCAAAAACTGAGAAGAGAAACTCCGGTGAAGACAAATCTGAAATGCAAACTGGTGAAGAAACTCCTACCGAGAATATGAAGAATGAGAGAATTCGAGCAATTA
AGTTGGAGATATACCCTATGATTGCTACTGAGGAGGAAATGGGAATGGCTTACTTTAATCCTTTTGTTGATAAGGAGATTGAGTTTAGAAGGGAGTTGGAGAATGAGCTA
ACAAAGCAGAAGTCTGGCGCCAATCTAATAAATTTAACTTTGAATAGATCGACACCAACTATACTTGAAAATTCTTACATAAGAGATAGACTAGACTCCATAGAGAATAA
CCTCAACAGAAAATTAGATCAAGTGATAGAAACAATCAATTCATTGGTGAATTGTCTTAAAACAAAATGGATGATAATGGACGAAGATGCGAGCCATGATTTATACAAGG
AGTTGGAAGAGTTGGAGGAAGAACAAAAAGAGCTGGAACATGAGAAAGAGTTTCCTGAAAATGCAGACGACCCAAAGATCAAAAGTGTGACGCCCGAGAAGCGGTTTAAG
ACGAGTATGGTGACGTCGTCAGACCATCAGGGATGTAGGGAATGTCGGGGTCGTGAGGTGTCGAATCCAGATTCCGAATCCTGGGCTTGGGGTGTTACAAAAGGCAGAAG
GGATGATGATGATGAGGAGGACCCTTCAGGCCAACCACAACAGACGTCACTGCTAGGTGCCTCTATTATCTCCCTCTTACAGACTAAACGAGGAGAAGAAAAAGCCCAAG
GGAAAGATGATCAAAACCAAGGGAAAAATACAGATGTCAAGGATGAATCTGACATATGTATGGGAGTCGGAACATTGATAAACAGAGGACCAGTTGCAAAAAGAGCAAGA
AAACTGACATTCGAAGCTGAGCCAAAGGATAAGGGACAAACAAGTTCTAAAAAGAAACACTTCATTCCACCACGACATGAATTGGGAAGACCAAGGAAGTTATTTATAGG
AAAGAGTCCTGAGGTGAAGAGAGCAAAGGATAAGTCTAAACAAAGCCTTTGA
Protein sequenceShow/hide protein sequence
MNLIIATLILKGEDEEEQPEEKDHSKMIEDGEEESSKKLSKTEKRNSGEDKSEMQTGEETPTENMKNERIRAIKLEIYPMIATEEEMGMAYFNPFVDKEIEFRRELENEL
TKQKSGANLINLTLNRSTPTILENSYIRDRLDSIENNLNRKLDQVIETINSLVNCLKTKWMIMDEDASHDLYKELEELEEEQKELEHEKEFPENADDPKIKSVTPEKRFK
TSMVTSSDHQGCRECRGREVSNPDSESWAWGVTKGRRDDDDEEDPSGQPQQTSLLGASIISLLQTKRGEEKAQGKDDQNQGKNTDVKDESDICMGVGTLINRGPVAKRAR
KLTFEAEPKDKGQTSSKKKHFIPPRHELGRPRKLFIGKSPEVKRAKDKSKQSL